Gvermi6641.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A2V3IDX6_9FLOR (Splicing factor U2AF 65 kDa subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDX6_9FLOR) HSP 1 Score: 498 bits (1282), Expect = 2.420e-172 Identity = 278/439 (63.33%), Postives = 328/439 (74.72%), Query Frame = 0
Query: 1 MHAASPPRASGRSRRSGSPYESERKRARVERLSPDVVPRRRPSDR----DAYESHRSPFSRPSYPPRDNNEVGMLNGSPYGARPVPIMQPPLSNTSKSRRLYIGNVPFHVGLTDTALTQFFSALYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRPEVHNPSGMNLIPDVVNVRAVMELCDKLGGIASAPVQLAAIAASQTS-DEQRTA-PYAQASRN-QTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPE---PVKRSGSSP-------VAPGNEQPE--YKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPRSGIWKRTAFILFKNSSEAKKAVESLKKRVFDKRQIAAIGLPDCRTATEAAARSGTGSSSMRD 420
MHAASPPR+S R+RR SPYES+RKRAR +RLSP+ +PR RPSDR D Y+ HRSP+ + SY R E G+ NGSPY +RP P+M PL NTSKSRRLYIGNVP+ VGLTD A TQFFSALYIA FGPNKPGEPLPV+SFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRPEVHNPSG+NL+P+ VNV AVMELC+KLGGI +AP QLAAIAA Q + RTA P ++A +N T ++ +VA R + P + + ++ R +D+ RP P R S+ V+ ++ + Y VISL+NLVTD+DL G+EEDYEDLVADVQAECENYGSV E+ IP+ G WKRTAFI F SS+AKKAVE+LKKRVFDKR+I A+GL D +TA+EAAAR GTGS M+D
Sbjct: 1 MHAASPPRSSARARRPSSPYESDRKRARTDRLSPEAIPRTRPSDRNWERDPYDPHRSPYGKHSYSHRPKYENGLQNGSPYASRPTPMMHVPLPNTSKSRRLYIGNVPYQVGLTDIAFTQFFSALYIAAFGPNKPGEPLPVLSFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRPEVHNPSGLNLVPESVNVSAVMELCEKLGGIVAAPAQLAAIAACQPARTSSRTASPPSKAEQNLSTNKSEDVAVPRSE-DNFKPATDRNTIDPRARPLREARDMRSEDMTHRPSHKSPTDRGDSNARDRPGGNVSKAKDEADVAYTVISLQNLVTDEDLKGNEEDYEDLVADVQAECENYGSVVEVNIPKRGQWKRTAFIQFSISSDAKKAVEALKKRVFDKRKIVALGLADYQTASEAAARPGTGSGEMQD 438
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A1X6NPD3_PORUM (RRM domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NPD3_PORUM) HSP 1 Score: 124 bits (310), Expect = 5.330e-27 Identity = 70/158 (44.30%), Postives = 92/158 (58.23%), Query Frame = 0
Query: 93 KSRRLYIGNVPFHVGLTDTALTQFFSALYIAGFG----PNK-------PGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRPEVHNPSGMNLIPDVVNVRAVMELCDKLGGIASAPVQLAAIAASQTSDEQRTAPYA 239
K RRLY+GN+P H G+T+ AL + F+ALY+A FG P+ P PV S WLHA+GKF F+E+R EQ+AVN++ +GV LHGRPLR+NRPSDY +P V+ ++ LC +LGGI P Q AA + AP A
Sbjct: 388 KVRRLYVGNLPIHPGVTEQALLELFNALYLAAFGIVNLPSTGVDAVPAPATTPPVSSVWLHAEGKFSFIEMRTEQDAVNLIGLSGVSLHGRPLRINRPSDYHAAATGIVPPQPMP--VDYVSLGRLCSQLGGIVQPPAQQHVAAAQAQLLQPMPAPAA 543
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A1I7YNL7_9BILA (Splicing factor U2AF subunit n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I7YNL7_9BILA) HSP 1 Score: 106 bits (264), Expect = 7.130e-22 Identity = 103/342 (30.12%), Postives = 161/342 (47.08%), Query Frame = 0
Query: 81 VPIMQPPLSNTSKSRRLYIGNVPFHVGLTDTALTQFFSA-LYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP------EVHNPSGMNLIPDVVNVRAVMEL----------CDKLG--GIASAPVQLAAIAASQTSDEQRTAP---YAQASRNQTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEYKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPR-------SGIWKRTAFILFKNSSEAKKAVESLKKRVFDKRQI 393
VP++ P S T +SRRLY+GN+PF G + A+ FF+ +++ G + PV++ ++ D F F+E R E M F+G+ G+ L++ RP DY+P + N N++ D + V L CD+L G+ + A +Q T YA A T G L G G ++ L++Q QRP ++AA V + ++ G QP +V+ L N+VT++DL DEE YED++ D++ EC YG V+ + IPR SG+ K F+ F +S+E +KA +L R F R +
Sbjct: 24 VPVVGP--SVTCQSRRLYVGNIPF--GCNEDAMLDFFNQQMHLCGLAQ---ADGNPVLACQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKIRRPRDYQPMTAAYDQAVNMPVSNIVVDSPHKLFVGGLPSYLTEDQSWCDELPTCGVKELLSSFGQLKAFNLVTDQATGQSKGYAFAEYLDPTLTDQAIAG---LNGMQLGDKKLVVQLSNQGQRPTNSAAFAQV--------QVAGIDLSQGAGQP-TEVLCLMNMVTEEDLQDDEE-YEDILEDIKEECSKYGHVKSLEIPRAVAGTETSGVGK--VFVEFSDSNECQKAQAALTGRKFANRVV 343
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A1I7YMR4_9BILA (Splicing factor U2AF subunit n=2 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I7YMR4_9BILA) HSP 1 Score: 107 bits (267), Expect = 1.240e-21 Identity = 101/332 (30.42%), Postives = 161/332 (48.49%), Query Frame = 0
Query: 81 VPIMQPPLSNTSKSRRLYIGNVPFHVGLTDTALTQFFSA-LYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP------EVHNPSGMNLIPDVVNVRAVMELC-----DKLGGIASAPVQLAAIAASQTSDEQRTAPYAQASRNQTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEYKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPR-------SGIWKRTAFILFKNSSEAKKAVESLKKRVFDKRQI 393
VP++ P S T +SRRLY+GN+PF G + A+ FF+ +++ G + PV++ ++ D F F+E R E M F+G+ G+ L++ RP DY+P + N N++ D + V L D++ + S+ QL A ++ YA A T G L G G ++ L++Q QRP ++AA V + ++ G QP +V+ L N+VT++DL DEE YED++ D++ EC YG V+ + IPR SG+ K F+ F +S+E +KA +L R F R +
Sbjct: 186 VPVVGP--SVTCQSRRLYVGNIPF--GCNEDAMLDFFNQQMHLCGLAQ---ADGNPVLACQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKIRRPRDYQPMTAAYDQAVNMPVSNIVVDSPHKLFVGGLPSYLTEDQVKELLSSFGQLKAFNLVTDQATGQSKGYAFAEYLDPTLTDQAIAG---LNGMQLGDKKLVVQLSNQGQRPTNSAAFAQV--------QVAGIDLSQGAGQP-TEVLCLMNMVTEEDLQDDEE-YEDILEDIKEECSKYGHVKSLEIPRAVAGTETSGVGK--VFVEFSDSNECQKAQAALTGRKFANRVV 495
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A2G8KGU4_STIJA (Splicing factor U2AF subunit (Fragment) n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KGU4_STIJA) HSP 1 Score: 103 bits (258), Expect = 1.300e-20 Identity = 101/336 (30.06%), Postives = 153/336 (45.54%), Query Frame = 0
Query: 91 TSKSRRLYIGNVPFHVGLTDTALTQFFSALYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP--------EVHNPSGMNLI-------------PDVVNVRAVMELCDKLGGIASAPVQLAAIAASQTSDEQRTAPYAQASRNQTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEY-----KVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPRS-------GIWKRTAFILFKNSSEAKKAVESLKKRVFDKRQI 393
T ++RRLY+GN+PF G+++ A+ FF+ PG LPV++ ++ D F F+E R E M F+GV G+ L++ RP DY+P VH P ++ + P+ +N + EL G + + L +A+ S Y + T+ T ++A L G G ++ L Q G+ A+Q S + PG E P+ +V+ L N+VT ++L DEE YED+V DV+ EC+ YG V + IPR G K F+ F N+ EAKKA E+L R F R +
Sbjct: 136 TRQARRLYVGNIPF--GVSEEAMVDFFNDHMHESKLSQAPG--LPVLAVQVNHDKNFAFLEFRSVDETTQAMAFDGVMFQGQALKIRRPKDYQPVPGMSETPTVHVPGVVSTVVQDSPHKIFIGGLPNYLNEDQIKELLSSFGTLKA--FNLVKDSATSLSKGYAFCEYI----DHTKTTQSIAG----LNGMQLGEKK----LIVQRASVGAKNAQQ-----------SQLAVSVPGLELPQTSGPVTEVLCLMNMVTPEELMDDEE-YEDIVEDVKEECQKYGLVRSLEIPRPYQGVDVPGTGK--IFVEFMNAVEAKKAQEALSGRKFANRVV 439
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A7M7MFJ1_VARDE (Splicing factor U2AF subunit n=3 Tax=Gamasina TaxID=1723665 RepID=A0A7M7MFJ1_VARDE) HSP 1 Score: 102 bits (253), Expect = 4.820e-20 Identity = 98/358 (27.37%), Postives = 154/358 (43.02%), Query Frame = 0
Query: 77 GARPVPIMQPPLSN-------------TSKSRRLYIGNVPFHVGLTDTALTQFFSALYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP---------------------EVHNPSGMNLIPDVVNVRAVMELCDKLGGIASAPVQLAAIAASQTSDEQRTAPYAQASRNQTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEYKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPR-------SGIWKRTAFILFKNSSEAKKAVESLKKRVFDKRQI 393
G P ++ PP++ T ++RRLY+GN+PF G T+ + +F+ A G P V++ ++ D F F+E R E M F+G+ G+ L++ RP DY+P + + + +P+ +N V EL G + + L AS S YA A+ G L G G ++ L Q S AK P ++ G + PG+ P +V+ L NLVT D+L DEE+YED++ D+Q EC YG V+ I IPR +G+ K F+ F + ++ +KA ++L R F R +
Sbjct: 81 GQIPATLLAPPITTDHQPSQPVVGSTITRQARRLYVGNIPF--GCTEQEMIDYFNVQMHACAFAQAQGNP--VLACQINMDKNFAFLEFRSIDETTAAMSFDGINFKGQSLKIRRPHDYQPMPGMSEQPGSVIPGVVSTVVQDSPHKVFIGGLPNYLNEDQVRELLMSFGQLKA--FNLVKDTASGLSKGYAFCEYADAAITDEAIAG--------LNGMQLGEKK----LIVQRA---SVGAKNSSMAAPVQIQVPGMASGVPGSSGPATEVLCLMNLVTPDEL-RDEEEYEDILEDIQEECSKYGHVKSIEIPRPIDGVDVNGLGK--VFVEFNSIADCQKAQQALTGRKFSNRVV 414
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A1Y2CYT4_9BASI (Splicing factor U2AF subunit n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2CYT4_9BASI) HSP 1 Score: 101 bits (251), Expect = 6.660e-20 Identity = 104/385 (27.01%), Postives = 161/385 (41.82%), Query Frame = 0
Query: 56 SRPSYPPRDNNEVGMLNGS---PYGARPVPIMQPPLSNTSK-SRRLYIGNVPFHVGLTDTALTQFFSA-------LYIAGFGPNKPGEPL----PVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYR------PEVHNPSGMNL-IPDVVNV------------RAVMELCDKLGGIASAPVQLAAIAASQTSDEQRTAPYAQASRNQTERTGNVADGRPPLEGTNPGSRQT---GSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEYKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPRSGIWKR---------------TAFILFKNSSEAKKAVESLKKRVF 388
SRPS P + M + S P RP M P+ + ++ SRRLY+GN+ T+ LT FF++ L G G + G L PVIS L+ + + F+E R +EA N + F+G+ L++ RP DY P H P ++ +PD +N VMEL G + S L + S Y S + G L G G R +SL + +R G + +P+ + S A E KV+ + N+V ++L GDE DY++++ D++ ECE +G VEE+ IPR + + F+LF+ E +A+ ++ R F
Sbjct: 11 SRPSLPVSMTGAMSMTDSSNPPPLFFRPPGSMAAPIGSFARQSRRLYVGNITMDA--TEEVLTHFFNSKMAELGLLSDKGLGEDLQGLGLKGDQPVISVHLNYEKNYAFVEFRNAEEATNALGFDGIIFQNAALKIRRPKDYMGPDADGPAPHVPGVVSSNVPDTINKIFIGGLPSYLTDDQVMELLKSFGELRS--FNLVKEGGTGASKGFAFCEYVDPSLTEVACQG--------LNGMELGDRYLVVQRASLGASARRDGQMTGSNSIDFPSQPLATAPSILAASAGEGQPTKVLQILNMVAPEELVGDE-DYQEIMEDIKEECEKFGKVEEVKIPRPVVTDKGKVDVKLSEAVKDLGKVFVLFEKEEETTRALRAIAGRQF 382
BLAST of Gvermi6641.t1 vs. uniprot
Match: T1JXY2_TETUR (Splicing factor U2AF subunit n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1JXY2_TETUR) HSP 1 Score: 100 bits (248), Expect = 1.740e-19 Identity = 99/346 (28.61%), Postives = 153/346 (44.22%), Query Frame = 0
Query: 77 GARPVPIMQPPLSNTSKSRRLYIGNVPFHVGLTDTALTQFF-SALYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP--------EVHNPSGMNLI-------------PDVVNVRAVMELCDKLGGIASAPVQLAAIAASQTSDEQRTAPYAQASRNQTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEYKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPRS-------GIWKRTAFILFKNSSEAKKAVESLKKRVFDKRQI 393
G PVPI+ L T ++RRLY+GN+PF G ++ + +FF S ++ GF PG P V++ ++ D F F+E R E + M F+G+ G+ L++ RP DY+P ++ P ++ + P+ +N V EL G QL A + S + YA T G L G G ++ S + G A P ++ G V+ G QP +V+ L N+VT +L DEE Y+D++ D++ EC YG V I IPR G+ K F+ F E ++A ++L R F R +
Sbjct: 63 GTVPVPIVGSTL--TRQARRLYVGNIPF--GCSEEEMMEFFNSQMHACGFA-QAPGNP--VLASQINLDKNFAFLEFRSIDETTSAMAFDGIAFKGQSLKIRRPHDYQPMPGMSEIPQITVPGVISTVVADSPHKIFIGGLPNYLNEDQVKELLMSFG-------QLRAFNLVKDSATGLSKGYAFCEYADVNITDQAIAG---LNGMQLGDKKLIVQRASVGAKSGPLAQPGAALAAPVQIQVPGLQVVSTGLGQP-TEVLCLMNMVTAQELSDDEE-YDDILKDIEEECSKYGVVRSIEIPRPIPGVEIPGVGK--VFVEFSTIPECQRAQQALTGRKFSDRVV 387
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A023GDV6_AMBTT (Splicing factor U2AF subunit (Fragment) n=1 Tax=Amblyomma triste TaxID=251400 RepID=A0A023GDV6_AMBTT) HSP 1 Score: 96.3 bits (238), Expect = 5.690e-18 Identity = 104/364 (28.57%), Postives = 161/364 (44.23%), Query Frame = 0
Query: 68 VGMLNGSPYGARPVP--IMQPPLSN-------TSKSRRLYIGNVPFHVGLTDTALTQFFSA-LYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP--------EVHNPSGMNLI-------------PDVVNVRAVMELCDKLGGIASAPVQLAAIAASQTSDEQRTAPYAQASRNQTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEYKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPRS-------GIWKRTAFILFKNSSEAKKAVESLKKRVFDKRQI 393
+G L G G P+P I+QPP + T ++RRLY+GN+PF G ++ + +F+A ++ GF PG P V++ ++ D F F+E R E M F+G+ G+ L++ RP DY+P V P ++ + P+ +N V EL G QL A + S + YA + T G L G G ++ L Q G+ ++ + AP V+ G P +V+ L NLV ++L DEE+YED++ D+ EC YG V+ I IPR G K A++ F + + +KA +SL R F R +
Sbjct: 112 IGSL-GXXXGVPPIPQAIVQPPAAVPIVGGTITRQARRLYVGNIPF--GCSEEEMMDYFNAQMHACGFS-QAPGNP--VLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGMSETPSVAVPGVISTVVQDSPHKIFIGGLPNYLNEDQVRELLMSFG-------QLRAFNLVKDSATGLSKGYAFCEYVEVSTTDQAIMG---LNGMQLGDKK----LIVQRASVGAKNSQMNQAP----VQIQVPGLQLQGGAGPPTEVLCLMNLVCPEELK-DEEEYEDILEDIHEECNKYGVVKSIEIPRPIDGVEVPGCGK--AYVEFNSVIDCQKAQQSLTGRKFSNRVV 448
BLAST of Gvermi6641.t1 vs. uniprot
Match: A0A8C4N7F7_EPTBU (Splicing factor U2AF subunit n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4N7F7_EPTBU) HSP 1 Score: 95.5 bits (236), Expect = 8.150e-18 Identity = 95/318 (29.87%), Postives = 148/318 (46.54%), Query Frame = 0
Query: 91 TSKSRRLYIGNVPFHVGLTDTALTQFFS-ALYIAGFGPNKPGEPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP--------EVHNPSGMN-LIPDVVNVRAVMELCDKLGGIASAPVQLAAIAASQTSDEQRTAPYAQASRNQTERTGNVADGRPPLEGTNPGSRQTGSSLTSQDQRPGSTAAKQDVAPRPEPVKRSGSSPVAPGNEQPEYKVISLENLVTDDDLDGDEEDYEDLVADVQAECENYGSVEEIVIPR-------SGIWKRTAFILFKNSSEAKKAVESLKKRVFDKR 391
T ++RRLY+GN+PF G T+ A+ +FF+ + +AG PG P V++ ++ D F F+ELR EA N + F+G+ G+ L++ RP DY P +VH P ++ ++PD N V GG+ P LA + + + Q ++ + G + G + L Q S AK VAP V V QP +++ L N+VT ++L DEE+Y D++ D++ EC YG V I IPR +G K F+ F ++ +KA ++L R F R
Sbjct: 124 TRQARRLYVGNIPF--GATEDAMVEFFNNQMKLAGLA-TAPGSP--VLAVQINLDKNFAFLELRSVDEATNALAFDGILFMGQNLKLRRPHDYTPLPGLSEGPQVHVPGVVSTVVPDTPNKVFV-------GGL---PTYLA---------DDQVIMHLQEGVRESAKGGQYGYISKIVVTALNGMQVGDKKLVVQRA---SVGAKAPVAPVTVQVPGLDVPDVLQQGTQP-TRILCLLNMVTPEELI-DEEEYNDILDDIREECNKYGPVVSIEIPRPVDGIEVAGCGK--IFVEFATVTDCQKAQQALSGRKFANR 410 The following BLAST results are available for this feature:
BLAST of Gvermi6641.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi6641.t1 ID=Gvermi6641.t1|Name=Gvermi6641.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=421bpback to top |