Gvermi5802.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5802.t1 vs. uniprot
Match: A0A2V3J239_9FLOR (PAB-dependent poly(A)-specific ribonuclease subunit PAN2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J239_9FLOR) HSP 1 Score: 322 bits (825), Expect = 1.140e-96 Identity = 161/282 (57.09%), Postives = 198/282 (70.21%), Query Frame = 0
Query: 98 RGNGYSNWWIDEDGDLHSSNSLSGMPHILDEIADTAMQEVKKIVQSLRIELTDDISVSEITILGSEEETALGYDAASGSFSDTGDIMAEYDLSFVIAQVPPTSQGVEGVSENDGTGSRNVVGHLVAYIHVPRASAIKETEPGKKTEKLKDDGKCTDAEWWCFNDFVIAPCDGFDEVAAFHKFWKTPCIIGYVRRDINERVKMVINDAAVDVREVIGEGNRNAAVGLQPDVEIPGKGTVLALDSEFVMVARDKADIFGDWKWQVVVPVRMALALVSIIRGYGR 379
+ GY WW + G+ + S L++IA+ AMQ KK+V+S+RI+LT+ +SV++++ G+E LGYDA DT D+MAEYDLSFVIAQVP Q + N G ++NV GHLVAYI VPR+ + KT + +DAEWWCFNDFVI+PC+GF+EVAAFH+ WK PC+IGYVRRDIN RV+M N+ DVREVIGE N NAAVGLQPD E+P KGTVLALD EFVMVARD+ADIFGD WQVVVP R ALA VS+IRGYG+
Sbjct: 782 KATGYDEWWFETGGNRNPVQSPRDQTRALEDIANEAMQGEKKLVESMRIDLTNGLSVTKLSDEGTEARADLGYDADGRDAKDTADLMAEYDLSFVIAQVPQAIQEGAEANGNGGMNAKNVEGHLVAYIRVPRSYRERGGSREDKTNSKAVSERNSDAEWWCFNDFVISPCEGFNEVAAFHRMWKRPCVIGYVRRDINSRVEMESNNTLADVREVIGEENCNAAVGLQPDEEVPEKGTVLALDCEFVMVARDEADIFGDGTWQVVVPARKALARVSVIRGYGK 1063
BLAST of Gvermi5802.t1 vs. uniprot
Match: R7QR64_CHOCR (USP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR64_CHOCR) HSP 1 Score: 241 bits (614), Expect = 2.100e-67 Identity = 137/292 (46.92%), Postives = 181/292 (61.99%), Query Frame = 0
Query: 102 YSNWW--IDEDGDLHSSNSLSGMPHI----LDEIADTAMQEVKKIVQSLRIELTDDISVSEIT------ILGSEEETALGYD---AASGSFSDTGDIMAEYDLSFVIAQVPPTSQGVEGVSENDGTGSRNVVGHLVAYIHVPRASAIKETEPGKKTEKLKDDGKCTDAEWWCFNDFVIAPCDGFDEVAAFHKFWKTPCIIGYVRRDINERVKMVINDAAVDVREVIGEGNRNAAVGLQPDVEIPGKGTVLALDSEFVMVARDKADIFGDWKWQVVVPVRMALALVSIIRGYG 378
Y WW D+ D++ + + + L++ + AM+ K++Q++ +++TD +SVSE+ +E E GYD GS + GD AEYDLSFVIA VP G D TG RN+ GHLV+YI VP+ E +K EK + A+WWCFNDFVI+PCDGF EVAAF K WK PC+IG+VRRD+ +RVK + +VREV+G +RNAAVGL+P E+PG+GT+L LD EFV+V RD A+IFGD +VVVP RMALA VS+IRGYG
Sbjct: 787 YERWWDLSDKADDVYIRSRPTASQQLGIEALEKASKAAMERPHKLIQAMLVDVTDGVSVSELEGDDESWRTATEGEPCFGYDKNEVEMGSLNK-GDQSAEYDLSFVIAHVPQLEFEAGGSDRGD-TGRRNIGGHLVSYIRVPQ-----EYRDRQKVEKSQSKDMNLGADWWCFNDFVISPCDGFGEVAAFDKRWKKPCLIGFVRRDVWQRVKACKLEHNANVREVLGTEDRNAAVGLRPGEEVPGRGTLLGLDCEFVIVGRDVAEIFGDGTRKVVVPSRMALARVSVIRGYG 1071
BLAST of Gvermi5802.t1 vs. uniprot
Match: A0A5J4YMM7_PORPP (PAB-dependent poly(A)-specific ribonuclease subunit PAN2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMM7_PORPP) HSP 1 Score: 125 bits (313), Expect = 1.650e-27 Identity = 92/253 (36.36%), Postives = 124/253 (49.01%), Query Frame = 0
Query: 131 DTAMQEVKKIVQSLRI--ELTDDISVSEITILGSEEETALGYDAASGSFSDTGDIMAEYDLSFVIAQVPPTSQGVEGVSENDGTGSRNVVGHLVAYIHVPRASAIKETEPGKKTEKLKDDGKCTDAEWWCFNDFVIAPCDGFDEVAAFHKFWKTPCIIGYVRRDINERVKMVINDAAVD--VREVIGE-GNRNAAVGLQPDVEIPGKGTVLALDSEFVMVARDKADIFGDWKWQVVVPVRMALALVSIIRGYG 378
DTA++ + +LRI E T + V E+T SE A DTG +AEYDL VIA+V ++ V HLVAY+ V + + P WW NDF IA C DEV FH WK PCI+ Y RRD++ R+ + + V+ +RE+ GNR + + E+ GKG ++ALD EFVM+ R++ DI GD VV P RMALA VS++RG G
Sbjct: 854 DTALRGGCALPMNLRIQVEATRGVEVEEMTRESSEIREAA---------EDTGLCVAEYDLCAVIARV------------------QSSVLHLVAYVDVQDSKHTADRSP----------------PWWVLNDFSIARCQSDDEVTRFHVQWKLPCILMYKRRDMHARLAIKRAEHVVEHELRELFTTAGNRAVPLSEREIPEVIGKGLLVALDCEFVMMEREQVDIRGDLSKTVVRPARMALARVSVLRGQG 1063
BLAST of Gvermi5802.t1 vs. uniprot
Match: A0A0L8I679_OCTBM (USP domain-containing protein n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8I679_OCTBM) HSP 1 Score: 87.0 bits (214), Expect = 8.680e-15 Identity = 50/146 (34.25%), Postives = 81/146 (55.48%), Query Frame = 0
Query: 239 GKKTEKLKDDGKCTDAEWWCFNDFVIAPCDGFDEVAAFHKFWKTPCIIGYVRRDINERVKMVI-----NDAAVDVREVIGEG-NRNAAVGLQPDVEIPGKGTVLALDSEFVMVARDKADIFGDWKWQVVVPVRMALALVSIIRGYG 378
GKK + K+ CT +W+ FNDF I P + E F WK PCII + R++IN+ + + +D +D V+ + L PD EIP +G+++ALD+EFV + +++A++ D + P +ALA ++ +RGYG
Sbjct: 928 GKKYHQRKEKVTCT--QWYLFNDFSITPIE-ISEALHFDMDWKIPCIIYFTRKNINQYYDLTVQNPITSDVLLDQSGVVNPKITEKTFIPLTPD-EIPKRGSLVALDAEFVSLDQEQAELKSDGTRSTLKPSHLALARLTCVRGYG 1069
BLAST of Gvermi5802.t1 vs. uniprot
Match: A0A6P7SQV9_OCTVU (PAN2-PAN3 deadenylation complex catalytic subunit PAN2 n=3 Tax=Octopus TaxID=6643 RepID=A0A6P7SQV9_OCTVU) HSP 1 Score: 84.3 bits (207), Expect = 6.760e-14 Identity = 49/146 (33.56%), Postives = 81/146 (55.48%), Query Frame = 0
Query: 239 GKKTEKLKDDGKCTDAEWWCFNDFVIAPCDGFDEVAAFHKFWKTPCIIGYVRRDINERVKMVI-----NDAAVDVREVIGEG-NRNAAVGLQPDVEIPGKGTVLALDSEFVMVARDKADIFGDWKWQVVVPVRMALALVSIIRGYG 378
GKK + K+ CT +W+ FNDF I P + E F WK PCII + R++IN+ + + ++ +D V+ + L PD EIP +G+++ALD+EFV + +++A++ D + P +ALA ++ +RGYG
Sbjct: 911 GKKYHQRKEKVTCT--QWYLFNDFSITPIE-MSEALHFDMDWKIPCIIYFTRKNINQYHDITVQNPITSEVLLDQSGVVNPKITEKTFIPLTPD-EIPKRGSLVALDAEFVSLDQEQAELKSDGTRSTLKPSHLALARLTCVRGYG 1052
BLAST of Gvermi5802.t1 vs. uniprot
Match: A0A812D0M5_SEPPH (PAN2-PAN3 deadenylation complex catalytic subunit PAN2 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812D0M5_SEPPH) HSP 1 Score: 81.3 bits (199), Expect = 6.860e-13 Identity = 62/222 (27.93%), Postives = 104/222 (46.85%), Query Frame = 0
Query: 171 DAASGSFSDTGDIMAEY-----DLSFVIAQVPPTSQGVEGVS-ENDGTGSRNVVGHLVAYIHVPRASA--IKETEPGKKTEKLKDDGKCTDAEWWCFNDFVIAPCDGFDEVAAFHKFWKTPCIIGYVRRDINERVKMVINDAAV-----DVREVIGEGNRNAA-VGLQPDVEIPGKGTVLALDSEFVMVARDKADIFGDWKWQVVVPVRMALALVSIIRGYG 378
DA+S SF + Y LS ++ T E S E D + VA+I + + + + GK + K+ K T ++W+ FNDF I P + E F WK PCII + +++N+ + + + D ++ N V L P+ E P KG+++ALD+EFV + +++A++ D + P +ALA ++ +RGYG
Sbjct: 828 DASSDSFDADDGLRTSYVPVGLRLSLAGDEINVTQLTEESESHEADDLTKEYEIYATVAHIKDAKTAGNLVSSVKVGKTYHQRKE--KVTCSQWYLFNDFAITPIE-LSEALHFDMDWKVPCIIYFAHKNLNDYYDLSVQNPITSKVLFDESGIVNPKRTNQTFVPLSPE-EFPEKGSLVALDAEFVSLDQEQAELKSDGTRSTLKPSHLALARLTCVRGYG 1045
BLAST of Gvermi5802.t1 vs. uniprot
Match: A0A8B7YC60_ACAPL (PAN2-PAN3 deadenylation complex catalytic subunit PAN2 n=2 Tax=Valvatida TaxID=41166 RepID=A0A8B7YC60_ACAPL) HSP 1 Score: 79.3 bits (194), Expect = 2.870e-12 Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = 0
Query: 219 GHLVAYIHVPRASAIKETEPGKKTEKLKDDGKCTDAEWWCFNDFVIAPCDGFDEVAAFHKFWKTPCIIGYVRRDINERVKMVIND----AAVDVREVIGEG--NRNAAVGLQPDVEIPGKGTVLALDSEFVMVARDKADIFGDWKWQVVVPVRMALALVSIIRGYG 378
G+LVA++ V GK K K+ + +W+ FNDF I + EV F+ WK PC++ Y+R DIN + IN + + +G + + L+ D E+P +G ++ +D+EFV + +++A+I D + P +M+ A +S+IRG G
Sbjct: 849 GNLVAHVQV-----------GKTYHKRKEG--VSHMQWYIFNDFSIESIEK-HEVVQFNMEWKVPCVLFYMREDINSHYDITINTPIDHTVLQPEASLSQGVLSHSTFTPLEVD-ELPKEGDIVGIDAEFVSLNQEEAEIRSDGTRSTIKPSQMSAARISVIRGQG 999
BLAST of Gvermi5802.t1 vs. uniprot
Match: UPI0003F0DD5E (PAB-dependent poly(A)-specific ribonuclease subunit 2-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0DD5E) HSP 1 Score: 79.0 bits (193), Expect = 3.780e-12 Identity = 67/261 (25.67%), Postives = 116/261 (44.44%), Query Frame = 0
Query: 128 EIADTAMQEVKK--IVQSLRIELTDDISVSEITILGSEEETALGYDAASGSFSDTGDIMAEYDLSFVIAQVPPTSQGVEGVSENDGTGSRNVVGHLVAYIHVPRASAIKETEPGKKTEKLKDDGKCTDAEWWCFNDFVIAPCDGFDEVAAFHKFWKTPCIIGYVRRDINERVKMVINDAAVDVREVIGEGNRNAAVGLQPDV--------EIPGKGTVLALDSEFVMVARDKADIFGDWKWQVVVPVRMALALVSIIRGYG 378
++AD ++E KK + L+++L+ D ++S I EE G+ YDL + + G G+L A+I V G K K+ T + W+ FNDF IAP D E F+ WK PC++ ++RRD+NE + I + + ++ E + A G++ + E+P G ++ LD+EFV + +++A+I D + P +M+ A ++ +RG G
Sbjct: 720 DLADMGVEETKKSWVPYGLKMKLSSDRTLSVEDIF--EENVGA-----------VGEEYKIYDLHASVVHIQDIKTG----------------GNLAAHILV-----------GPTYHKRKEG--VTHSNWYLFNDFAIAPIDK-HEAVQFNLEWKVPCVLYFLRRDLNEDYECTIT-SPIKASSLLAEPSM-AKAGMKQHIAFTPLQASELPEPGDLVGLDAEFVTLNQEEAEIRSDGTRSTIKPSQMSAARITCVRGQG 935
BLAST of Gvermi5802.t1 vs. uniprot
Match: A0A0H2S3Z6_9AGAM (PAN2-PAN3 deadenylation complex catalytic subunit PAN2 n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2S3Z6_9AGAM) HSP 1 Score: 78.2 bits (191), Expect = 6.680e-12 Identity = 54/172 (31.40%), Postives = 88/172 (51.16%), Query Frame = 0
Query: 214 SRNVVGHLVAYIHVPRASAIKETEPGKKTEKLKDDGKCTDAEWWCFNDFVIAPCDGFDEVAAFHKFWKTPCIIGYVRRDINERVKM--VIN--DAAVDVREVIGEGNR-NAAVG--LQPDVEIPGKGTVLALDSEFVMVARDKADIFGDWKWQVVVPVRMALALVSIIRGYG 378
S+ GHLV+ + VP A ++ + W+ FNDFV+ D + F WK PCI+ Y R D+ ER+ + N D ++ R++ NR N A+ L E+PG GT++++D+EFV + +++ + D +V+ P R +LA VS++RG G
Sbjct: 757 SKEKFGHLVSIVKVPDAEGRSDSS----------------SPWFVFNDFVVTNVPERDAL-GFPGVWKVPCIVYYERVDMLERLNYNELPNKPDMSILYRDISISPNRDNTAIKHELLAQNELPGPGTLVSIDAEFVSMQQEETEYRSDGTKKVIRPARSSLARVSVLRGDG 911
BLAST of Gvermi5802.t1 vs. uniprot
Match: UPI0014556178 (PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014556178) HSP 1 Score: 77.8 bits (190), Expect = 9.040e-12 Identity = 48/168 (28.57%), Postives = 86/168 (51.19%), Query Frame = 0
Query: 219 GHLVAYIHVPRASAIKETEPGKKTEKLKDDGKCTDAEWWCFNDFVIAPCDGFDEVAAFHKFWKTPCIIGYVRRDINER----VKMVINDAAVDVREVIGEG----NRNAAVGLQPDVEIPGKGTVLALDSEFVMVARDKADIFGDWKWQVVVPVRMALALVSIIRGYG 378
G+L+A++ V GK K K+ T +W+ FNDF I + EV F+ WK PC++ Y+R DIN+ +K I+ + + +G + +G++ E+P +G ++ +D+EFV + +++A+I D + P +M+ A +S+ RG G
Sbjct: 849 GNLIAHVQV-----------GKTYHKRKEG--VTHMQWYIFNDFSIESIEK-HEVVQFNMEWKVPCVLYYMREDINDHYEITIKSPIDHTVLQPEASLSQGVLSHSTFTPLGME---ELPKEGDIIGIDAEFVSLNQEEAEIRSDGTRSTIKPSQMSAARISVTRGEG 999 The following BLAST results are available for this feature:
BLAST of Gvermi5802.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5802.t1 ID=Gvermi5802.t1|Name=Gvermi5802.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=380bpback to top |