Gvermi5850.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5850.t2 vs. uniprot
Match: A0A2V3IFB2_9FLOR (Protein LSM12-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFB2_9FLOR) HSP 1 Score: 263 bits (671), Expect = 2.370e-87 Identity = 125/180 (69.44%), Postives = 146/180 (81.11%), Query Frame = 0
Query: 1 MDARPQPGMSFEVGKPIAVHLSDGSLLRGFVHAEDRGAGLLCLELIPSAQIALVPLVNVKSVAPFPHPAESRKWPSNFPLDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAISGHAAAVERVQMVLTREAHRITSVADANGVKP 180
MDARPQPGM FEVGKPIA+ L+DGS LRGFVHAED+GA LLCLELIPSA++ALV +VN+KS +P A++RKWPSNF +DL KLR +ERR EK E EF++LGVGVSP AQA+FD LAKTM C WDG+DILILD+VRLAPPY K +SG VERV+M+L EAH I + DANGVKP
Sbjct: 1 MDARPQPGMKFEVGKPIAIQLNDGSFLRGFVHAEDKGAALLCLELIPSAKVALVSIVNIKSASPLTQIADTRKWPSNFHIDLAKLRAEERRICEKREAEFNKLGVGVSPSAQAIFDTLAKTMPCKWDGEDILILDTVRLAPPYNAKCLSGDTGVVERVKMILENEAHSIRNATDANGVKP 180
BLAST of Gvermi5850.t2 vs. uniprot
Match: R7QH47_CHOCR (LSM12 homolog n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH47_CHOCR) HSP 1 Score: 183 bits (465), Expect = 3.010e-56 Identity = 88/170 (51.76%), Postives = 117/170 (68.82%), Query Frame = 0
Query: 9 MSFEVGKPIAVHLSDGSLLRGFVHAEDRGAGLLCLELIPSAQIALVPLVNVKSVAPFPHPAESRKWPSNFPLDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAISGHAAAVERVQMVLTREAHRITSVADANGV 178
M+FEVGKP++V L DG+ L+GFVHAED AGL+CLELIPSA + L+P+ NVKS P P A+SRKWP+N +DL +L+ ++ R + K EF+ +GVGV+P QAVFDVLAKT+ C W+G I++ +VRL PPY +K+I RV+MVL R + NGV
Sbjct: 1 MAFEVGKPLSVQLVDGTALKGFVHAEDAAAGLVCLELIPSADLTLLPISNVKSATPIPDLADSRKWPANLDVDLPRLKAEQERIFRKRHIEFTHIGVGVTPEGQAVFDVLAKTLPCEWEGNVIVVFGTVRLGPPYDIKSI--------RVRMVLERRTRTPRPAEETNGV 162
BLAST of Gvermi5850.t2 vs. uniprot
Match: A0A2P6U0H0_CHLSO (LSM12-like protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U0H0_CHLSO) HSP 1 Score: 81.6 bits (200), Expect = 2.940e-16 Identity = 45/117 (38.46%), Postives = 67/117 (57.26%), Query Frame = 0
Query: 56 LVNVKSVAPFPHPAESRKWPSNFPLDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPY-TVKAISGHAAAVERVQMVLTREAHRITS 171
+ N+ + P PAE +DLQ+ R E + E E +++GVGV+ AQ +FD LAKT+ C WDG+ I++LD + ++PPY T ++ G AA RV+ VL E R+ S
Sbjct: 58 VTNILQLKPAAGPAEPLP-----AVDLQRCREREDKAVRAAEAEAAKIGVGVTRQAQVIFDALAKTLPCRWDGERIVVLDEIVVSPPYETCTSLHGDDAAAARVKKVLEAERQRLQS 169
BLAST of Gvermi5850.t2 vs. uniprot
Match: A0A2R6P3K0_ACTCC (AD domain-containing protein n=4 Tax=Actinidia TaxID=3624 RepID=A0A2R6P3K0_ACTCC) HSP 1 Score: 80.1 bits (196), Expect = 1.460e-15 Identity = 57/178 (32.02%), Postives = 90/178 (50.56%), Query Frame = 0
Query: 1 MDARPQPGMSFEVGKPIAVHLSDGSLLRGFVHAEDRGAGLLCLE------LIPSAQIALVPLVNVKSVAPFPHPAESRKWPSNFPLDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAISGHA-AAVERVQMVLTREAHRITS 171
MDA G F VG +++ + G G + DR + +L L+ P I L+ +K + + AE LDL L+ E + E E +LGVGV+P+AQ++FD L+KT+ WD I++++ VR++ PY ++++G AA ERV+ VL E R+ S
Sbjct: 1 MDANSFGGEEFAVGCILSIKTTLGDEFDGQIITFDRPSNILVLQEGIKSVSGPRRNIRLLKANYIKEFS-YLGQAEDPLNSKKCYLDLSALQAREESAIRQAEIEAERLGVGVTPVAQSIFDALSKTLPVRWDKTAIVVMNEVRVSSPYLPESVAGGTPAANERVRKVLELERKRLQS 177
BLAST of Gvermi5850.t2 vs. uniprot
Match: A0A2V0NSF4_9CHLO (AD domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NSF4_9CHLO) HSP 1 Score: 79.3 bits (194), Expect = 3.120e-15 Identity = 52/178 (29.21%), Postives = 93/178 (52.25%), Query Frame = 0
Query: 8 GMSFEVGKPIAVHLSDGSLLRGFVHAEDRGAGLLCLELIPS----------AQIALVPLVNVKSVAPFPHPAESRKWPSNFPLDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAIS------GHAAAVERVQMVLTREAHRI 169
G + +G + + + + G V A D L L+ + A+ A+ LV+ + P HP E + N +D ++ RL E + ++ E + +++GVGV+ AQ++FD L+KT+ C W G+DI++++SV + PPY ++ + G A+ER++ VLT E R+
Sbjct: 13 GSQWAIGCKVTIRTTFDEEVTGTVFAYDAATDSLVLQQAGTHGGVNNLRLYAKAAIKELVSAE---PPSHPPEL--FLPN--VDRERARLREEKALKQAEADLAKVGVGVTREAQSIFDALSKTLPCAWRGRDIIVMESVVVPPPYNPESCAARGGGAGEGGALERIRRVLTAERSRL 183
BLAST of Gvermi5850.t2 vs. uniprot
Match: A0A7R9WKN5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WKN5_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 7.520e-14 Identity = 46/130 (35.38%), Postives = 66/130 (50.77%), Query Frame = 0
Query: 23 DGSLLRGFVHAEDRGAGLLCLELIPSAQIALVPLVNVKSVAP--FPHPAESRKWPSNFPLDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAISG 150
D S FV A + + +I ++ I + +V + P PH ++ R + D R EK SQ+GV V+P AQ+VFD L KT C WDGK I++LD+ R+APPYT ++ SG
Sbjct: 44 DASSTAVFVQAIEHTTIKSTIRMIKNSSIKEIKIVGPPTAPPAALPHISKDR---------VHGREADRRGVAEKRA---SQIGVDVTPEAQSVFDALVKTYPCHWDGKTIVVLDTTRVAPPYTAESCSG 161
BLAST of Gvermi5850.t2 vs. uniprot
Match: C1MT91_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MT91_MICPC) HSP 1 Score: 74.3 bits (181), Expect = 1.950e-13 Identity = 49/171 (28.65%), Postives = 84/171 (49.12%), Query Frame = 0
Query: 13 VGKPIAVHLSDGSLLRGFVHAEDRGAGLLCL----ELIPSAQIALVPLVNVKSVAPFPHPAESRKWPSNFPLDLQKLRL-DERRTYEKHEHEF-------SQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYT--VKAISGHAAAVERVQMVLTREAHRI 169
+G ++ + G G V D G GL L +++ + + ++ V + + P + P ++KL + DE R ++ E + +GV V+ AQ +FD LA+T+ C W+G+ I++LD V+++PPY V +G AVERVQ VL E ++
Sbjct: 8 IGHVVSGVTATGEKFAGEVFTFDEGTGLAVLRAKGDIVNTHDVRILRAEGVSDL---------KSTPPSDPPKMEKLPVVDEARCQKREEAAVKAATISAANIGVDVTAEAQDIFDALARTLPCRWEGRSIVVLDEVKISPPYAECVGVATGDPRAVERVQKVLAMEKSKL 169
BLAST of Gvermi5850.t2 vs. uniprot
Match: E1ZJ68_CHLVA (AD domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJ68_CHLVA) HSP 1 Score: 73.6 bits (179), Expect = 3.750e-13 Identity = 39/91 (42.86%), Postives = 54/91 (59.34%), Query Frame = 0
Query: 80 LDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPY-TVKAISGHAAAVERVQMVLTREAHRI 169
+DL + R E + E E +++GV VS AQA+FD LAKT+ C WDG I++LD + +APPY T ++ A V RV VL E R+
Sbjct: 80 VDLGRCREREDKAVRAAESEAAKIGVNVSRQAQAIFDALAKTLPCRWDGDRIVVLDEIVVAPPYETCTSLHNDDAGVMRVSKVLDAERLRL 170
BLAST of Gvermi5850.t2 vs. uniprot
Match: S8A436_DACHA (AD domain-containing protein n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8A436_DACHA) HSP 1 Score: 73.6 bits (179), Expect = 1.210e-12 Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 0
Query: 79 PLDLQKLRLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAIS---GHAAAVERVQMVLTREAHRITSVADANGVKP 180
P++LQ +R E+ + + GVGVS QA++ L+KTM C W GK I++LD+V + PYTV+ S G+ A+ RV+ VL E R+ V +N P
Sbjct: 127 PINLQAMRNREQAALKLEYEKMLGHGVGVSEEGQAIYTALSKTMPCRWQGKHIIVLDTVIIQEPYTVEKCSSPQGNENALARVKKVLEGERKRLNPVQRSNASTP 231
BLAST of Gvermi5850.t2 vs. uniprot
Match: D2VQR9_NAEGR (AD domain-containing protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VQR9_NAEGR) HSP 1 Score: 72.0 bits (175), Expect = 8.020e-12 Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 0
Query: 86 RLDERRTYEKHEHEFSQLGVGVSPLAQAVFDVLAKTMQCTWDGKDILILDSVRLAPPYTVKAISGHAAAVERVQMVLTREAHRITS 171
R +E YE+ E +LG VS AQA+FD ++KT+ C+W GK IL++DS+ ++PPY V +SG +RVQ +L +I S
Sbjct: 207 RREENAIYERRE----RLGSNVSSEAQAIFDTMSKTVPCSWKGKQILVMDSISISPPYGVDNVSGSGNERKRVQNLLQIAYEKIKS 288 The following BLAST results are available for this feature:
BLAST of Gvermi5850.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5850.t2 ID=Gvermi5850.t2|Name=Gvermi5850.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=181bpback to top |