Gvermi6712.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6712.t1
Unique NameGvermi6712.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length105
Homology
The following BLAST results are available for this feature:
BLAST of Gvermi6712.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029008ER membrane protein complex subunit 6-likePFAMPF07019EMC6coord: 27..101
e-value: 1.3E-9
score: 38.4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 101..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..40
NoneNo IPR availableTMHMMTMhelixcoord: 21..40
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 45..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2072107..2072478 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6712.t1Gvermi6712.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2072107..2072478 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6712.t1 ID=Gvermi6712.t1|Name=Gvermi6712.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=105bp
MQSAKDIRLQSLYTANQQALLFIRIFGYAAGGAAAGMLELQGFEGLLFYI
LVSFTITIALLFKTFFAPGRYLRAPIATIMFFGTFGRNSILTYVLFWTML
FSFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029008EMC6-like