Gvermi6197.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6197.t1
Unique NameGvermi6197.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length221
Homology
BLAST of Gvermi6197.t1 vs. uniprot
Match: A0A2V3IVC9_9FLOR (Proteasome subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVC9_9FLOR)

HSP 1 Score: 364 bits (935), Expect = 2.280e-125
Identity = 166/220 (75.45%), Postives = 199/220 (90.45%), Query Frame = 0
Query:    1 MVTGSSVIAIKCADGVAIAADTVASYGSLARFRQVSRLFRATEHCVMGGGGDMSDFDELCETVRKQTTAEFCLDDGHVMGARAVHQMLARVMYNRRNKMDPLWNYVVVGGWQHGQPVLGYVDLVGSHFTSDVIATGYGEYLGLPLLRKAFRADMTVQQGRAVLLDVLKVLFYRDARSIDRVQIACVTEKGAVIEQPVRLHTEWSFKAFVSGARSSDVSTW 220
            +VTGSSVIA++C DGV +A DT+ASYGSLARFRQ+SRL++AT+HCV+GGGGDMSDF ELCETVRK+TT E+C DDGH++ A A+HQMLAR+MYNRRNKMDP WNY++V GWQHG+PVLGYVDLVGSHF S+VIATGYGEYLGLPLLRKA+R D+TV++G+ VL  +L VLFYRDAR+IDR+QIACVTEKG  I +P +L TEWS+KAF+SGAR+SDVSTW
Sbjct:   60 IVTGSSVIAMRCKDGVVMATDTLASYGSLARFRQISRLYKATDHCVIGGGGDMSDFFELCETVRKETTLEYCYDDGHMITASAIHQMLARIMYNRRNKMDPYWNYMLVAGWQHGKPVLGYVDLVGSHFVSEVIATGYGEYLGLPLLRKAYREDITVEEGKKVLQQILTVLFYRDARTIDRIQIACVTEKGVEISEPTKLETEWSYKAFISGARASDVSTW 279          
BLAST of Gvermi6197.t1 vs. uniprot
Match: R7QJL5_CHOCR (Proteasome subunit beta n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJL5_CHOCR)

HSP 1 Score: 305 bits (781), Expect = 1.220e-101
Identity = 144/226 (63.72%), Postives = 184/226 (81.42%), Query Frame = 0
Query:    1 MVTGSSVIAIKCADGVAIAADTVASYGSLARFRQVSRLFRATEHCVMGGGGDMSDFDELCETVRKQTTAEFCLDDGHVMGARAVHQMLARVMYNRRNKMDPLWNYVVVGGWQHG------QPVLGYVDLVGSHFTSDVIATGYGEYLGLPLLRKAFRADMTVQQGRAVLLDVLKVLFYRDARSIDRVQIACVTEKGAVIEQPVRLHTEWSFKAFVSGARSSDVSTW 220
            MVTGSSVIA++C DGV I ADT+ASYGS+ARFR++SRL +AT+ CV+G GGD+SDF +L   V K+T  ++C +DGH +  +A+HQ +ARVMYNRRNKMDPLWNYVV+ G Q+G      +PVLG VDLVG+HF S+VIATG+GEYLGLPLLRKA+R D+TV +G+ V+  ++KVLFYRDAR+IDRVQIA VT+ G  + +P +L TEWS+KAFV GAR+ D+STW
Sbjct:   75 MVTGSSVIAMRCVDGVVIGADTLASYGSMARFRKISRLHKATDMCVVGAGGDLSDFQQLTTMVDKETNRDYCFNDGHGLSPKAIHQYVARVMYNRRNKMDPLWNYVVIAGMQNGDDGEEAKPVLGLVDLVGTHFESEVIATGFGEYLGLPLLRKAYREDITVAEGKKVVEQIMKVLFYRDARTIDRVQIATVTKDGVDMGEPFKLETEWSYKAFVDGARAGDMSTW 300          
BLAST of Gvermi6197.t1 vs. uniprot
Match: A0A5J4YTH8_PORPP (Proteasome subunit beta n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTH8_PORPP)

HSP 1 Score: 259 bits (662), Expect = 2.320e-84
Identity = 120/219 (54.79%), Postives = 165/219 (75.34%), Query Frame = 0
Query:    2 VTGSSVIAIKCADGVAIAADTVASYGSLARFRQVSRLFRATEHCVMGGGGDMSDFDELCETVRKQTTAEFCLDDGHVMGARAVHQMLARVMYNRRNKMDPLWNYVVVGGWQHGQPVLGYVDLVGSHFTSDVIATGYGEYLGLPLLRKAFRADMTVQQGRAVLLDVLKVLFYRDARSIDRVQIACVTEKGAVIEQPVRLHTEWSFKAFVSGARSSDVSTW 220
            V GSSV+ +KC DGV I++DT+ASYGS+A+FR++SR+ + ++ CV+G GG+ SDF E+ +T+      +FC+DDG+V+   A+HQ L RVMY RRNKMDPLWN VV+ G+  G+  LG VD VGS+F S+VIATGYG Y+GLPLLR A+R D+TV + + +L D+++VLFYRDAR+ + +QIA VT+ G  I +   L T+W ++ FV GARS DVSTW
Sbjct:   27 VVGSSVLGVKCIDGVVISSDTLASYGSMAKFRKISRIHKVSDACVIGAGGEFSDFQEIKKTMDGVMIEQFCMDDGYVLTPSAIHQYLVRVMYGRRNKMDPLWNQVVMAGFHDGKATLGMVDQVGSNFESEVIATGYGLYMGLPLLRNAYRPDITVAEAKKLLEDIMRVLFYRDARTSNSIQIAAVTKDGVEISEFYDLETKWDYQRFVDGARSGDVSTW 245          
BLAST of Gvermi6197.t1 vs. uniprot
Match: A0A7S1T8K4_9RHOD (Proteasome subunit beta n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T8K4_9RHOD)

HSP 1 Score: 254 bits (650), Expect = 9.680e-83
Identity = 120/220 (54.55%), Postives = 160/220 (72.73%), Query Frame = 0
Query:    1 MVTGSSVIAIKCADGVAIAADTVASYGSLARFRQVSRLFRATEHCVMGGGGDMSDFDELCETVRKQTTAEFCLDDGHVMGARAVHQMLARVMYNRRNKMDPLWNYVVVGGWQHGQPVLGYVDLVGSHFTSDVIATGYGEYLGLPLLRKAFRADMTVQQGRAVLLDVLKVLFYRDARSIDRVQIACVTEKGAVIEQPVRLHTEWSFKAFVSGARSSDVSTW 220
            MVTGSSVI ++C DGV +AADT+ SYGSLARF+ VSR  + ++  V+G GG+ SDF  L + +  Q T EFC DDG  +G R+++ M A+ M+  R ++DP WNY+V+GG   G+P LG VDL G++F S+VIATG+G Y+GLPLLRKA+R D+TV +   VL DV++VLFYRDARS +R+QI  VT +G  I  P +L T W FK FV G+R++D STW
Sbjct:   12 MVTGSSVIGMRCVDGVVMAADTLLSYGSLARFKDVSRFCKLSKDTVIGVGGEYSDFQSLSQILAAQMTHEFCHDDGSTLGPRSIYHMTAKFMFRHRLEVDPYWNYIVLGGMDQGKPFLGMVDLYGTNFESEVIATGFGIYMGLPLLRKAYREDITVLEATKVLTDVMRVLFYRDARSSERIQITTVTAEGVTISPPTKLDTHWEFKRFVQGSRANDDSTW 231          
BLAST of Gvermi6197.t1 vs. uniprot
Match: M2W1N9_GALSU (Proteasome subunit beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W1N9_GALSU)

HSP 1 Score: 249 bits (636), Expect = 1.430e-80
Identity = 116/220 (52.73%), Postives = 160/220 (72.73%), Query Frame = 0
Query:    1 MVTGSSVIAIKCADGVAIAADTVASYGSLARFRQVSRLFRATEHCVMGGGGDMSDFDELCETVRKQTTAEFCLDDGHVMGARAVHQMLARVMYNRRNKMDPLWNYVVVGGWQHGQPVLGYVDLVGSHFTSDVIATGYGEYLGLPLLRKAFRADMTVQQGRAVLLDVLKVLFYRDARSIDRVQIACVTEKGAVIEQPVRLHTEWSFKAFVSGARSSDVSTW 220
            +VTG SVI IKC+DGV IAADT+ASYGSLARF+  SRL + T+ C++GGGG++SDF E+   +   TT +FC +D H    R++HQ L RV+Y +R++++P WN ++VGG+   Q  LG VDL G+ F S+V+A+G+G  LGLPLLRKA+R D+TVQ+G  ++ +V +VLFYRDARSI+R+Q+A  T  G  I +P  L T+W FK FV+   + D STW
Sbjct:   15 LVTGGSVIGIKCSDGVVIAADTLASYGSLARFQNFSRLLKVTDSCLLGGGGEISDFQEIQRLLENLTTQDFCFNDEHKKSPRSLHQYLGRVLYAQRSRLNPFWNSLIVGGYVQSQSFLGMVDLYGTTFESEVLASGFGVLLGLPLLRKAYRPDLTVQEGIKIVEEVYRVLFYRDARSINRIQVATATVDGVTISEPYSLETKWDFKGFVNPRSTYDESTW 234          
BLAST of Gvermi6197.t1 vs. uniprot
Match: A0A1X6NJT9_PORUM (Proteasome subunit beta n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJT9_PORUM)

HSP 1 Score: 244 bits (623), Expect = 2.260e-78
Identity = 119/219 (54.34%), Postives = 160/219 (73.06%), Query Frame = 0
Query:    2 VTGSSVIAIKCADGVAIAADTVASYGSLARFRQVSRLFRATEHCVMGGGGDMSDFDELCETVRKQTTAEFCLDDGHVMGARAVHQMLARVMYNRRNKMDPLWNYVVVGGWQHGQPVLGYVDLVGSHFTSDVIATGYGEYLGLPLLRKAFRADMTVQQGRAVLLDVLKVLFYRDARSIDRVQIACVTEKGAVIEQPVRLHTEWSFKAFVSGARSSDVSTW 220
            VTGSSV+ +KCADGV IA DT+ASYG+LARF+ +SR+ + + +C++G GGD SDF +L   V  + TA++  +DG  +  +A+H  LAR MY+RR K+DPLWN V+V G+  G+ VL  VDL G+ F+SDV+ATG+G +LGLPLLR A R D+TV + + VL D+LKVLFYRDAR+ D VQ+A VT  G  I +  +L TEW +K+FV GAR  D S+W
Sbjct:   32 VTGSSVLGMKCADGVVIACDTMASYGTLARFKSLSRMHQVSPNCILGVGGDYSDFQQLQTMVDAEMTAQYVANDGLTLSPKAIHSFLARHMYHRRCKVDPLWNTVIVAGFDKGEGVLSLVDLFGTAFSSDVLATGFGLHLGLPLLRNAHRPDITVAEAKGVLEDILKVLFYRDARTNDVVQLASVTAAGVEIGKMTKLKTEWGYKSFVEGARVGDDSSW 250          
BLAST of Gvermi6197.t1 vs. uniprot
Match: A0A165BTV9_9APHY (Proteasome subunit beta n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165BTV9_9APHY)

HSP 1 Score: 213 bits (541), Expect = 9.590e-66
Identity = 106/214 (49.53%), Postives = 146/214 (68.22%), Query Frame = 0
Query:    1 MVTGSSVIAIKCADGVAIAADTVASYGSLARFRQVSRLFRATEHCVMGGGGDMSDFDELCETVRKQTTAEFCLDDGHVMGARAVHQMLARVMYNRRNKMDPLWNYVVVGGWQHGQPVLGYVDLVGSHFTSDVIATGYGEYLGLPLLRKAFRAD---MTVQQGRAVLLDVLKVLFYRDARSIDRVQIACVTEKGAVIEQPVRLHTEWSFKAFVSG 211
            +VTG+SV+AI+  DG+ +AAD +ASYGSLARFR + RL       V+G  GDMSDF  +  T+ +    EF   DGH +G   VH+ L+RVMY RR+KMDPLWN ++VGG Q G+P L +VDL+G+ +++  IATGYG ++ +PLLR +   +   +T  QGR +L D ++VL+YRDARSID+ Q+A VT  G  I +P +L TEWSF   + G
Sbjct:   46 IVTGTSVLAIRYKDGIMMAADNLASYGSLARFRNIQRLHPVGSSTVVGASGDMSDFQYIQHTLDELMVEEFTYGDGHELGPAEVHEYLSRVMYGRRSKMDPLWNALLVGGIQDGKPYLAFVDLLGTTYSAPSIATGYGAHIAIPLLRTSVDPNPDAITEDQGRKILDDCMRVLYYRDARSIDKYQVATVTSAGVSISEPQKLTTEWSFAEQIRG 259          
BLAST of Gvermi6197.t1 vs. uniprot
Match: A0A7S1KSF0_9EUKA (Proteasome subunit beta n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KSF0_9EUKA)

HSP 1 Score: 212 bits (540), Expect = 9.660e-66
Identity = 99/212 (46.70%), Postives = 143/212 (67.45%), Query Frame = 0
Query:    3 TGSSVIAIKCADGVAIAADTVASYGSLARFRQVSRLFRATEHCVMGGGGDMSDFDELCETVRKQTTAEFCLDDGHVMGARAVHQMLARVMYNRRNKMDPLWNYVVVGGWQ--HGQPVLGYVDLVGSHFTSDVIATGYGEYLGLPLLRKAFR----ADMTVQQGRAVLLDVLKVLFYRDARSIDRVQIACVTEKGAVIEQPVRLHTEWSFKAF 208
            TG+SV+AIKC DG+ +A DT+ S+GSLARFR + R+ +     + GG GD +DF ++C+T+ + +  E   DD  +   + +HQ L RVMY RRNK DPLWN ++VGGW+  +  P LGYVDL+G+++ SD IATGYG Y+  P+LRK          TV++ R VL+D ++VL YRDAR+ D++QI+ V   G  IE+P+ + T+W +K F
Sbjct:   37 TGTSVLAIKCIDGIVMATDTLTSWGSLARFRSIQRVTKVNNDTICGGSGDYADFQQICQTLDELSEHEHSRDDDKLRTPKEIHQYLTRVMYERRNKFDPLWNALIVGGWRSKYEAPFLGYVDLIGTNYESDSIATGYGAYIAQPILRKFIDERGGVTYTVKEAREVLIDAMRVLVYRDARTSDKIQISTVDRDGVTIEEPMIIETKWLYKGF 248          
BLAST of Gvermi6197.t1 vs. uniprot
Match: A0A5C3R0J4_9AGAR (Proteasome subunit beta n=1 Tax=Pterula gracilis TaxID=1884261 RepID=A0A5C3R0J4_9AGAR)

HSP 1 Score: 211 bits (536), Expect = 5.470e-65
Identity = 101/214 (47.20%), Postives = 148/214 (69.16%), Query Frame = 0
Query:    1 MVTGSSVIAIKCADGVAIAADTVASYGSLARFRQVSRLFRATEHCVMGGGGDMSDFDELCETVRKQTTAEFCLDDGHVMGARAVHQMLARVMYNRRNKMDPLWNYVVVGGWQHGQPVLGYVDLVGSHFTSDVIATGYGEYLGLPLLRKAFRAD---MTVQQGRAVLLDVLKVLFYRDARSIDRVQIACVTEKGAVIEQPVRLHTEWSFKAFVSG 211
            +VTG+SV+AIK  DG+ +AADT+ASYGSLARF+ + RL    EH V+G  GD+SD+  +   + +    EF   DGH +    +H+ L+RVMY+RR++M+PLWN ++VGG+++G+  L YVDL+G+ +++  +ATGYG Y+  PLLRKA   +   +T +Q R++L   L+VLFYRDARS+++ QIA +  +G  I  PV L TEWSF   + G
Sbjct:   46 IVTGTSVLAIKYKDGIMMAADTLASYGSLARFKSIQRLHSVGEHTVIGASGDLSDYQYIQSLLDEVMIEEFSAADGHSLSPDEIHEFLSRVMYSRRSQMNPLWNSILVGGFKNGKRFLAYVDLLGTTYSASTLATGYGSYIAQPLLRKAVEGNEDTLTEEQARSILTQSLRVLFYRDARSLNKYQIATINAQGTHISDPVTLDTEWSFAEGIRG 259          
BLAST of Gvermi6197.t1 vs. uniprot
Match: A0A0C3L124_9AGAM (Proteasome subunit beta n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3L124_9AGAM)

HSP 1 Score: 210 bits (534), Expect = 1.280e-64
Identity = 103/214 (48.13%), Postives = 144/214 (67.29%), Query Frame = 0
Query:    1 MVTGSSVIAIKCADGVAIAADTVASYGSLARFRQVSRLFRATEHCVMGGGGDMSDFDELCETVRKQTTAEFCLDDGHVMGARAVHQMLARVMYNRRNKMDPLWNYVVVGGWQHGQPVLGYVDLVGSHFTSDVIATGYGEYLGLPLLRKAFRA---DMTVQQGRAVLLDVLKVLFYRDARSIDRVQIACVTEKGAVIEQPVRLHTEWSFKAFVSG 211
            +VTG+SV+AIK  DGV +AAD +ASYGSLARF+ + RL     H V+G GGDMSDF  +   +     +EF   DGH +G   +++ L++VMY RR+KM+PLWN ++VGGW+ G+  LGYVDL+G+ +++  +ATGYG Y+  PLLRKA      ++T ++   ++ + LKVLFYRDARS+++ QIA V EKG  I       TEWSF   + G
Sbjct:   51 IVTGTSVLAIKFKDGVIVAADNLASYGSLARFKDIQRLHAVGTHTVIGAGGDMSDFQHIQHDLDSLIISEFSEGDGHALGPAEIYEYLSQVMYARRSKMNPLWNSILVGGWKDGKSFLGYVDLIGTTYSASTLATGYGAYIAQPLLRKAVEGRENELTEEEAVKIVEESLKVLFYRDARSLNKYQIAIVNEKGVSISDSRIAPTEWSFAEGIRG 264          
The following BLAST results are available for this feature:
BLAST of Gvermi6197.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVC9_9FLOR2.280e-12575.45Proteasome subunit beta n=1 Tax=Gracilariopsis cho... [more]
R7QJL5_CHOCR1.220e-10163.72Proteasome subunit beta n=1 Tax=Chondrus crispus T... [more]
A0A5J4YTH8_PORPP2.320e-8454.79Proteasome subunit beta n=1 Tax=Porphyridium purpu... [more]
A0A7S1T8K4_9RHOD9.680e-8354.55Proteasome subunit beta n=1 Tax=Compsopogon caerul... [more]
M2W1N9_GALSU1.430e-8052.73Proteasome subunit beta n=1 Tax=Galdieria sulphura... [more]
A0A1X6NJT9_PORUM2.260e-7854.34Proteasome subunit beta n=1 Tax=Porphyra umbilical... [more]
A0A165BTV9_9APHY9.590e-6649.53Proteasome subunit beta n=1 Tax=Laetiporus sulphur... [more]
A0A7S1KSF0_9EUKA9.660e-6646.70Proteasome subunit beta n=1 Tax=Percolomonas cosmo... [more]
A0A5C3R0J4_9AGAR5.470e-6547.20Proteasome subunit beta n=1 Tax=Pterula gracilis T... [more]
A0A0C3L124_9AGAM1.280e-6448.13Proteasome subunit beta n=1 Tax=Tulasnella calospo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 1..185
e-value: 5.6E-29
score: 101.0
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1coord: 1..215
e-value: 2.8E-59
score: 202.2
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 2..206
IPR016295Proteasome subunit beta 4PIRSFPIRSF001213MCPcoord: 1..217
e-value: 2.7E-76
score: 253.6
IPR016295Proteasome subunit beta 4PANTHERPTHR11599:SF5PROTEASOME SUBUNIT BETA TYPE-4coord: 2..197
IPR016295Proteasome subunit beta 4CDDcd03760proteasome_beta_type_4coord: 3..196
e-value: 7.1429E-96
score: 275.988
NoneNo IPR availablePIRSRPIRSR600243-1PIRSR600243-1coord: 2..192
e-value: 4.2E-23
score: 79.3
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 2..197
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 8..55
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 4..186
score: 28.202087

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:3247197..3247859 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6197.t1Gvermi6197.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 3247197..3247859 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6197.t1 ID=Gvermi6197.t1|Name=Gvermi6197.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=221bp
MVTGSSVIAIKCADGVAIAADTVASYGSLARFRQVSRLFRATEHCVMGGG
GDMSDFDELCETVRKQTTAEFCLDDGHVMGARAVHQMLARVMYNRRNKMD
PLWNYVVVGGWQHGQPVLGYVDLVGSHFTSDVIATGYGEYLGLPLLRKAF
RADMTVQQGRAVLLDVLKVLFYRDARSIDRVQIACVTEKGAVIEQPVRLH
TEWSFKAFVSGARSSDVSTW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR016295Proteasome_beta4
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type