Gvermi6108.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6108.t1
Unique NameGvermi6108.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length402
Homology
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BLAST of Gvermi6108.t1 vs. uniprot
Match: R7QJR8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJR8_CHOCR)

HSP 1 Score: 202 bits (515), Expect = 3.240e-55
Identity = 141/410 (34.39%), Postives = 210/410 (51.22%), Query Frame = 0 
Query:    3 CMRRWVDARLRSGASVSDLCLLAESEWNAVIRLVRSAQTVIDELQQCVS-QNGVNALNALHMNGNDRQRCSSTASIHRSLANRGVAVKSHVGILTAVENTVDGCCQLREQVIERGLVFLHAEVLLHCFSSVMEALIVDKRPSCSRLDTPLRSVCERGLQHAPLAPNGKAEKGDTAAPSESEDEVLHREQVRHWEHKANAETSAIFKASTLRIS---HSTADTSSAKYEYDEFGDRIVATLDGLSEGDLESEMAPSSSLLFESNSAGKREWEQGTRHVHRLGAYEE-------EQVLTERDRRVLTCGHEFGLQLKEKEVCMRQNLNGEEERFILKDADGAVAIGIETAGRVWGTGDRDVAIGAKLFLDAAASVAADTMGWPVAETNFSVAEGLSKSADQCRSLLYASRML 401
            C+ R  D +    A    + LL ESEWNAV+RLV +A+ VI EL+ C + +           + +  Q   S   +  +L + G +      ++ AV     GC  LRE+V+ERG+  LH EV+L CF   M+ L ++K+            V + GL  + +  N                     + + H      ++ + IFK S  ++S    S+ DTS A  EYDEFGDRI    + +++ D+E    PS+++ FE+      EW+   R        ++        Q LT+ DRR++  G  FG +L+ K+  ++ NL+  E RFI  +ADG VA GI  AG + G GDRDVA GA+LFLDAAA+  A   GWPV E+++SVAEG S S  +CR+LLYA+ ++
Sbjct:  318 CLSRMYD-KSNHLAREKPVRLLDESEWNAVVRLVVNAKVVIAELENCTNTEEEWKPTGVTSHSSSFSQESVSILKLRAALCDHGASASHQRAVIEAVGRMRSGCRILREEVVERGIAVLHTEVVLRCFWEAMQTLTINKK------------VKKTGLSRSAIPAN---------------------DAIPHVNGTGISKVAPIFKTSNFQLSDAERSSEDTSVAMCEYDEFGDRIAN--ENVTDVDIEDYSFPSTAV-FEAT-----EWKAPPRDSSIRSTTDDVMLSAAQTQALTDTDRRIVARGRAFGEELRSKDEVIKCNLSVRERRFIFCEADGGVAAGIRVAGELAGKGDRDVASGARLFLDAAATTGAVAFGWPVVESDYSVAEGASASGSECRTLLYAAGLM 685
The following BLAST results are available for this feature:
BLAST of Gvermi6108.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QJR8_CHOCR3.240e-5534.39Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:2466114..2467319 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6108.t1Gvermi6108.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 2466114..2467319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6108.t1 ID=Gvermi6108.t1|Name=Gvermi6108.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=402bp
MQCMRRWVDARLRSGASVSDLCLLAESEWNAVIRLVRSAQTVIDELQQCV
SQNGVNALNALHMNGNDRQRCSSTASIHRSLANRGVAVKSHVGILTAVEN
TVDGCCQLREQVIERGLVFLHAEVLLHCFSSVMEALIVDKRPSCSRLDTP
LRSVCERGLQHAPLAPNGKAEKGDTAAPSESEDEVLHREQVRHWEHKANA
ETSAIFKASTLRISHSTADTSSAKYEYDEFGDRIVATLDGLSEGDLESEM
APSSSLLFESNSAGKREWEQGTRHVHRLGAYEEEQVLTERDRRVLTCGHE
FGLQLKEKEVCMRQNLNGEEERFILKDADGAVAIGIETAGRVWGTGDRDV
AIGAKLFLDAAASVAADTMGWPVAETNFSVAEGLSKSADQCRSLLYASRM
L*
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