Gvermi6633.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6633.t1
Unique NameGvermi6633.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length324
Homology
BLAST of Gvermi6633.t1 vs. uniprot
Match: A0A2V3IND3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IND3_9FLOR)

HSP 1 Score: 410 bits (1054), Expect = 1.590e-140
Identity = 213/327 (65.14%), Postives = 259/327 (79.20%), Query Frame = 0
Query:    1 MSHDDRFTEFSLQQPS--EDEQPTRTAPARIDWDHWFNSTSVAKIPAIPFPPEQVFMPGEVKQLHLFEARYLALFEAVVLRYDNRCAHVLIDAQRMAMAAIGTVISVSNWKRLNVGVSVHVEAVARGRTLGLISSSPFLRGKFESLHDHSLSEAQLITSRLLEVRFWQAFRDVVSLSIQIGIDPIREKIDTASETVQASN---DAPHVSQFSSNSKRYQDTSADEDMPSTFEGKKKFFENKLKEAASRAVNYSSIDFISDITNDEMLSRRVQGLSFAGWDFFPSGPILRQRALEERNTIARFTTVVQKLEEYSRRLAAQLALQRAFP 322
            MS D+RF EFSLQQPS  ++ QPT  +P+++DW+ W  S S+  IPAIPFPP QVFMPGEVK+LHLFEAR+L LFE VVLRYD RC HVLID++R AMAA G VISV  W+RL+VGVSVH+EAV R +   L SSSPFLRG FES HD  LSE QLI +R LEVRFW+AFRDVVS+S+Q+G  P+R+KIDTAS T+QA+N   + PH + F  N+        DE +  + EGKK+ FE KL+EAASRAVNY  +DF+SDIT+DEML+RRVQGLSFAGWD+FPSGP +RQ+A+E+ +TIARFTTVV+ LEE+SR+LAAQLALQ  FP
Sbjct:   39 MSFDNRFAEFSLQQPSGPDNSQPTHFSPSQMDWEQWLTSASIENIPAIPFPPTQVFMPGEVKRLHLFEARFLELFETVVLRYDKRCTHVLIDSRRRAMAAFGAVISVKEWRRLDVGVSVHIEAVGRMKASRLTSSSPFLRGDFESFHDLPLSEEQLIAARKLEVRFWKAFRDVVSVSLQMGSSPMRQKIDTASSTIQATNVKGEVPHSTDFVLNN--------DEVIRLSSEGKKQLFEAKLQEAASRAVNYLPVDFMSDITDDEMLARRVQGLSFAGWDYFPSGPAMRQKAIEQCDTIARFTTVVENLEEHSRKLAAQLALQSIFP 357          
BLAST of Gvermi6633.t1 vs. uniprot
Match: R7Q3Q9_CHOCR (Lon N-terminal domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3Q9_CHOCR)

HSP 1 Score: 246 bits (627), Expect = 4.610e-76
Identity = 146/330 (44.24%), Postives = 201/330 (60.91%), Query Frame = 0
Query:    1 MSHDDRFTEFSLQQPSEDE-QPTRTAPAR--IDWDHWFNSTSVAKIPAIPFPPEQVFMPGEVKQLHLFEARYLALFEAVVLRYDNRCAHVLIDAQRMAMAAIGTVISVSNWKRLNVGVSVHVEAVARGRTLGLISSSPFLRGKFESLHDHSLSE---AQLITSRLLEVRFWQAFRDVVSLSIQIGIDPIREKIDTASETVQ--ASNDAPHVSQFSSNSKRYQDTSADEDMPSTF-EGKKKFFENKLKEAASRAVNYSSIDFISDITNDEMLSRRVQGLSFAGWDFFPSGPILRQRALEERNTIARFTTVVQKLEEYSRRLAAQLALQRAF 321
            +S  DR+ EFS+  PS+D   PT        +DW  W  S    ++PAIPFPP++VF+PGE K LHLFEARYL+LFE V++  D +CAHVL+   R A+AA GT++ +  W+RL+VGVSV  EAV R R   L ++SPFL+     + DH L E   A+ +T   +E RFW  FR VV L +++G DP+REK+ TA E++   A NDA              DT  + D+ +   E + +++E  L  AA RAVN   + F     + EMLSRR   LSFA W+FF S   +RQ+ALEER+ +AR   VV++LE    +LAA++AL+ AF
Sbjct:   33 VSSCDRWKEFSVGPPSDDAPSPTXXXXXXPSLDWPSWRTSGGSMRVPAIPFPPQEVFLPGESKLLHLFEARYLSLFEHVIVHCDKQCAHVLVAPGRNALAAHGTIVRIREWRRLDVGVSVRFEAVGRLRISKLYNASPFLQADVHVVDDHGLQEGGKAEDVTE--VETRFWTLFRQVVGLCVRLGEDPLREKLSTAEESIAVVAGNDA--------------DTEGETDLVAMSPEARGEYYEEMLLAAARRAVNGEDVRFFIVTNSAEMLSRRAAALSFAAWEFFESTAGMRQKALEERDAVARLHLVVEQLELRKNKLAAKIALENAF 346          
BLAST of Gvermi6633.t1 vs. uniprot
Match: A0A2R6WJ22_MARPO (Lon N-terminal domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WJ22_MARPO)

HSP 1 Score: 81.3 bits (199), Expect = 5.260e-14
Identity = 46/153 (30.07%), Postives = 84/153 (54.90%), Query Frame = 0
Query:   40 VAKIPAIPFPPEQVFMPGEVKQLHLFEARYLALFEAVVLRYDNRCAHVLI----------DAQRMA--MAAIGTVISVSNWKRLNVGVSVHVEAVARGRTLGLISSSPFLRGKFESLHDHSLSEAQLITSRLLEVRFWQAFRDVVSLSIQIGI 180
            + ++P +PF P +VF+P   K LHL+EAR+LAL + V+ +Y+N  AH++I          D +  A  +A  G +  V N +RL++G +V +  + R + + L    PFL+    SL D    + + ++S L +++     ++V  L I++ +
Sbjct:   35 IVELPCLPFSPAEVFVPSSTKILHLYEARFLALLDEVMGKYNNLFAHIIIEPMGPGRDDEDGKGTASFLATYGCLARVENVRRLDIGAAVTIRGIGRIKLVSLTQLEPFLKSTIVSLKDEVPEDEEAVSSALDQLQ--TTLQNVQDLQIKLKV 185          
BLAST of Gvermi6633.t1 vs. uniprot
Match: A0A2R6WIZ9_MARPO (Lon N-terminal domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WIZ9_MARPO)

HSP 1 Score: 81.3 bits (199), Expect = 1.120e-13
Identity = 46/153 (30.07%), Postives = 84/153 (54.90%), Query Frame = 0
Query:   40 VAKIPAIPFPPEQVFMPGEVKQLHLFEARYLALFEAVVLRYDNRCAHVLI----------DAQRMA--MAAIGTVISVSNWKRLNVGVSVHVEAVARGRTLGLISSSPFLRGKFESLHDHSLSEAQLITSRLLEVRFWQAFRDVVSLSIQIGI 180
            + ++P +PF P +VF+P   K LHL+EAR+LAL + V+ +Y+N  AH++I          D +  A  +A  G +  V N +RL++G +V +  + R + + L    PFL+    SL D    + + ++S L +++     ++V  L I++ +
Sbjct:  107 IVELPCLPFSPAEVFVPSSTKILHLYEARFLALLDEVMGKYNNLFAHIIIEPMGPGRDDEDGKGTASFLATYGCLARVENVRRLDIGAAVTIRGIGRIKLVSLTQLEPFLKSTIVSLKDEVPEDEEAVSSALDQLQ--TTLQNVQDLQIKLKV 257          
BLAST of Gvermi6633.t1 vs. uniprot
Match: A0A383W337_TETOB (Lon N-terminal domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W337_TETOB)

HSP 1 Score: 73.2 bits (178), Expect = 5.830e-11
Identity = 50/154 (32.47%), Postives = 78/154 (50.65%), Query Frame = 0
Query:   43 IPAIPFPPEQVFMPGEVKQLHLFEARYLALFEAVVLRYDNR--CAHVLID---------AQRMAMAAIG--------TVISVSNWKRLNVGVSVHVEAVARGRTLGLISSSPFLRGKFESLHDHSLSEAQLITSRLLEVRFWQAFRDVVSLSIQ 177
            +P +PFP E+VF+PG VK LHL+EARYLA+ E V+          HV+++         A     A +G        T+  V   K L VG  V V+A AR     +    PF+RG  E++ D  L + Q +  +L +++     +D+ +LS++
Sbjct:   37 VPLLPFPVEEVFLPGSVKTLHLYEARYLAMLEEVLSNPGRNKFIGHVVVEQLGDPVGSRASAFPHAFVGDNFVMLMGTLCRVLEVKSLQVGALVKVQAEARIAVTRVSQVQPFVRGNVEAVQDGPLQDRQAVQQQLQQLQ--TTMQDLQNLSMK 188          
BLAST of Gvermi6633.t1 vs. uniprot
Match: A0A7S0TK28_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TK28_HEMAN)

HSP 1 Score: 71.6 bits (174), Expect = 1.960e-10
Identity = 41/147 (27.89%), Postives = 72/147 (48.98%), Query Frame = 0
Query:   32 DHWFNSTSVAKIPAIPFPPEQVFMPGEVKQLHLFEARYLALFEAVVLRYDNRCAHVLIDAQRMAMAAIGTVISVSNWKRLNVGVSVHVEAVARGRTLGLISSSPFLRGKFESLHDHSLSEAQLITSRLLEVRFWQAFRDVVSLSIQI 178
            D W +      +  +PFP + + +PGE K LHLFEAR+L LFE    +   R   ++++ Q +    +G  + V +W  L+VGV V V  V R +   ++  +P+     ++  D  L   Q         + ++A  D V++S ++
Sbjct:   79 DEWGSDAEGMTLGCLPFPIQDLLLPGETKSLHLFEARFLKLFEEATGKNKGRLVQLIVNGQDLLN--VGCALEVIDWHPLDVGVKVKVVCVGRVQVTKVVGMAPYPSALVQAYSDTPLDVDQQEEFDQCLAQCFEAHDDCVTISSRL 223          
BLAST of Gvermi6633.t1 vs. uniprot
Match: UPI00098DF278 (uncharacterized protein LOC109830265 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098DF278)

HSP 1 Score: 71.2 bits (173), Expect = 1.970e-10
Identity = 45/168 (26.79%), Postives = 76/168 (45.24%), Query Frame = 0
Query:   22 TRTAPARIDWDHWFNSTSVAKIPAIPFPPEQVFMPGEVKQLHLFEARYLALFEAVVLRYDNRCAHVLID--------AQRMAMAAIGTVISVSNWKRLNVGVSVHVEAVARGRTLGLISSSPFLRGKFESLHDHSLSEAQLITSRLLEVRFWQAFRDVVSLSIQIGID 181
            TR+   R     W  ++S   +P +PF  E+V +P E K LHL+EAR+LAL E ++L       H +++        +     A  G ++ +   +RLN G  V +  V R   + +I   P+LRG      D      + +  +L E+R +      + L ++   D
Sbjct:   38 TRSLSVRSCSSSWRQTSSHLDLPLLPFQSEEVLVPSECKTLHLYEARFLALLEELLLANKKTFVHFVLEPIITGRSSSGASLSARYGCLVLIEKIERLNTGALVSIRGVGRVGIMDIIQMEPYLRGTVIPRQDKVSDLEREMQPKLQELREYLCSLQALQLKLKASKD 205          
BLAST of Gvermi6633.t1 vs. uniprot
Match: A0A5P1FI64_ASPOF (Lon N-terminal domain-containing protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FI64_ASPOF)

HSP 1 Score: 71.2 bits (173), Expect = 3.910e-10
Identity = 45/168 (26.79%), Postives = 76/168 (45.24%), Query Frame = 0
Query:   22 TRTAPARIDWDHWFNSTSVAKIPAIPFPPEQVFMPGEVKQLHLFEARYLALFEAVVLRYDNRCAHVLID--------AQRMAMAAIGTVISVSNWKRLNVGVSVHVEAVARGRTLGLISSSPFLRGKFESLHDHSLSEAQLITSRLLEVRFWQAFRDVVSLSIQIGID 181
            TR+   R     W  ++S   +P +PF  E+V +P E K LHL+EAR+LAL E ++L       H +++        +     A  G ++ +   +RLN G  V +  V R   + +I   P+LRG      D      + +  +L E+R +      + L ++   D
Sbjct:   38 TRSLSVRSCSSSWRQTSSHLDLPLLPFQSEEVLVPSECKTLHLYEARFLALLEELLLANKKTFVHFVLEPIITGRSSSGASLSARYGCLVLIEKIERLNTGALVSIRGVGRVGIMDIIQMEPYLRGTVIPRQDKVSDLEREMQPKLQELREYLCSLQALQLKLKASKD 205          
BLAST of Gvermi6633.t1 vs. uniprot
Match: A0A7J7QEC1_9CHLO (Lon N-terminal domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QEC1_9CHLO)

HSP 1 Score: 68.2 bits (165), Expect = 3.680e-9
Identity = 47/154 (30.52%), Postives = 77/154 (50.00%), Query Frame = 0
Query:   43 IPAIPFPPEQVFMPGEVKQLHLFEARYLALFEAVVLRYDNR--CAHVLID------AQRMA-----------MAAIGTVISVSNWKRLNVGVSVHVEAVARGRTLGLISSSPFLRGKFESLHDHSLSEAQLITSRLLEVRFWQAFRDVVSLSIQ 177
            +P +PF  E+VF+PG VK LHL+EARYLA+ E V+          HV+++        R A           +  +GT+  V   K L VG  V V+A  R     +    PF+ G  E++ D  L + QL+  ++ +++     +D+ +LS++
Sbjct:   83 VPLLPFAVEEVFLPGSVKTLHLYEARYLAMLEEVLSNPGRNKFIGHVVVEQLGDPVGSRAAAFPHAFVGDNFIMLMGTLCRVLEVKSLRVGAFVKVQAECRVAVTRVTKVQPFVLGSVEAVQDVPLQDMQLVQQQVQQLQ--TTMQDLQNLSMK 234          
BLAST of Gvermi6633.t1 vs. uniprot
Match: A0A061S7Q2_9CHLO (Atp-dependent protease la domain-containing protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S7Q2_9CHLO)

HSP 1 Score: 66.2 bits (160), Expect = 1.220e-8
Identity = 43/149 (28.86%), Postives = 70/149 (46.98%), Query Frame = 0
Query:   34 WFNSTSVAKIPAIPFPPEQVFMPGEVKQLHLFEARYLALFEAVVLRYDNRCAHVLIDAQRMAMAAIG-----------------TVISVSNWKRLNVGVSVHVEAVARGRTLGLISSSPFLRGKFESLHD---HSLSEAQLITSRLLEV 162
            W ++    K+  +PFPP++V +PG  K +HL+EARYL+L EA V R DN   H L+   R      G                 T++ + + +R ++G  V +    R     L S+ P++ G  + L D    + SE      +LL++
Sbjct:   69 WLDAADT-KLGLLPFPPDEVLLPGMEKIIHLYEARYLSLLEAAVRRNDNIFLHTLVFPARSPREEFGSPIPGAFVEGDFALAGSTLVQIRDIERQDIGAMVTIRGEGRACLAHLHSAYPYISGSIDPLLDMPPRNHSEVLSSMEKLLDI 216          
The following BLAST results are available for this feature:
BLAST of Gvermi6633.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A2V3IND3_9FLOR1.590e-14065.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q3Q9_CHOCR4.610e-7644.24Lon N-terminal domain-containing protein n=1 Tax=C... [more]
A0A2R6WJ22_MARPO5.260e-1430.07Lon N-terminal domain-containing protein n=2 Tax=M... [more]
A0A2R6WIZ9_MARPO1.120e-1330.07Lon N-terminal domain-containing protein n=3 Tax=M... [more]
A0A383W337_TETOB5.830e-1132.47Lon N-terminal domain-containing protein n=1 Tax=T... [more]
A0A7S0TK28_HEMAN1.960e-1027.89Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
UPI00098DF2781.970e-1026.79uncharacterized protein LOC109830265 n=1 Tax=Aspar... [more]
A0A5P1FI64_ASPOF3.910e-1026.79Lon N-terminal domain-containing protein n=1 Tax=A... [more]
A0A7J7QEC1_9CHLO3.680e-930.52Lon N-terminal domain-containing protein n=1 Tax=S... [more]
A0A061S7Q2_9CHLO1.220e-828.86Atp-dependent protease la domain-containing protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.130.40coord: 28..144
e-value: 1.9E-10
score: 42.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR46732ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEINcoord: 27..314
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 43..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1787598..1788569 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6633.t1Gvermi6633.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1787598..1788569 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6633.t1 ID=Gvermi6633.t1|Name=Gvermi6633.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=324bp
MSHDDRFTEFSLQQPSEDEQPTRTAPARIDWDHWFNSTSVAKIPAIPFPP
EQVFMPGEVKQLHLFEARYLALFEAVVLRYDNRCAHVLIDAQRMAMAAIG
TVISVSNWKRLNVGVSVHVEAVARGRTLGLISSSPFLRGKFESLHDHSLS
EAQLITSRLLEVRFWQAFRDVVSLSIQIGIDPIREKIDTASETVQASNDA
PHVSQFSSNSKRYQDTSADEDMPSTFEGKKKFFENKLKEAASRAVNYSSI
DFISDITNDEMLSRRVQGLSFAGWDFFPSGPILRQRALEERNTIARFTTV
VQKLEEYSRRLAAQLALQRAFPT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015947PUA-like_sf