Gvermi5862.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5862.t1
Unique NameGvermi5862.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length94
Homology
BLAST of Gvermi5862.t1 vs. uniprot
Match: A0A2V3IUH0_9FLOR (Mitochondrial import inner membrane translocase subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUH0_9FLOR)

HSP 1 Score: 127 bits (319), Expect = 1.210e-36
Identity = 64/71 (90.14%), Postives = 68/71 (95.77%), Query Frame = 0
Query:    1 MAAEPSQDEVFSRVRRQLQEQQMEDLVRTMADKCFEKCVKKPGKSLSTSEQQCIAKSMDRYMDVMAVVFNT 71
            MA+EPSQDEVF RVRRQLQEQQME+LVR M DKCFEKCVKKPGKSLSTSEQQCIAKSMDRYM+VMA+VFNT
Sbjct:    1 MASEPSQDEVFLRVRRQLQEQQMEELVRAMTDKCFEKCVKKPGKSLSTSEQQCIAKSMDRYMEVMALVFNT 71          
BLAST of Gvermi5862.t1 vs. uniprot
Match: UPI00143D3481 (mitochondrial import inner membrane translocase subunit Tim13-B isoform X1 n=2 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143D3481)

HSP 1 Score: 70.9 bits (172), Expect = 3.980e-14
Identity = 30/65 (46.15%), Postives = 48/65 (73.85%), Query Frame = 0
Query:    8 DEVFSRVRRQLQEQQMEDLVRTMADKCFEKCVKKPGKSLSTSEQQCIAKSMDRYMDVMAVVFNTH 72
            D V  +V++++    +++L+  MA+KCF KC+ KPG SL +SEQ+C+A  MDRYMD +++V NT+
Sbjct:   15 DAVMEKVKQEIAVANVQELLSKMANKCFRKCISKPGTSLESSEQKCVAMCMDRYMDTLSIVANTY 79          
BLAST of Gvermi5862.t1 vs. uniprot
Match: M2WUU7_GALSU (Mitochondrial import inner membrane translocase subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WUU7_GALSU)

HSP 1 Score: 69.3 bits (168), Expect = 1.730e-13
Identity = 31/64 (48.44%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    8 DEVFSRVRRQLQEQQMEDLVRTMADKCFEKCVKKPGKSLSTSEQQCIAKSMDRYMDVMAVVFNT 71
            ++V  RVR ++  Q  ++LV+ +++KCF KC+ KPG SL++SEQ C+AK MDRY+D M +V  T
Sbjct:   20 NQVEERVRNEMLRQVFQELVQNISEKCFLKCITKPGSSLTSSEQTCLAKCMDRYLDAMGIVSKT 83          
BLAST of Gvermi5862.t1 vs. uniprot
Match: A0A1Q3EU78_CULTA (Mitochondrial import inner membrane translocase subunit n=1 Tax=Culex tarsalis TaxID=7177 RepID=A0A1Q3EU78_CULTA)

HSP 1 Score: 68.6 bits (166), Expect = 3.150e-13
Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 0
Query:    8 DEVFSRVRRQLQEQQMEDLVRTMADKCFEKCVKKPGKSLSTSEQQCIAKSMDRYMDVMAVVFNTHPLLVTKPVQK 82
            DE+ S+V++Q+     ++L+  M +KCF+KC+ KPG  L +SEQ+CIA  MDRYMD   +V  T+ L + K   K
Sbjct:   14 DELMSQVKQQIALANAQELLTKMTEKCFKKCISKPGTELDSSEQKCIAMCMDRYMDSWNLVSRTYTLRIQKEQYK 88          
BLAST of Gvermi5862.t1 vs. uniprot
Match: A0A6P5AZV9_BRABE (Mitochondrial import inner membrane translocase subunit n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5AZV9_BRABE)

HSP 1 Score: 68.6 bits (166), Expect = 3.310e-13
Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 0
Query:    6 SQDEVFSRVRRQLQEQQMEDLVRTMADKCFEKCVKKPGKSLSTSEQQCIAKSMDRYMDVMAVVFNTH 72
            ++DE+  +V+ Q+     ++L++ M+DKCF+KCV KPG SL  SEQ+CIA  MDRYMD   +V  T+
Sbjct:   14 NRDELMDQVKSQIAIANAQELLQKMSDKCFKKCVTKPGTSLDNSEQKCIAMCMDRYMDAWNIVSRTY 80          
BLAST of Gvermi5862.t1 vs. uniprot
Match: A0A1W4WUH6_AGRPL (Mitochondrial import inner membrane translocase subunit n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4WUH6_AGRPL)

HSP 1 Score: 68.2 bits (165), Expect = 4.460e-13
Identity = 32/71 (45.07%), Postives = 48/71 (67.61%), Query Frame = 0
Query:    8 DEVFSRVRRQLQEQQMEDLVRTMADKCFEKCVKKPGKSLSTSEQQCIAKSMDRYMDVMAVVFNTHPLLVTK 78
            DE+  +V++Q+     ++L+  M +KCF+KC+ KPG SL +SEQ+CIA  MDRYMD   +V  T+ L + K
Sbjct:   14 DELMDQVKQQIAVANAQELLTKMTEKCFKKCIAKPGTSLDSSEQKCIAMCMDRYMDSWNLVSKTYSLRIQK 84          
BLAST of Gvermi5862.t1 vs. uniprot
Match: A0A6P4K1C1_DROBP (Mitochondrial import inner membrane translocase subunit n=1 Tax=Drosophila bipectinata TaxID=42026 RepID=A0A6P4K1C1_DROBP)

HSP 1 Score: 67.0 bits (162), Expect = 1.340e-12
Identity = 31/72 (43.06%), Postives = 50/72 (69.44%), Query Frame = 0
Query:    1 MAAEPSQDEVFSRVRRQLQEQQMEDLVRTMADKCFEKCVKKPGKSLSTSEQQCIAKSMDRYMDVMAVVFNTH 72
            MA    + E+ S+V++Q+     ++++  M +KCF+KCV+KPGKSL  SEQ+CI++ MDR+MD   +V  T+
Sbjct:    1 MAGNMEKGELMSQVKQQIALANAQEMLSKMTEKCFKKCVQKPGKSLDNSEQKCISQCMDRFMDAWNLVSRTY 72          
BLAST of Gvermi5862.t1 vs. uniprot
Match: A0A7R9A3Y6_9CRUS (Mitochondrial import inner membrane translocase subunit n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9A3Y6_9CRUS)

HSP 1 Score: 67.0 bits (162), Expect = 1.800e-12
Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    8 DEVFSRVRRQLQEQQMEDLVRTMADKCFEKCVKKPGKSLSTSEQQCIAKSMDRYMDVMAVVFNTH 72
            DE+  +V++Q+     ++L++ M+DKCF+KC+ KPG SL + EQ+CI+  MDRYMD   VV  T+
Sbjct:   26 DEIMDQVKQQIAIANAQELLQRMSDKCFKKCISKPGTSLDSYEQRCISMCMDRYMDTWNVVSRTY 90          
BLAST of Gvermi5862.t1 vs. uniprot
Match: A0A5N4A3R8_PHOPY (Mitochondrial import inner membrane translocase subunit n=2 Tax=Lampyridae TaxID=7049 RepID=A0A5N4A3R8_PHOPY)

HSP 1 Score: 66.6 bits (161), Expect = 1.840e-12
Identity = 31/71 (43.66%), Postives = 47/71 (66.20%), Query Frame = 0
Query:    8 DEVFSRVRRQLQEQQMEDLVRTMADKCFEKCVKKPGKSLSTSEQQCIAKSMDRYMDVMAVVFNTHPLLVTK 78
            DE+  +V++Q+     ++L+  M +KCF+KC+ KPG SL  SEQ+CIA  MDRYMD   +V  T+ + + K
Sbjct:   14 DELMDQVKQQIAVANAQELLTKMTEKCFKKCISKPGTSLDNSEQKCIAMCMDRYMDSWNLVSRTYGVRIQK 84          
BLAST of Gvermi5862.t1 vs. uniprot
Match: A0A8D8F029_CULPI (Mitochondrial import inner membrane translocase subunit n=2 Tax=Culex pipiens complex TaxID=518105 RepID=A0A8D8F029_CULPI)

HSP 1 Score: 67.8 bits (164), Expect = 1.970e-12
Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 0
Query:    8 DEVFSRVRRQLQEQQMEDLVRTMADKCFEKCVKKPGKSLSTSEQQCIAKSMDRYMDVMAVVFNTHPLLVTKPVQK 82
            DE+ S+V++Q+     ++L+  M +KCF+KC+ KPG  L +SEQ+CIA  MDRYMD   +V  T+ + + K   K
Sbjct:   61 DELMSQVKQQIALANAQELLTKMTEKCFKKCISKPGTELDSSEQKCIAMCMDRYMDSWNLVSRTYTMRIQKEQYK 135          
The following BLAST results are available for this feature:
BLAST of Gvermi5862.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUH0_9FLOR1.210e-3690.14Mitochondrial import inner membrane translocase su... [more]
UPI00143D34813.980e-1446.15mitochondrial import inner membrane translocase su... [more]
M2WUU7_GALSU1.730e-1348.44Mitochondrial import inner membrane translocase su... [more]
A0A1Q3EU78_CULTA3.150e-1344.00Mitochondrial import inner membrane translocase su... [more]
A0A6P5AZV9_BRABE3.310e-1347.76Mitochondrial import inner membrane translocase su... [more]
A0A1W4WUH6_AGRPL4.460e-1345.07Mitochondrial import inner membrane translocase su... [more]
A0A6P4K1C1_DROBP1.340e-1243.06Mitochondrial import inner membrane translocase su... [more]
A0A7R9A3Y6_9CRUS1.800e-1246.15Mitochondrial import inner membrane translocase su... [more]
A0A5N4A3R8_PHOPY1.840e-1243.66Mitochondrial import inner membrane translocase su... [more]
A0A8D8F029_CULPI1.970e-1242.67Mitochondrial import inner membrane translocase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035427Tim10-like domain superfamilyGENE3D1.10.287.810Mitochondrial import inner membrane translocase subunit tim13 like domainscoord: 20..86
e-value: 7.9E-17
score: 62.5
IPR035427Tim10-like domain superfamilySUPERFAMILY144122Tim10-likecoord: 18..71
IPR004217Tim10-likePFAMPF02953zf-Tim10_DDPcoord: 14..70
e-value: 2.2E-18
score: 65.6
NoneNo IPR availablePANTHERPTHR19338:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM13coord: 5..71
IPR039238Mitochondrial import inner membrane translocase subunit Tim8/13PANTHERPTHR19338TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOGcoord: 5..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:425138..425754 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5862.t1Gvermi5862.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 425138..425754 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5862.t1 ID=Gvermi5862.t1|Name=Gvermi5862.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=94bp
MAAEPSQDEVFSRVRRQLQEQQMEDLVRTMADKCFEKCVKKPGKSLSTSE
QQCIAKSMDRYMDVMAVVFNTHPLLVTKPVQKACKQTLKPSES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035427Tim10-like_dom_sf
IPR004217Tim10-like
IPR039238Tim8/13