Gvermi5830.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5830.t1
Unique NameGvermi5830.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length67
Homology
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BLAST of Gvermi5830.t1 vs. uniprot
Match: R7QIW7_CHOCR (Adrenodoxin, putative (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIW7_CHOCR)

HSP 1 Score: 109 bits (272), Expect = 2.220e-29
Identity = 51/66 (77.27%), Postives = 59/66 (89.39%), Query Frame = 0 
Query:    1 LDRPSFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLHGMRVTLPPATRNMAVDGFVPQPH 66
            L++ +FD LD+PCDDENDMLDLAF LSE+SRLGCQV ++  L G+RVTLPPATRNMAVDGFVPQPH
Sbjct:   59 LEQSAFDALDDPCDDENDMLDLAFGLSEVSRLGCQVNVTTDLDGIRVTLPPATRNMAVDGFVPQPH 124
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BLAST of Gvermi5830.t1 vs. uniprot
Match: A0A7S1XC96_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XC96_9RHOD)

HSP 1 Score: 102 bits (255), Expect = 2.620e-26
Identity = 51/66 (77.27%), Postives = 55/66 (83.33%), Query Frame = 0 
Query:    1 LDRPSFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLHGMRVTLPPATRNMAVDGFVPQPH 66
            LD  S+ KL EP DDENDMLDLAF LSE SRLGCQVK+SK L GM V LPPATRNMAVDG+VP+PH
Sbjct:  100 LDEISYGKLSEPTDDENDMLDLAFGLSETSRLGCQVKVSKDLAGMTVRLPPATRNMAVDGYVPKPH 165
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BLAST of Gvermi5830.t1 vs. uniprot
Match: A0A4P9ZNM6_9FUNG (Uncharacterized protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZNM6_9FUNG)

HSP 1 Score: 91.3 bits (225), Expect = 6.310e-23
Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 0 
Query:    1 LDRPSFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLHGMRVTLPPATRNMAVDGFVPQPH 66
            +D   +DKL+EP D+ENDMLDLAF L+E SRLGCQV ++K L G+ V +P ATRNMAVDGF P+PH
Sbjct:    1 MDPEDYDKLEEPSDEENDMLDLAFGLTETSRLGCQVVMTKDLDGLVVRMPSATRNMAVDGFKPKPH 66
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BLAST of Gvermi5830.t1 vs. uniprot
Match: A0A7S3BCS5_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BCS5_9VIRI)

HSP 1 Score: 92.4 bits (228), Expect = 3.570e-22
Identity = 46/66 (69.70%), Postives = 52/66 (78.79%), Query Frame = 0 
Query:    1 LDRPSFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLHGMRVTLPPATRNMAVDGFVPQPH 66
            L+   FDKLDEP DDENDMLDLAFAL+E SRLGCQV  +K+L GM VT+P ATRN  VDG+VP  H
Sbjct:  105 LEESVFDKLDEPSDDENDMLDLAFALTETSRLGCQVICTKELDGMVVTVPSATRNFGVDGYVPPKH 170
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BLAST of Gvermi5830.t1 vs. uniprot
Match: C1EI82_MICCC (2Fe-2S ferredoxin-type domain-containing protein n=3 Tax=Micromonas TaxID=38832 RepID=C1EI82_MICCC)

HSP 1 Score: 89.7 bits (221), Expect = 5.650e-22
Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 0 
Query:    2 DRPSFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLHGMRVTLPPATRNMAVDGFVPQPH 66
            D+  +D L EP DDENDMLDLAF L+E SRLGCQV  +K+L GM ++LP ATRN AVDGFVP+PH
Sbjct:   31 DQAVYDALPEPDDDENDMLDLAFGLTETSRLGCQVIAAKELDGMTLSLPKATRNFAVDGFVPKPH 95
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BLAST of Gvermi5830.t1 vs. uniprot
Match: A0A0L0SP51_ALLM3 (2Fe-2S ferredoxin-type domain-containing protein n=3 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SP51_ALLM3)

HSP 1 Score: 91.3 bits (225), Expect = 7.330e-22
Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = 0 
Query:    1 LDRPSFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLHGMRVTLPPATRNMAVDGFVPQPH 66
            +D   +DK+ EP D+ENDMLDLAF L++ SRLGCQV + K+L G++VT+P ATRNMAVDGF P+PH
Sbjct:   92 VDPAFYDKIPEPTDEENDMLDLAFGLTDTSRLGCQVAMCKELDGIKVTIPSATRNMAVDGFKPKPH 157
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BLAST of Gvermi5830.t1 vs. uniprot
Match: D8QPI9_SELML (2Fe-2S ferredoxin-type domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QPI9_SELML)

HSP 1 Score: 89.0 bits (219), Expect = 1.200e-21
Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 0 
Query:    1 LDRPSFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLHGMRVTLPPATRNMAVDGFVPQPH 66
            +D   + KL EP D+ENDMLDLAF L+E SRLGCQ+    +L GMR+ LPPATRN AVDG VP+PH
Sbjct:   32 MDEELYQKLPEPSDEENDMLDLAFGLTETSRLGCQIIAKPELDGMRLALPPATRNFAVDGHVPKPH 97
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BLAST of Gvermi5830.t1 vs. uniprot
Match: E1ZQH4_CHLVA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZQH4_CHLVA)

HSP 1 Score: 89.0 bits (219), Expect = 1.270e-21
Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = 0 
Query:    2 DRPSFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLHGMRVTLPPATRNMAVDGFVPQPH 66
            D+  +DKL EP DDENDMLDLAF L++ SRLGCQ+  SK+L G+ V +P ATRNMAVDGF P+PH
Sbjct:   35 DQEYYDKLPEPDDDENDMLDLAFGLTDTSRLGCQILASKELDGLVVRIPSATRNMAVDGFRPKPH 99
[Close]
BLAST of Gvermi5830.t1 vs. uniprot
Match: A0A835N4U4_9ROSI (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Salix dunnii TaxID=1413687 RepID=A0A835N4U4_9ROSI)

HSP 1 Score: 88.2 bits (217), Expect = 1.700e-21
Identity = 41/65 (63.08%), Postives = 52/65 (80.00%), Query Frame = 0 
Query:    2 DRPSFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLHGMRVTLPPATRNMAVDGFVPQPH 66
            D   ++KL++P D+ENDMLDLAF L+E SRLGCQV    +L+GMR+ LP ATRN AVDG+VP+PH
Sbjct:   20 DMEYYNKLEDPTDEENDMLDLAFGLTETSRLGCQVIAKPELNGMRIALPAATRNFAVDGYVPKPH 84
[Close]
BLAST of Gvermi5830.t1 vs. uniprot
Match: K8F611_9CHLO (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F611_9CHLO)

HSP 1 Score: 91.7 bits (226), Expect = 1.760e-21
Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = 0 
Query:    2 DRPSFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLHGMRVTLPPATRNMAVDGFVPQPH 66
            D+  FDKL E CDDENDMLDLAF L+E SRLGCQ+   +++ G+RV +P ATRN AVDGFVP+PH
Sbjct:  145 DQNVFDKLPEACDDENDMLDLAFGLTETSRLGCQIIAKEEIDGIRVKIPAATRNFAVDGFVPKPH 209
The following BLAST results are available for this feature:
BLAST of Gvermi5830.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QIW7_CHOCR2.220e-2977.27Adrenodoxin, putative (Fragment) n=1 Tax=Chondrus ... [more]
A0A7S1XC96_9RHOD2.620e-2677.27Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A4P9ZNM6_9FUNG6.310e-2365.15Uncharacterized protein n=1 Tax=Dimargaris cristal... [more]
A0A7S3BCS5_9VIRI3.570e-2269.70Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
C1EI82_MICCC5.650e-2267.692Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A0L0SP51_ALLM37.330e-2263.642Fe-2S ferredoxin-type domain-containing protein n... [more]
D8QPI9_SELML1.200e-2163.642Fe-2S ferredoxin-type domain-containing protein n... [more]
E1ZQH4_CHLVA1.270e-2166.152Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A835N4U4_9ROSI1.700e-2163.082Fe-2S ferredoxin-type domain-containing protein n... [more]
K8F611_9CHLO1.760e-2166.152Fe-2S ferredoxin-type domain-containing protein n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001055AdrenodoxinPRINTSPR00355ADRENODOXINcoord: 7..21
score: 53.03
coord: 30..38
score: 68.69
IPR001055AdrenodoxinPANTHERPTHR23426FERREDOXIN/ADRENODOXINcoord: 3..66
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 1..61
e-value: 4.7E-18
score: 66.8
NoneNo IPR availablePANTHERPTHR23426:SF54ADRENODOXIN-LIKE PROTEIN 1, MITOCHONDRIAL-RELATEDcoord: 3..66
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 5..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:267502..267793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5830.t1Gvermi5830.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 267502..267793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5830.t1 ID=Gvermi5830.t1|Name=Gvermi5830.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=67bp
LDRPSFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLHGMRVTLP
PATRNMAVDGFVPQPH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001055Adrenodoxin
IPR012675Beta-grasp_dom_sf
IPR0360102Fe-2S_ferredoxin-like_sf