Gvermi6688.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6688.t1
Unique NameGvermi6688.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length312
Homology
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BLAST of Gvermi6688.t1 vs. uniprot
Match: A0A2V3IN94_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN94_9FLOR)

HSP 1 Score: 132 bits (331), Expect = 1.290e-32
Identity = 98/282 (34.75%), Postives = 145/282 (51.42%), Query Frame = 0 
Query:   35 SLGPNGIPKASSITRSPQAFFSEDGDFG-VLDIFVDSMDFELHETVRSLRFTAASTNISNLFPSTPRSEITLPPSSLTKNKLLDDENHSQVGGTVDNHMLYNGVEQSEEMTVGEGEEGQNTSKTGIV------KPLSAEALVKARCEIDALEIEPVTPLRAEEEEAFEPES-RTFSLSPRSRKILEKLSIRRDKKGASKTAXXXXXXXXXXXXXXXXXXXXX--KLASGLERLFSRISNTSKAQDQGD-DEPRASQESFIIHASPQNKLKSKLAKWKGNIGK 305
            S  P G+PK+SSIT SP A   EDGDFG +LD+ VDS  FE+ ++ RS+RFT AS+ +S+LFP +PRS+    P+SL   K +D    + +   V    + N  +     +  +         TG++      K LS E L   + +++A  IEPVTP       + E E  R F   P+S K+ EK SIRR+K+  S +                        +L SGL+RLFSR+SN S+  ++ + D PR+S    +   +P  K K+  A+W+ +I K
Sbjct:   28 SFSPRGVPKSSSITCSPSALRDEDGDFGFLLDMTVDSGPFEMDDSTRSIRFTLASSQVSHLFPQSPRSQSLQLPTSL---KSVDGSEENDLSVKVSQERVSNYWQSETHESTSDQSGTPMDGVTGLLPASIEAKTLSPETLTVVKRDLEAFSIEPVTPPGTRGNNSDEREHWRPFPTPPKSLKLFEKFSIRREKRDRSPSTMEYDEQELVNGGAQSPDSPTPLRRLTSGLDRLFSRVSNISRTDERNNGDGPRSSAAPEV--PTPPRKTKTTFARWRKDIRK 304
The following BLAST results are available for this feature:
BLAST of Gvermi6688.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IN94_9FLOR1.290e-3234.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1936244..1937179 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6688.t1Gvermi6688.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1936244..1937179 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6688.t1 ID=Gvermi6688.t1|Name=Gvermi6688.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=312bp
MEGNTLVHHAVTPQKTINVSSAPDRSVPTLKSPYSLGPNGIPKASSITRS
PQAFFSEDGDFGVLDIFVDSMDFELHETVRSLRFTAASTNISNLFPSTPR
SEITLPPSSLTKNKLLDDENHSQVGGTVDNHMLYNGVEQSEEMTVGEGEE
GQNTSKTGIVKPLSAEALVKARCEIDALEIEPVTPLRAEEEEAFEPESRT
FSLSPRSRKILEKLSIRRDKKGASKTAEKASPKAEDEKTAQPASQPLSKL
ASGLERLFSRISNTSKAQDQGDDEPRASQESFIIHASPQNKLKSKLAKWK
GNIGKFFGHSS*
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