Gvermi6602.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi6602.t1 vs. uniprot
Match: A0A2V3IP61_9FLOR (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP61_9FLOR) HSP 1 Score: 464 bits (1195), Expect = 8.360e-160 Identity = 237/409 (57.95%), Postives = 301/409 (73.59%), Query Frame = 0
Query: 1 MSHAPRRSSRLSIKALSASPDSPKIPIDQSTKK--RAQTCPDDEQNDPSTIEIQSATETPPSSKPKTTGSRDRKRPRKAKKESASTVAQVVISANSSAEKASRAVITEPSNSAPIP----LPIYPPDHASKPYIIPPGILRVVTWNVASFRSILKSGAFQSYLDKENPHILCLQETKLSEGAMGGIPTFKGYDVHWNHSTAKKGYSGVAVFINSNISSLNLVLEKVEQGMGDEIADAEGRVLSLFFNNRLAIINSYVPNSGGKLARLDYRTTGFEPVMRNFLNETAKSWNVLYCGDLNVAHEEIDIHDSKGNKKSAGHTPEERNEFGELLESGAGWIDCWRTLYKEYPGYTYYSRRFGTRLKEAGKGWRLDYHLIDSKSFKLGVLSDCFVRPDIEGSDHYPLIVDYRIS 403
M+ PRRS RLS + S++P++ + D ST K R ++ + T + A + S P + + ++KR R+ K + + + +S + + + E S + + IYP +H SKP+ IP GI+R+VTWNV+SFRS+ KSG FQSYL +ENPHILCLQETK++E AM IP +GY V+W+HS +KGYSGVAVF+N N++SLN+ +E+V +G GD+++D+EGRVLSL+ NN LAIIN+YVPNSGGKLARL YRT FEP MR FLN+TAKSWNV+YCGDLNVAHEEIDIHDSKGN+KSAGHTPEER EFG LLESG GW+DCWR YK YPGYTYYSRRFG RLK +GKGWRLDYH++D +F+ GVLSDCFVRP++EGSDHYPLI+DYRI
Sbjct: 1 MAERPRRSDRLSRRDQSSAPNN--VNQDSSTNKSVRKRSRAKSQVERSPTNGNRDAPKQNTSRSPDPSSTNEKKRLRRTKSSVTQAPSAITSADSSRMDNPGKDINCEEPKSKELESGSHMQIYPEEHDSKPFEIPSGIMRIVTWNVSSFRSVFKSGGFQSYLGRENPHILCLQETKMTEAAMKDIPKIEGYTVYWHHSK-RKGYSGVAVFVNDNVASLNVKVERVNEGFGDDVSDSEGRVLSLYLNNGLAIINAYVPNSGGKLARLGYRTETFEPRMRAFLNDTAKSWNVVYCGDLNVAHEEIDIHDSKGNQKSAGHTPEERKEFGRLLESGKGWVDCWRHSYKLYPGYTYYSRRFGPRLKNSGKGWRLDYHVVDKATFEKGVLSDCFVRPNVEGSDHYPLILDYRID 406
BLAST of Gvermi6602.t1 vs. uniprot
Match: R7QGE2_CHOCR (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGE2_CHOCR) HSP 1 Score: 335 bits (858), Expect = 1.750e-109 Identity = 157/276 (56.88%), Postives = 205/276 (74.28%), Query Frame = 0
Query: 131 PGILRVVTWNVASFRSILKSGAFQSYLDKENPHILCLQETKLSEGAMGGIPTFKGYDVHWNHSTAKKGYSGVAVFINSNISSLNLV-LEKVEQGMGDEIADAEGRVLSLFFNNRLAIINSYVPNSGGKLARLDYRTTGFEPVMRNFLNETAKSWNVLYCGDLNVAHEEIDIHDSKGNKKSAGHTPEERNEFGELLESGAGWIDCWRTLYKEYPGYTYYSRRFGTRLKEAGKGWRLDYHLIDSKSFKLGVLSDCFVRPDIEGSDHYPLIVDYRISEN 405
P L+V+TWNVAS RS++K+G+ Y+ +E P ILCLQETK+++ A+ P YDVHWNHS KKGYSGVA+ + ++ V +++VE G+G AD EGRVL + ++ AI+N+YVPNSG KLARL++RT FE +R FL++ AK V+YCGDLNVAH EIDIH+SK N+K+AGHTPEER EF +LL SG GW+D +R LY PGYTY+SRRFG +LK GKGWRLDYH+ID SFK GV+ D +VR +EGSDHYP++++YR E+
Sbjct: 84 PHKLKVITWNVASCRSMIKNGSLLRYIQQEAPDILCLQETKMTDKAVKEFPEVAAYDVHWNHSE-KKGYSGVAILVRRDLDERKKVRVKRVEAGIGLAEADKEGRVLVCYLSSGAAIVNAYVPNSGQKLARLEFRTKEFEAGLRKFLDDLAKEHRVVYCGDLNVAHNEIDIHNSKANRKNAGHTPEEREEFSKLLSSGEGWVDSFRELYPSVPGYTYFSRRFGAKLKNEGKGWRLDYHVIDKASFKSGVVGDVYVRTQVEGSDHYPVVLEYRFGES 358
BLAST of Gvermi6602.t1 vs. uniprot
Match: A0A7S3A3N2_9RHOD (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3N2_9RHOD) HSP 1 Score: 196 bits (499), Expect = 2.740e-56 Identity = 123/291 (42.27%), Postives = 172/291 (59.11%), Query Frame = 0
Query: 121 DHASKPYIIPPGILRVVTWNVASFRSILKS--GAFQSYLDKENPHILCLQETKLSEGAMGGIPTF----KGYDVHWNHSTAKKGYSGVAVFINSNISSLNLVLEKVEQGMGDEIADAEGRVLSLFFNNRLAIINSYVPNSGGKLARLDYRTTGFEPVMRNFLNETAKSWNVLYCGDLNVAHEEIDIHDSKGNKKSAGHTPEERNEFGELLESGAGWIDCWRTLYKEYPG-YTYYSRRFGTRLKEAGKGWRLDYHLIDSKSFKLGVLSDCFVRPDIEGSDHYPLIVDYRISE 404
+ ASKP R++TWNVAS RS+++ A Q+ +D +CLQETKL E +P F + Y W STA+KGYSG A+F+ ++++ +E V G+GDE ADAEGRV+++ ++ Y PN+G L RLDYRT FE M ++L + A +LYCGDLNVAHE ID+ + +GN +SAG T EER+ F EL++ G +D +R LY E YTY++ R TR +E GWR+DY L+ SK K V DC + GSDH P++++ E
Sbjct: 37 NGASKP-------ARLLTWNVASLRSLIRKQPDALQALVDDFAVDAICLQETKLQESH---VPEFTDILEHYQSFWYCSTARKGYSGTAIFLRNDLN-----VEDVRYGIGDESADAEGRVITIKLPKSY-LVTCYTPNAGTGLKRLDYRTQTFEGKMTDYLRKLASERPLLYCGDLNVAHEPIDLANPEGNSRSAGFTDEERSCFRELIKDGE-LLDTFRMLYPEKRRKYTYWNYR--TRARERNAGWRIDYFLV-SKEVKPAV-GDCVHLDGVLGSDHCPVMLELNDQE 306
BLAST of Gvermi6602.t1 vs. uniprot
Match: A0A1W0A8P7_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8P7_9STRA) HSP 1 Score: 195 bits (496), Expect = 2.850e-55 Identity = 114/264 (43.18%), Postives = 159/264 (60.23%), Query Frame = 0
Query: 135 RVVTWNVASFRSILKS-GAFQSYLDKENPHILCLQETKLSEGAMGGI-PTFKGYDVHWNHSTAKKGYSGVAVFINSNISSLNLVLEKVEQGMGDEIADAEGRVLSLFFNNRLAIINSYVPNSGGKLARLDYRTTGFEPVMRNFLNETAKSWNVLYCGDLNVAHEEIDIHDSKGNKKSAGHTPEERNEFGELLESGAGWIDCWRTLYKEYPGYTYYSRRFGTRLKEAGKGWRLDYHLIDSKSFKLGVLSDCFVRPDIEGSDHYPL 396
R+V WNV R++LK F++Y+ +E+P ILCL ETK+ + ++G + Y + +KGYSG +F S + L+++ E V G D+ EGR ++L F R ++++YVPNSG KL RL+YRT ++ M L E K+ V++CGDLNVAH+EIDIHD K N KSAG T +ER FG LL+ G ++D +R Y E Y+Y+S RFG R K KGWRLDY + S L + D +R I GSDH P+
Sbjct: 100 RIVAWNVNGLRAVLKKDNYFRAYIAREDPDILCLSETKIDQASLGAVRQVLPQYPHQYWRCATQKGYSGTVIF--SKVEPLSVLDEIVLDGKVDD----EGRFIALEFE-RYWVVHTYVPNSGQKLDRLEYRTKKWDVAMFEKLKELEKTKPVIWCGDLNVAHQEIDIHDPKNNHKSAGFTDKERESFGTLLQDG--FVDTFRHKYPEKQEYSYFSYRFGARGKN--KGWRLDYFVTSSSL--LPHIEDSCIRSAITGSDHLPI 350
BLAST of Gvermi6602.t1 vs. uniprot
Match: UPI00082F9E82 (exodeoxyribonuclease III n=1 Tax=Oceanivirga salmonicida TaxID=1769291 RepID=UPI00082F9E82) HSP 1 Score: 189 bits (481), Expect = 2.300e-54 Identity = 113/269 (42.01%), Postives = 166/269 (61.71%), Query Frame = 0
Query: 134 LRVVTWNVASFRSILKSGAFQSYLDKENPHILCLQETKLSEGAMGGIPTFKGYDVHWNHSTAKKGYSGVAVFINSNISSLNLVLEKVEQGMGDEIADAEGRVLSLFFNNRLAIINSYVPNSGGKLARLDYRTTGFEPVMRNFLNETAKSWNVLYCGDLNVAHEEIDIHDSKGNKKSAGHTPEERNEFGELLESGAGWIDCWRTLYKEYPGYTYYSRRFGTRLKEAGKGWRLDYHLIDSKSFKLGVLSDCFVRPDIEGSDHYPLIVDYRI 402
+++++WNV FR++LK G F+ + +KENP I+ LQE KLSEG + P+ GY +WN++ KKGYSG A+F ++N G+G E D EGRV++L + N + Y PNS +L RLDYR +E N+LN + NV+ CGDLNVAH EID+ + K N +SAG T EERN+F LL++G +ID +R LY E Y+++S R R +E GWR+DY +++ + K V +D + ++ GSDH P+++D I
Sbjct: 1 MKLISWNVNGFRAVLKKG-FEDFFEKENPDIIGLQEIKLSEGQVDFNPS--GYYCYWNYAQ-KKGYSGTAIFTKFEPITVNY-------GIGIEEHDNEGRVITLEYEN-FFFVTVYTPNSKSELERLDYRMV-WENEFLNYLNMLKEHKNVIVCGDLNVAHTEIDLKNPKTNTRSAGFTIEERNKFSALLDNG--YIDTYRYLYPEKIEYSWWSYR--GRARERNTGWRIDYFVVN-EDLKDSV-NDAKILTEVLGSDHCPVVLDIEI 250
BLAST of Gvermi6602.t1 vs. uniprot
Match: UPI00189FB968 (exodeoxyribonuclease III n=1 Tax=Alkalibacter mobilis TaxID=2787712 RepID=UPI00189FB968) HSP 1 Score: 188 bits (477), Expect = 8.780e-54 Identity = 115/264 (43.56%), Postives = 160/264 (60.61%), Query Frame = 0
Query: 134 LRVVTWNVASFRSILKSGAFQSYLDKENPHILCLQETKLSEGAMGGIPTFKGYDVHWNHSTAKKGYSGVAVFINSNISSLNLVLEKVEQGMGDEIADAEGRVLSLFFNNRLAIINSYVPNSGGKLARLDYRTTGFEPVMRNFLNETAKSWNVLYCGDLNVAHEEIDIHDSKGNKKSAGHTPEERNEFGELLESGAGWIDCWRTLYKEYPG-YTYYSRRFGTRLKEAGKGWRLDYHLIDSKSFKLGVLSDCFVRPDIEGSDHYPL 396
+++++WNV R+ LK G F+ + E+ I CLQETKLSEG + F GYD +WN++ KKGYSG AVF S VE MG E D EGR++ L F + ++N Y PNS +LARLDYR +E R +L+ +S +V+ CGDLNVAH EID+ + K NKK+AG + +ER +F ELL+ AG++D +R Y + G YT++S F R AG WR+DY L+ S+S K + D + D+ GSDH P+
Sbjct: 1 MKLISWNVNGIRACLKKG-FEDFFINEDADIFCLQETKLSEGQVD--LNFDGYDAYWNYAD-KKGYSGTAVFTKKKPIS-------VEYNMGIEEHDREGRLIKLEFEDYF-LVNVYTPNSQKELARLDYRMK-WEDDFRKYLSTLKESKSVILCGDLNVAHTEIDLKNPKTNKKNAGFSDDEREKFRELLK--AGFVDSFRHFYPDVTGAYTWWSYMFNARKNNAG--WRIDYFLV-SESIKKE-MGDAIIYSDVMGSDHCPI 245
BLAST of Gvermi6602.t1 vs. uniprot
Match: Q23VX1_TETTS (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q23VX1_TETTS) HSP 1 Score: 192 bits (488), Expect = 1.770e-53 Identity = 109/268 (40.67%), Postives = 157/268 (58.58%), Query Frame = 0
Query: 134 LRVVTWNVASFRSILKSGAFQSYLDKENPHILCLQETKLSEGAMGGIPTFK----GYDVHWNHSTAK-KGYSGVAVFINSNISSLNLVLEKVEQGMGDEIADAEGRVLSLFFNNRLAIINSYVPNSGGKLARLDYRTTGFEPVMRNFLNETAKSWNVLYCGDLNVAHEEIDIHDSKGNKKSAGHTPEERNEFGELLESGAGWIDCWRTLYKEYPGYTYYSRRFGTRLKEAGKGWRLDYHLIDSKSFKLGVLSDCFVRPDIEGSDHYPL 396
+++ WNV R++LK Q Y+ +ENP ILCL ETK+ E +K GY +WN KGYSGV++F + S+ ++ E + EGRVL+ F+ + ++ YVPN+G +L RLDYR F+ +N+LN+ NV+ CGDLNVAH+EIDI + K N+ S G T EERN F + LESG WID +R LY E Y+++S R T+ +E+ GWR+DY +++ K FK + D + +I GSDH P+
Sbjct: 134 IKIACWNVNGLRAVLKREDLQKYIKQENPDILCLNETKIDESNFIKEKVYKDIPSGYYQYWNFCIPPIKGYSGVSIFSKEKVISIKKGIDIAEH-------ENEGRVLTAEFD-KFYLVVVYVPNAGSELVRLDYRVNSFDKDFQNYLNQLKLKKNVILCGDLNVAHQEIDIANPKSNRNSPGFTIEERNSFSKFLESG--WIDTFRFLYPETIKYSWWSVR--TKARESNIGWRIDYFVVN-KEFKSSI-KDSMINNNIYGSDHCPV 387
BLAST of Gvermi6602.t1 vs. uniprot
Match: A0A7G9GY82_9FUSO (Exodeoxyribonuclease III n=1 Tax=Fusobacterium sp. NSJ-57 TaxID=2764326 RepID=A0A7G9GY82_9FUSO) HSP 1 Score: 186 bits (471), Expect = 7.260e-53 Identity = 114/270 (42.22%), Postives = 164/270 (60.74%), Query Frame = 0
Query: 134 LRVVTWNVASFRSILKSGAFQSYLDKENPHILCLQETKLSEGAMGGIPTFKGYDVHWNHSTAKKGYSGVAVFINSNISSLNLVLEKVEQGMGDEIADAEGRVLSLFFNNRLAIINSYVPNSGGKLARLDYRTTGFEPVMRNFLNETAKSWNVLYCGDLNVAHEEIDIHDSKGNKKSAGHTPEERNEFGELLESGAGWIDCWRTLYKEYPG-YTYYSRRFGTRLKEAGKGWRLDYHLIDSKSFKLGVLSDCFVRPDIEGSDHYPLIVDYRI 402
+R V+WNV R+ +K G F Y + N I C+QETKL EG + GY+ +WN++ KKGYSGVA+F S ++ +N V G+ E D EGRV++L F+N +IN Y PNS KLARL+YR + +E RN++ E K V+ CGDLNVAH EID+ + K N+++AG + EER + LL SG +ID +R Y + G Y+++S RF R AG WR+DY ++ +K L D + +IEGSDH P+++D ++
Sbjct: 1 MRFVSWNVNGLRACVKKG-FLDYFNSVNADIFCVQETKLQEGQIE--LDLNGYNQYWNYAE-KKGYSGVAIF--SKLTPIN-----VTYGLDIEEHDKEGRVITLEFDN-FYLINVYTPNSQTKLARLEYRMS-WEDDFRNYVVELDKIKPVIVCGDLNVAHNEIDLKNPKSNRQNAGFSDEEREKMTILLNSG--FIDTFRYFYPDTTGVYSWWSYRFNARANNAG--WRIDYFIVSNKL--KDALKDAQIHAEIEGSDHCPVVLDIQL 251
BLAST of Gvermi6602.t1 vs. uniprot
Match: A0A4Z0D927_9FIRM (Exodeoxyribonuclease III n=1 Tax=Soehngenia longivitae TaxID=2562294 RepID=A0A4Z0D927_9FIRM) HSP 1 Score: 186 bits (471), Expect = 7.480e-53 Identity = 114/269 (42.38%), Postives = 168/269 (62.45%), Query Frame = 0
Query: 134 LRVVTWNVASFRSILKSGAFQSYLDKENPHILCLQETKLSEGAMGGIPTFKGYDVHWNHSTAKKGYSGVAVFINSNISSLNLVLEKVEQGMGDEIADAEGRVLSLFFNNRLAIINSYVPNSGGKLARLDYRTTGFEPVMRNFLNETAKSWNVLYCGDLNVAHEEIDIHDSKGNKKSAGHTPEERNEFGELLESGAGWIDCWRTLYKEYPG-YTYYSRRFGTRLKEAGKGWRLDYHLIDSKSFKLGVLSDCFVRPDIEGSDHYPLIVDYR 401
+R+V+WNV R+I+K G +S + K NP +LCLQETK+ EG + + Y+ ++N S KKGYSG A+F S + +N V GM E D EGR++++ +++ ++N Y PNS +L RL+YR +E R +L E K+ V+ CGDLNVAH+EID+ + N+KSAG T EERN+F ELL+ AG+ID +R Y + G YT++S + T+ +E GWR+DY L+ S+S K L D + DI GSDH P+ ++ +
Sbjct: 1 MRLVSWNVNGLRAIMKKGFIES-VKKINPDVLCLQETKMQEGQIDLDVDLEEYEKYFN-SAQKKGYSGTAIF--SKVKPIN-----VTYGMDKEEHDKEGRIITVEYDD-FYLVNVYTPNSKTELERLEYRMI-WEDEFRYYLKELEKTKPVIVCGDLNVAHKEIDLKNPSSNRKSAGFTDEERNKFTELLD--AGFIDTFRYFYPDKEGAYTWWS--YLTKARERNAGWRIDYFLV-SESLK-DRLVDAKIHSDIYGSDHCPVELEIK 252
BLAST of Gvermi6602.t1 vs. uniprot
Match: A0A7X9S616_9CLOT (Exodeoxyribonuclease III n=2 Tax=unclassified Clostridium TaxID=2614128 RepID=A0A7X9S616_9CLOT) HSP 1 Score: 183 bits (465), Expect = 5.810e-52 Identity = 117/269 (43.49%), Postives = 158/269 (58.74%), Query Frame = 0
Query: 135 RVVTWNVASFRSILKSGAFQSYLDKENPHILCLQETKLSEGAMGGIPTFKGYDVHWNHSTAKKGYSGVAVFINSNISSLNLVLEKVEQGMGDEIADAEGRVLSLFFNNRLAIINSYVPNSGGKLARLDYRTTGFEPVMRNFLNETAKSWNVLYCGDLNVAHEEIDIHDSKGNKKSAGHTPEERNEFGELLESGAGWIDCWRTLYKEYPG-YTYYSRRFGTRLKEAGKGWRLDYHLIDSKSFKLGVLSDCFVRPDIEGSDHYPLIVDYRI 402
++++WNV R+ +K G F + + N I C+QETKL EG + GY +WN++ KKGYSG AVF S V++G+G + D EGRVL+L F ++N Y PNS KL RLDYR +E V R++L E KS V+ CGDLNVAH+EID+ + K N+K+AG T EER + ELLE AG+ID +R Y + G Y+++S RF R AG WR+DY L+ S K L D + IEGSDH P+ + I
Sbjct: 3 KLISWNVNGLRACVKKG-FLDFFNDVNADIFCVQETKLQEGQIE--LNLSGYYDYWNYAE-KKGYSGTAVFTKEKPLS-------VKRGIGIKEHDTEGRVLTLEFEE-FYLVNVYTPNSKQKLERLDYRMV-WEDVFRSYLKELEKSKPVILCGDLNVAHKEIDLKNPKNNRKNAGFTDEEREKMTELLE--AGFIDTFRYFYPDTEGVYSWWSYRFNARANNAG--WRIDYFLV-SDGLK-SKLEDAKIYTAIEGSDHCPVELSINI 252 The following BLAST results are available for this feature:
BLAST of Gvermi6602.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi6602.t1 ID=Gvermi6602.t1|Name=Gvermi6602.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=408bpback to top |