Gvermi6068.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi6068.t1
Unique Name	Gvermi6068.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	420

Homology

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BLAST of Gvermi6068.t1 vs. uniprot
Match: A0A2V3J3F2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3F2_9FLOR)

HSP 1 Score: 520 bits (1340), Expect = 1.920e-181
Identity = 301/421 (71.50%), Postives = 337/421 (80.05%), Query Frame = 0

Query:    1 MALGGAARPLLVPAADVLAKNMRAYDAHEPLHAGAQESTSSTLF-MNIGAVTESRARARKSSVRFRAAKPDSKPNPVTQFFARLFSAAPKDSSAASPEQQGKSALAATLDKLWPPLEKASAIASRLPDPTVLFLALVLAVLLINRYRPHWFESILVKVAVILSFPPLLAVALLWRKTELFAQLREGRNPLSHPAEHMLDDLGAELKTREDNVKKAQQTLNNNRAKLDALRKELAKDPHAADPTAIIVPSRKAAAMIAAGALGAGYDAEAAHAVEARRREESVKKSREEWRQKAEEVENDPLQTAESVKLLQHHASTAYSKRTREIKTRSASG-RPSERLRALTKVPFGGLPGRHGADESSSPQARMSERTAMSHANSTTSSRRWSLFRRKRRRTNASSPVAGGASMASTPRITAESAADRP 419
            MALG AARPLLVPAADV+AKNM +YD +      A ++ SS  F M+ GAVTES +R+R+ +VRF+AAKPDSKPNP+ Q F RLFS A         +   KSALAA L KLWPPLEKASAIASRLPDPTVLFLA VLAVLL+NRYRP WF+SIL+K+AVILSF PL A+A LW KTELFAQLREG NPLSHPAEHMLDDL AELK RE+NVKKA++ L +NRA+LDALRKELAKDP+A DP AIIVPSRKAAAMIAAGALGAGYDAEAAHAVEARRREESVKKS EEWRQKAEEVE    QT ESV+L+ HHASTAY KRTREIKTRSASG + ++RL+AL K PF GL  R   D+S++   R SE T  S ANST S R+W LFRRKRR TNASS  AG  S+ STPR+T ESAADRP
Sbjct:    1 MALGSAARPLLVPAADVIAKNMSSYDPYSSQSPDADQAASSATFLMSFGAVTESESRSRRHAVRFKAAKPDSKPNPLVQLFHRLFSGASSQXXXXXXDAACKSALAAKLAKLWPPLEKASAIASRLPDPTVLFLAFVLAVLLVNRYRPQWFQSILIKIAVILSFLPLFALAFLWGKTELFAQLREGVNPLSHPAEHMLDDLEAELKAREENVKKAEEKLYHNRAQLDALRKELAKDPNATDPKAIIVPSRKAAAMIAAGALGAGYDAEAAHAVEARRREESVKKSLEEWRQKAEEVEKTASQTEESVQLMVHHASTAYPKRTREIKTRSASGPKSTDRLKALKKSPFSGLANRQNTDDSATHLTRFSEHTNASQANST-SRRKWGLFRRKRRSTNASSAGAGSQSLLSTPRVTTESAADRP 420

The following BLAST results are available for this feature:

BLAST of Gvermi6068.t1 vs. uniprot

BLAST of Gvermi6068.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J3F2_9FLOR	1.920e-181	71.50	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 197..231
None	No IPR available	COILS	Coil	Coil	coord: 278..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 316..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 396..410
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..381
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 174..419
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 129..147
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 153..173
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 148..152
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..128
None	No IPR available	TMHMM	TMhelix		coord: 120..142
None	No IPR available	TMHMM	TMhelix		coord: 154..173

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_1708	contig	ScGOVlb_1708:2011946..2013205 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi6068.t1	Gvermi6068.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_1708 2011946..2013205 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi6068.t1 ID=Gvermi6068.t1|Name=Gvermi6068.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=420bp
MALGGAARPLLVPAADVLAKNMRAYDAHEPLHAGAQESTSSTLFMNIGAV
TESRARARKSSVRFRAAKPDSKPNPVTQFFARLFSAAPKDSSAASPEQQG
KSALAATLDKLWPPLEKASAIASRLPDPTVLFLALVLAVLLINRYRPHWF
ESILVKVAVILSFPPLLAVALLWRKTELFAQLREGRNPLSHPAEHMLDDL
GAELKTREDNVKKAQQTLNNNRAKLDALRKELAKDPHAADPTAIIVPSRK
AAAMIAAGALGAGYDAEAAHAVEARRREESVKKSREEWRQKAEEVENDPL
QTAESVKLLQHHASTAYSKRTREIKTRSASGRPSERLRALTKVPFGGLPG
RHGADESSSPQARMSERTAMSHANSTTSSRRWSLFRRKRRRTNASSPVAG
GASMASTPRITAESAADRP*