Gvermi6664.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6664.t1
Unique NameGvermi6664.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length98
Homology
BLAST of Gvermi6664.t1 vs. uniprot
Match: A0A2V3INA0_9FLOR (Photosystem I subunit O n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INA0_9FLOR)

HSP 1 Score: 167 bits (424), Expect = 1.170e-51
Identity = 78/97 (80.41%), Postives = 88/97 (90.72%), Query Frame = 0
Query:    1 MEFEISEGVEFELNPIVFALAVIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALEDPFWLLFTLWHLGMFATLIFGTIGYNGRKSAS 97
            MEFEISEG++FELNPIV ALA  GWV+PSSIPT+IPLTNGTGL+QAFFAS+QENLA WPKGPA++DPFWLL  LWH+GMFATLIFGTIGYN  K+ S
Sbjct:   49 MEFEISEGMDFELNPIVIALAFFGWVLPSSIPTTIPLTNGTGLSQAFFASMQENLARWPKGPAIDDPFWLLLLLWHVGMFATLIFGTIGYNLSKNRS 145          
BLAST of Gvermi6664.t1 vs. uniprot
Match: A0A1X6NRI2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRI2_PORUM)

HSP 1 Score: 142 bits (357), Expect = 1.740e-41
Identity = 63/95 (66.32%), Postives = 76/95 (80.00%), Query Frame = 0
Query:    1 MEFEISEGVEFELNPIVFALAVIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALEDPFWLLFTLWHLGMFATLIFGTIGYNGRKS 95
            M+FEISE   FE+NP++  LA++GW+VPSS+P  I LT GTGLTQAF AS+  NLA WPKGPA +DPFW L  +WH G+FATLIFGTIG NGRK+
Sbjct:   46 MKFEISENTPFEINPVIIVLAMVGWIVPSSLPAPIALTGGTGLTQAFLASMNANLAAWPKGPAGDDPFWTLMFIWHAGLFATLIFGTIGVNGRKT 140          
BLAST of Gvermi6664.t1 vs. uniprot
Match: R7Q2P0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2P0_CHOCR)

HSP 1 Score: 140 bits (353), Expect = 7.270e-41
Identity = 66/97 (68.04%), Postives = 78/97 (80.41%), Query Frame = 0
Query:    1 MEFEISEGVEFELNPIVFALAVIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALEDPFWLLFTLWHLGMFATLIFGTIGYNGRKSAS 97
            M FEISEGVEF+L+  +  LA++GWVVPSSIP  IPLT G+GLTQAFFAS+  NLA++PKGPA +DPFW L  LWH G+FA +IFGTIGYN RK  S
Sbjct:   50 MGFEISEGVEFKLDLTILILAIVGWVVPSSIPAGIPLTEGSGLTQAFFASMNANLANFPKGPAGDDPFWTLLFLWHTGLFACMIFGTIGYNSRKVQS 146          
BLAST of Gvermi6664.t1 vs. uniprot
Match: A0A7S3A279_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A279_9RHOD)

HSP 1 Score: 139 bits (350), Expect = 1.630e-40
Identity = 63/97 (64.95%), Postives = 79/97 (81.44%), Query Frame = 0
Query:    1 MEFEISEGVEFELNPIVFALAVIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALEDPFWLLFTLWHLGMFATLIFGTIGYNGRKSAS 97
            M+FEIS+G +F+ N IV  L++I WVVPSSIP  IPL NG+GLTQA++ASI +NL+ +PKGPAL+DP+W L  +WH+GMFA LIFGTIGYNG K  S
Sbjct:   41 MKFEISDGEDFDNNGIVIPLSIIAWVVPSSIPAGIPLFNGSGLTQAYWASIMDNLSRYPKGPALDDPYWTLMVMWHIGMFACLIFGTIGYNGSKRKS 137          
BLAST of Gvermi6664.t1 vs. uniprot
Match: A0A7S3A276_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A276_9RHOD)

HSP 1 Score: 137 bits (344), Expect = 4.090e-40
Identity = 62/95 (65.26%), Postives = 77/95 (81.05%), Query Frame = 0
Query:    3 FEISEGVEFELNPIVFALAVIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALEDPFWLLFTLWHLGMFATLIFGTIGYNGRKSAS 97
            FEIS+G +F+ N IV  L++I WVVPSSIP  IPL NG+GLTQA++ASI +NL+ +PKGPAL+DP+W L  +WH+GMFA LIFGTIGYNG K  S
Sbjct:    4 FEISDGEDFDNNGIVIPLSIIAWVVPSSIPAGIPLFNGSGLTQAYWASIMDNLSRYPKGPALDDPYWTLMVMWHIGMFACLIFGTIGYNGSKRKS 98          
BLAST of Gvermi6664.t1 vs. uniprot
Match: M2XWX3_GALSU (Photosystem I subunit O n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XWX3_GALSU)

HSP 1 Score: 134 bits (337), Expect = 2.150e-38
Identity = 58/94 (61.70%), Postives = 74/94 (78.72%), Query Frame = 0
Query:    2 EFEISEGVEFELNPIVFALAVIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALEDPFWLLFTLWHLGMFATLIFGTIGYNGRKS 95
            EF+ISE   F+ NP+V  +A++GW +P+SIP++IP+ +GTGLTQAFF SIQ NLA WPKGPAL+DPFWL   LWH+G+F  L FGTIGY   K+
Sbjct:   54 EFQISEDTPFDANPLVIIVALLGWTLPASIPSNIPILHGTGLTQAFFTSIQSNLAEWPKGPALDDPFWLYMVLWHVGLFIVLFFGTIGYGISKN 147          
BLAST of Gvermi6664.t1 vs. uniprot
Match: A0A7S1HK96_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HK96_HEMAN)

HSP 1 Score: 119 bits (298), Expect = 2.620e-32
Identity = 54/91 (59.34%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    2 EFEISEGVEFELNPIVFALAVIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALEDPFWLLFTLWHLGMFATLIFGTIGYNG 92
            +FEISEG EF+LNPIV  LA++GW VP  +P+ IPL  G GLT A FA I E+L  +P  PA+ DPFW++  +WH G+FAT+IF TIGYNG
Sbjct:   63 KFEISEGQEFDLNPIVLVLAMLGWAVPGLLPSQIPLYGGKGLTTALFAEIGEHLQTFPVPPAMSDPFWVILFIWHSGLFATMIFATIGYNG 153          
BLAST of Gvermi6664.t1 vs. uniprot
Match: A0A7S0MBX0_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MBX0_9CRYP)

HSP 1 Score: 113 bits (283), Expect = 6.110e-30
Identity = 54/99 (54.55%), Postives = 75/99 (75.76%), Query Frame = 0
Query:    2 EFEISEGVEFELNPIVFALAVIGWVVPSS-IPTSIPL--TNGTGLTQAFFASIQENLAHWPKGPALEDPFWLLFTLWHLGMFATLIFGTIGYNGRKSAS 97
            +FEIS+GV++ELNP V A +  GWV+P++ IP++IPL  + G GLTQA +  I E+LA +P  PA+ DPFW++  +WH G+FAT+IFGTIGYNG   A+
Sbjct:   69 DFEISDGVKYELNPFVLAASFYGWVLPTALIPSNIPLYGSKGVGLTQALYNEITEHLATFPTPPAISDPFWVILFIWHSGLFATMIFGTIGYNGYYLAN 167          
BLAST of Gvermi6664.t1 vs. uniprot
Match: A0A7J7IMB0_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMB0_9RHOD)

HSP 1 Score: 112 bits (280), Expect = 1.150e-29
Identity = 50/90 (55.56%), Postives = 67/90 (74.44%), Query Frame = 0
Query:    3 FEISEGVEFELNPIVFALAVIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALEDPFWLLFTLWHLGMFATLIFGTIGYNG 92
            FEIS+G ++ LNP V  +A+IGW   +++P++IP+  GTGLTQAF ASIQ  LA +P GP L+DPFW    ++H+G+FA LIFG IGY G
Sbjct:   56 FEISDGEQYPLNPAVILIAIIGWSAAAAVPSNIPVLGGTGLTQAFLASIQRLLAQYPTGPKLDDPFWFYLVVYHVGLFALLIFGQIGYAG 145          
BLAST of Gvermi6664.t1 vs. uniprot
Match: M1VFJ4_CYAM1 (Uncharacterized protein n=4 Tax=cellular organisms TaxID=131567 RepID=M1VFJ4_CYAM1)

HSP 1 Score: 109 bits (272), Expect = 1.870e-28
Identity = 50/90 (55.56%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    3 FEISEGVEFELNPIVFALAVIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALEDPFWLLFTLWHLGMFATLIFGTIGYNG 92
            FE+S+G  + LNP V  +A+IGW   ++IP++IP+  GTGLTQAF ASIQ  LA +P GP L+DPFW    ++H+G+FA LIFG IGY G
Sbjct:   56 FEVSDGEPYPLNPAVIFIALIGWSAVAAIPSNIPVLGGTGLTQAFLASIQRLLAQYPTGPKLDDPFWFYLIVYHVGLFALLIFGQIGYAG 145          
The following BLAST results are available for this feature:
BLAST of Gvermi6664.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A2V3INA0_9FLOR1.170e-5180.41Photosystem I subunit O n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NRI2_PORUM1.740e-4166.32Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7Q2P0_CHOCR7.270e-4168.04Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3A279_9RHOD1.630e-4064.95Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S3A276_9RHOD4.090e-4065.26Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2XWX3_GALSU2.150e-3861.70Photosystem I subunit O n=1 Tax=Galdieria sulphura... [more]
A0A7S1HK96_HEMAN2.620e-3259.34Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0MBX0_9CRYP6.110e-3054.55Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7J7IMB0_9RHOD1.150e-2955.56Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1VFJ4_CYAM11.870e-2855.56Uncharacterized protein n=4 Tax=cellular organisms... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36311:SF1PHOTOSYSTEM I SUBUNIT Ocoord: 16..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..67
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR017498Photosystem I PsaOPANTHERPTHR36311PHOTOSYSTEM I SUBUNIT Ocoord: 16..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1868023..1868316 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6664.t1Gvermi6664.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1868023..1868316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6664.t1 ID=Gvermi6664.t1|Name=Gvermi6664.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=98bp
MEFEISEGVEFELNPIVFALAVIGWVVPSSIPTSIPLTNGTGLTQAFFAS
IQENLAHWPKGPALEDPFWLLFTLWHLGMFATLIFGTIGYNGRKSAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017498PSI_PsaO