Gvermi6394.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6394.t1
Unique NameGvermi6394.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length205
Homology
BLAST of Gvermi6394.t1 vs. uniprot
Match: A0A2V3IRX7_9FLOR (40S ribosomal protein S8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX7_9FLOR)

HSP 1 Score: 355 bits (910), Expect = 5.520e-123
Identity = 176/204 (86.27%), Postives = 190/204 (93.14%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYHNYYGIDIGKKKAGENEGETITKKKAEKQSKRAADRLPLDEGVKELFQSGRLLAALSSRPGQCGRADGYILEGKELEFYTRAMQKKKKAGK 204
            MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPA TKLG+KLVRPVRVRGGN+KMR LRLETGNFAWGSEGIAHK+RILNVVYNASNNELVRTNTLVKGC+VQIDATPFR+YYHN+YGID+GKKKAG+NEG+ I           AADRLPLDEGV+ELFQSGRLLA+LSSRPGQCGRADGY+LEGKELEFY++AMQKKKKAGK
Sbjct:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAHTKLGSKLVRPVRVRGGNIKMRALRLETGNFAWGSEGIAHKTRILNVVYNASNNELVRTNTLVKGCVVQIDATPFRQYYHNFYGIDMGKKKAGDNEGDKIXXXXXXXXXXXAADRLPLDEGVRELFQSGRLLASLSSRPGQCGRADGYVLEGKELEFYSKAMQKKKKAGK 204          
BLAST of Gvermi6394.t1 vs. uniprot
Match: R7QGG9_CHOCR (40S ribosomal protein S8 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGG9_CHOCR)

HSP 1 Score: 352 bits (903), Expect = 6.430e-122
Identity = 177/204 (86.76%), Postives = 189/204 (92.65%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYHNYYGIDIGKKKAGENEGETITKKKAEKQSKRAADRLPLDEGVKELFQSGRLLAALSSRPGQCGRADGYILEGKELEFYTRAMQKKKKAGK 204
            MGISRDSRHKRRLTGGKHPYFRKKRK+ELGRQP+ TKLGTKLVRPVRVRGGNLKMR LRLETGNF+WGSEG + KSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFR+YYH +YGIDIGKKKAGE  GE I+ K+AEKQ KRA  RL LD+GV +LFQSGRLLA+LSSRPGQCGRADGY+LEGKELEFYTR MQKKKKAGK
Sbjct:    1 MGISRDSRHKRRLTGGKHPYFRKKRKFELGRQPSMTKLGTKLVRPVRVRGGNLKMRALRLETGNFSWGSEGFSGKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRQYYHRHYGIDIGKKKAGEGAGEVISAKRAEKQKKRAEGRLELDQGVADLFQSGRLLASLSSRPGQCGRADGYLLEGKELEFYTRMMQKKKKAGK 204          
BLAST of Gvermi6394.t1 vs. uniprot
Match: RS8_GRIJA (40S ribosomal protein S8 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=RS8_GRIJA)

HSP 1 Score: 323 bits (827), Expect = 2.440e-110
Identity = 164/204 (80.39%), Postives = 179/204 (87.75%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYHNYYGIDIGKKKAGENEGETITKKKAEKQSKRAADRLPLDEGVKELFQSGRLLAALSSRPGQCGRADGYILEGKELEFYTRAMQKKKKAGK 204
            MGISRDSRHKRRLTGGKHPY  KKRKYELGRQPA TK+G KLVR VRVRGGNLK R LRLE+GNFAWGSE    KSRILNVVYNASNNELVRTNT VKGCI+QIDATPFR+YYHN+YGIDIGKKKAG+ E +  +K+ A KQ KR   RLPLDEG+KELFQSGRL A+++SRPGQ GRADGY+LEGKELEFY +AMQKKKKAGK
Sbjct:    1 MGISRDSRHKRRLTGGKHPYTCKKRKYELGRQPAMTKIGGKLVRTVRVRGGNLKSRALRLESGNFAWGSEAFTSKSRILNVVYNASNNELVRTNTFVKGCIIQIDATPFRQYYHNHYGIDIGKKKAGDEESK-FSKRHAGKQEKRCQTRLPLDEGIKELFQSGRLYASIASRPGQSGRADGYLLEGKELEFYAKAMQKKKKAGK 203          
BLAST of Gvermi6394.t1 vs. uniprot
Match: UPI001E1D5824 (40S ribosomal protein S8-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5824)

HSP 1 Score: 279 bits (713), Expect = 5.960e-93
Identity = 147/201 (73.13%), Postives = 167/201 (83.08%), Query Frame = 0
Query:    3 ISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYHNYYGIDIGKKKAGENEGETITKKKAEKQSKRAA--DRLPLDEGVKELFQSGRLLAALSSRPGQCGRADGYILEGKELEFYTRAMQKKKK 201
            ISRDS HKRRLTGG  P   KKRK+ LGRQPA TKLGTKLVR VRVRGG++K R LRLETG++AWGSE  A K+RILNVVYNASNNELVRTNTLVKG IVQIDATPFR+Y+   YG DIGK+K G+ E E ++ + AEK++KRA   DR+ LD GV ELFQSGRLLA ++SRPGQCGR DGYILEGKELEFY++ MQKKKK
Sbjct:    1 ISRDSLHKRRLTGGTKPKTHKKRKFNLGRQPAMTKLGTKLVREVRVRGGSVKNRALRLETGSYAWGSEAHAAKTRILNVVYNASNNELVRTNTLVKGAIVQIDATPFRQYFLRMYGEDIGKRKTGDAEAEAVSNRVAEKRAKRAEANDRVKLDPGVAELFQSGRLLARIASRPGQCGRCDGYILEGKELEFYSKMMQKKKK 201          
BLAST of Gvermi6394.t1 vs. uniprot
Match: A0A5J4YIL6_PORPP (40S ribosomal protein S8 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YIL6_PORPP)

HSP 1 Score: 268 bits (686), Expect = 7.390e-89
Identity = 141/207 (68.12%), Postives = 166/207 (80.19%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYHNYYGIDIGKKKAGENEGETITKKKAEKQSKRAADRLP---LDEGVKELFQSGRLLAALSSRPGQCGRADGYILEGKELEFYTRAMQKKKKAGK 204
            MGISRDS+HKRRLTGGK  Y+RKKRK+ L RQPA TKLGTKLVRPVRVRGGN+K+RGLRLETGNF+W SE ++HK+R+L VVYNASNNELVRTNTLVKG IVQIDATPF+ +Y N+YG ++GKKK  E  GE   +KK++   K+ A R     +D  + E F SGRL A +SSRPGQ GR DGYILEGKELEFY + + KKKK+GK
Sbjct:    1 MGISRDSKHKRRLTGGKQAYYRKKRKFCLARQPAMTKLGTKLVRPVRVRGGNIKLRGLRLETGNFSWPSEAVSHKTRVLGVVYNASNNELVRTNTLVKGAIVQIDATPFKTWYLNHYGQELGKKKTPEEVGEV--EKKSDAVLKKIAARAEGHVMDRTLAEEFMSGRLYACVSSRPGQSGRCDGYILEGKELEFYKKQLMKKKKSGK 205          
BLAST of Gvermi6394.t1 vs. uniprot
Match: A0A7S1EQ05_9RHOD (40S ribosomal protein S8 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQ05_9RHOD)

HSP 1 Score: 266 bits (679), Expect = 8.880e-88
Identity = 137/206 (66.50%), Postives = 165/206 (80.10%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYHNYYGIDIGKKKA-GENEGETITKKKAE-KQSKRAADRLPLDEGVKELFQSGRLLAALSSRPGQCGRADGYILEGKELEFYTRAMQKKKKAGK 204
            MGISRDS+HKRRLTGGK P FRKKRK+ELGRQ + TKLGTKLVRPVRVRGGN+K+R LRLE GNF+WGSE I  K+RIL VVYNASNNELVRTNTLVKGC+VQIDA PF+ ++  +YG+++GKKK  G +  E + K K+  K+    A+   +D  +++ F SGRL A +SSRPGQ GR DGY+LEGKELEFY R +QKKKK+GK
Sbjct:    1 MGISRDSKHKRRLTGGKQPLFRKKRKFELGRQASMTKLGTKLVRPVRVRGGNVKLRALRLENGNFSWGSEAITRKTRILGVVYNASNNELVRTNTLVKGCVVQIDAAPFKAWHLQHYGVEVGKKKGPGSDATEEVKKSKSVLKKLAARAEGHSVDRALEDEFVSGRLFAVVSSRPGQSGRCDGYVLEGKELEFYKRQLQKKKKSGK 206          
BLAST of Gvermi6394.t1 vs. uniprot
Match: A0A1X6P2M7_PORUM (40S ribosomal protein S8 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2M7_PORUM)

HSP 1 Score: 262 bits (670), Expect = 2.080e-86
Identity = 138/206 (66.99%), Postives = 157/206 (76.21%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYHNYYGIDIGKKKAGENE--GETITKKKAEKQSKRAADRLPLDEGVKELFQSGRLLAALSSRPGQCGRADGYILEGKELEFYTRAMQKKKKAGK 204
            MGISRDS+HKRRLTGGK P++RKKRK+ELGRQPA TKLG ++VRPVRVRGGNLK R LRLE GNFAW SE  A K+R+L VVYNASNNELVRTNTLVKG I+QIDATPFR++Y  +YG++IGKKKA E E                             +LFQSGRLLA +SSRPGQ GR DGY+LEGKELEFY +A+QKKKKAGK
Sbjct:    1 MGISRDSKHKRRLTGGKQPFYRKKRKFELGRQPAMTKLGPQIVRPVRVRGGNLKQRALRLENGNFAWASEATARKTRVLTVVYNASNNELVRTNTLVKGAIIQIDATPFRQWYLQHYGVEIGKKKASEVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLFQSGRLLARISSRPGQSGRCDGYLLEGKELEFYQKALQKKKKAGK 206          
BLAST of Gvermi6394.t1 vs. uniprot
Match: A0A1Y1I5M7_KLENI (40S ribosomal protein S8 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I5M7_KLENI)

HSP 1 Score: 258 bits (658), Expect = 1.810e-84
Identity = 138/211 (65.40%), Postives = 164/211 (77.73%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGT-KLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYHNYYGIDIGKKKAG----ENEGETITKKKA---EKQSKRAADRLPLDEGVKELFQSGRLLAALSSRPGQCGRADGYILEGKELEFYTRAMQKKKKAG 203
            MGISRDS HKRRLTGGK   +RKKRKYELGRQPA TKL + K VRPVRVRGG+LK R LRL+TGNF+WGSE +A K+R+L+VVYNASNNELVRT TLVK  IVQ+DATPFR++Y  +YG +IGKKK      E E E + +KK+   E++  + A+   LD  + E F  GRLLAA+SSRPGQCGR DGYILEG+ELEFY+R +QKKK  G
Sbjct:    1 MGISRDSTHKRRLTGGKKKSWRKKRKYELGRQPAMTKLSSHKTVRPVRVRGGHLKFRALRLDTGNFSWGSEAVARKTRVLDVVYNASNNELVRTQTLVKNAIVQVDATPFRQWYAQHYGAEIGKKKGKTVKKEGEEEEVAEKKSAHVERKLAKRAEGQKLDPNLDEQFAGGRLLAAISSRPGQCGRCDGYILEGRELEFYSRKLQKKKSKG 211          
BLAST of Gvermi6394.t1 vs. uniprot
Match: M2XRH6_GALSU (40S ribosomal protein S8 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRH6_GALSU)

HSP 1 Score: 253 bits (646), Expect = 9.580e-83
Identity = 133/207 (64.25%), Postives = 158/207 (76.33%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYHNYYGIDIGKKKAGENEGETITK---KKAEKQSKRAADRLPLDEGVKELFQSGRLLAALSSRPGQCGRADGYILEGKELEFYTRAMQKKKKAGK 204
            MGI+RD+ HKRRLTGGK   +RKKRKY LGRQPA TKLG K VRPVRVRGGN K R LRL+TGNF+WGSE  + K+RI+ VVYNASNNELVRTNTLVKGCIVQIDATPFR++Y  +YGI+IGKK               K  +KQ   A  R P+++ + + F +G+LLA ++SRPGQCGR DGYILE KELEFY R MQ++KK+GK
Sbjct:    1 MGITRDTLHKRRLTGGKKAVWRKKRKYNLGRQPANTKLGPKAVRPVRVRGGNYKFRALRLDTGNFSWGSESTSRKTRIVAVVYNASNNELVRTNTLVKGCIVQIDATPFRQWYSQHYGIEIGKKXXXXXXXXXXXXXXTKAVDKQKVSAVSR-PVEKALLDQFSTGKLLARVTSRPGQCGRCDGYILEAKELEFYQRQMQRRKKSGK 206          
BLAST of Gvermi6394.t1 vs. uniprot
Match: A0A7S3A8B0_9RHOD (40S ribosomal protein S8 n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8B0_9RHOD)

HSP 1 Score: 252 bits (643), Expect = 2.560e-82
Identity = 130/210 (61.90%), Postives = 162/210 (77.14%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYHNYYGIDIGKKK--AGENEGE----TITKKKAEKQSKRAADRLPLDEGVKELFQSGRLLAALSSRPGQCGRADGYILEGKELEFYTRAMQKKKKAGK 204
            MGISRD  HKRRLTGGK PY+RKKRK+ +GRQP  TKLG+K+VRPVRVRGGN+K R LRLETGNF+WGSE IA K+R++ V YNASNNELVRTNTLVKG IV IDA PF+ +Y+ +YGI++GKKK   GE EG     ++ KK   ++S R+     L+  +++ F +GRLLA ++SRPGQCGR DGYILEG+EL+FY + +  KKK  K
Sbjct:    1 MGISRDKTHKRRLTGGKRPYYRKKRKFCMGRQPTLTKLGSKIVRPVRVRGGNIKQRALRLETGNFSWGSEAIARKTRLIAVTYNASNNELVRTNTLVKGAIVYIDANPFKAWYNQHYGIELGKKKHKEGEEEGTKRSASVLKKIEARESSRS-----LERQIEDQFMTGRLLARIASRPGQCGRCDGYILEGRELDFYVKQLSHKKKKTK 205          
The following BLAST results are available for this feature:
BLAST of Gvermi6394.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRX7_9FLOR5.520e-12386.2740S ribosomal protein S8 n=1 Tax=Gracilariopsis ch... [more]
R7QGG9_CHOCR6.430e-12286.7640S ribosomal protein S8 n=1 Tax=Chondrus crispus ... [more]
RS8_GRIJA2.440e-11080.3940S ribosomal protein S8 n=1 Tax=Griffithsia japon... [more]
UPI001E1D58245.960e-9373.1340S ribosomal protein S8-like n=1 Tax=Mercenaria m... [more]
A0A5J4YIL6_PORPP7.390e-8968.1240S ribosomal protein S8 n=1 Tax=Porphyridium purp... [more]
A0A7S1EQ05_9RHOD8.880e-8866.5040S ribosomal protein S8 n=1 Tax=Timspurckia oligo... [more]
A0A1X6P2M7_PORUM2.080e-8666.9940S ribosomal protein S8 n=1 Tax=Porphyra umbilica... [more]
A0A1Y1I5M7_KLENI1.810e-8465.4040S ribosomal protein S8 n=1 Tax=Klebsormidium nit... [more]
M2XRH6_GALSU9.580e-8364.2540S ribosomal protein S8 n=1 Tax=Galdieria sulphur... [more]
A0A7S3A8B0_9RHOD2.560e-8261.9040S ribosomal protein S8 n=4 Tax=Rhodosorus marinu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042563Ribosomal protein S8e subdomain, eukaryotesGENE3D1.10.168.20Ribosomal protein S8e, subdomaincoord: 108..163
e-value: 9.8E-12
score: 47.3
NoneNo IPR availableGENE3D3.10.290.70coord: 27..201
e-value: 2.4E-51
score: 175.0
NoneNo IPR availablePANTHERPTHR10394:SF340S RIBOSOMAL PROTEIN S8coord: 1..201
NoneNo IPR availableCDDcd11380Ribosomal_S8e_likecoord: 5..184
e-value: 3.66646E-58
score: 177.712
IPR001047Ribosomal protein S8eTIGRFAMTIGR00307TIGR00307coord: 1..186
e-value: 1.4E-48
score: 162.2
IPR001047Ribosomal protein S8ePANTHERPTHR1039440S RIBOSOMAL PROTEIN S8coord: 1..201
IPR022309Ribosomal protein S8e/ribosomal biogenesis NSA2PFAMPF01201Ribosomal_S8ecoord: 5..184
e-value: 4.5E-54
score: 182.2
IPR018283Ribosomal protein S8e, conserved sitePROSITEPS01193RIBOSOMAL_S8Ecoord: 11..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:458469..459210 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6394.t1Gvermi6394.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 458469..459210 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6394.t1 ID=Gvermi6394.t1|Name=Gvermi6394.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=205bp
MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRG
GNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGC
IVQIDATPFRRYYHNYYGIDIGKKKAGENEGETITKKKAEKQSKRAADRL
PLDEGVKELFQSGRLLAALSSRPGQCGRADGYILEGKELEFYTRAMQKKK
KAGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042563Ribosomal_protein_S8e_euk
IPR001047Ribosomal_S8e
IPR022309Ribosomal_S8e/biogenesis_NSA2
IPR018283Ribosomal_S8e_CS