Gvermi5614.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5614.t1
Unique NameGvermi5614.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length222
Homology
BLAST of Gvermi5614.t1 vs. uniprot
Match: R7QNR0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNR0_CHOCR)

HSP 1 Score: 282 bits (722), Expect = 1.850e-93
Identity = 130/194 (67.01%), Postives = 155/194 (79.90%), Query Frame = 0
Query:   28 LRTATFLAVGQTFSGTQTVNTSSSQSKGADEWRVNVVIQGLDLNRGTICGSMEALDVPKAVSPVVTFWEGQIIDNRNHYFWTAQWDADVDXXXDHWRKFVAFAPLHQRVKCDRGDDIDLSQLRYVFMRWKEIFFVSPDEECNLTIAGFYYVCMDRLTGAILGFYYDPHSQPYQRLQLNADSTCSGASFADYHFN 221
            L  A+FLA GQTFSG+QTVN    Q+K ADEWRVNV IQ +D  RG I GSMEALDVPKA +PVVTFWEG+I+DNRN++FWT +W+A V+   DHW++FV F+ LH RVK DRGDDIDL+  RY+FMRWKE+FFVSP E+C LTIAGFYY+CMDR TG++LG+YYDP SQPYQ L+LNA S   G  F+ Y FN
Sbjct:   54 LPPASFLAPGQTFSGSQTVN--QYQAKPADEWRVNVHIQAVDWQRGRISGSMEALDVPKAAAPVVTFWEGEIVDNRNYFFWTGRWEAHVEQDVDHWKRFVGFSRLHARVKKDRGDDIDLATCRYIFMRWKEVFFVSPGEDCGLTIAGFYYICMDRFTGSMLGYYYDPKSQPYQELRLNAVSLPGGHVFSSYDFN 245          
BLAST of Gvermi5614.t1 vs. uniprot
Match: A0A2V3IDX0_9FLOR (Glucose-induced degradation protein 4-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDX0_9FLOR)

HSP 1 Score: 276 bits (707), Expect = 1.090e-92
Identity = 126/143 (88.11%), Postives = 133/143 (93.01%), Query Frame = 0
Query:   79 MEALDVPKAVSPVVTFWEGQIIDNRNHYFWTAQWDADVDXXXDHWRKFVAFAPLHQRVKCDRGDDIDLSQLRYVFMRWKEIFFVSPDEECNLTIAGFYYVCMDRLTGAILGFYYDPHSQPYQRLQLNADSTCSGASFADYHFN 221
            MEALDVPKAVSPVVTFWEGQIIDNRNH+FWTA+WDADV    DHWRKF AF P+HQRVK DRGDDIDLSQ+RYVFMRWKEIFFVSPDEECNLTIAGFYYVCMDRLTGAILGFYYDP+SQPYQRLQLNA ST +G+SFADY FN
Sbjct:    1 MEALDVPKAVSPVVTFWEGQIIDNRNHFFWTAKWDADVHNDVDHWRKFTAFTPIHQRVKRDRGDDIDLSQMRYVFMRWKEIFFVSPDEECNLTIAGFYYVCMDRLTGAILGFYYDPNSQPYQRLQLNAVSTSTGSSFADYEFN 143          
BLAST of Gvermi5614.t1 vs. uniprot
Match: UPI0005D31346 (glucose-induced degradation protein 4 homolog n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0005D31346)

HSP 1 Score: 221 bits (563), Expect = 8.920e-70
Identity = 107/194 (55.15%), Postives = 138/194 (71.13%), Query Frame = 0
Query:   28 LRTATFLAVGQTFSGTQTVNTSSSQSKGADEWRVNVVIQGLDLNRGTICGSMEALDVPKAVSPVVTFWEGQIIDNRNHYFWTAQWDADVDXXXDHWRKFVAFAPLHQRVKCDRGDDIDLSQLRYVFMRWKEIFFVSPDEECNLTIAGFYYVCMDRLTGAILGFYYDPHSQPYQRLQLNADSTC-SGASFADYHF 220
            L   T L+VGQ F+GTQ  N SS Q + A  WRVNV IQG DL+ G +CG+MEAL+VP A +PVVTFWEG+I+DN+N+ F+T +WDA  D    HW KF +F+PL  +V+ D G  +DLS   Y+FMRWKE++FV+  ++C LTIAGFYYVC     G+I GFYYDP+S P+Q+L+L A S   SG SF+ Y F
Sbjct:   23 LSPCTLLSVGQAFAGTQ--NVSSIQKEEA--WRVNVRIQGCDLDHGYLCGTMEALNVPLAETPVVTFWEGEIVDNKNYTFFTGKWDAKPDNDVRHWSKFQSFSPLQNQVEADGGKSLDLSNYPYIFMRWKELYFVNVGKDCGLTIAGFYYVCFSCSDGSINGFYYDPNSSPFQKLELKATSEGKSGFSFSSYEF 212          
BLAST of Gvermi5614.t1 vs. uniprot
Match: A0A2R6X3P8_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X3P8_MARPO)

HSP 1 Score: 219 bits (559), Expect = 2.140e-69
Identity = 110/199 (55.28%), Postives = 138/199 (69.35%), Query Frame = 0
Query:   23 PPPRRLRTATFLAVGQTFSGTQTVNTSSSQSKGADEWRVNVVIQGLDLNRGTICGSMEALDVPKAVSPVVTFWEGQIIDNRNHYFWTAQWDADVDXXXDHWRKFVAFAPLHQRVKCDRGDDIDLSQLRYVFMRWKEIFFVSPDEECNLTIAGFYYVCMDRLTGAILGFYYDPHSQPYQRLQLNADSTC-SGASFADYHF 220
            PPP      TFL VGQ F+GTQ  N SS Q   A  W+VNV +QG D+ +G +CGSMEAL+VP A +PVVTFWEG+I+DN+N+ F+T QWDA  D   +HW KF +FA L + VK D G  +DL+   ++FMRWKE FFV+   +C LTIAGFYYVC  R  G++ GFYYDP+S PYQ+L+L A +   SG SFA Y F
Sbjct:    7 PPP-----CTFLNVGQAFTGTQ--NVSSGQKDEA--WKVNVRLQGCDIQKGYLCGSMEALNVPSAETPVVTFWEGEIVDNKNYTFFTGQWDATRDTDVNHWDKFPSFAALKEDVKRDGGRSVDLANYPFMFMRWKEKFFVNVGTDCGLTIAGFYYVCFSRSNGSVNGFYYDPNSSPYQKLELMATNEGRSGYSFATYKF 196          
BLAST of Gvermi5614.t1 vs. uniprot
Match: D8QZM2_SELML (Uncharacterized protein FHY1-1 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QZM2_SELML)

HSP 1 Score: 218 bits (555), Expect = 8.670e-69
Identity = 109/199 (54.77%), Postives = 135/199 (67.84%), Query Frame = 0
Query:   23 PPPRRLRTATFLAVGQTFSGTQTVNTSSSQSKGADEWRVNVVIQGLDLNRGTICGSMEALDVPKAVSPVVTFWEGQIIDNRNHYFWTAQWDADVDXXXDHWRKFVAFAPLHQRVKCDRGDDIDLSQLRYVFMRWKEIFFVSPDEECNLTIAGFYYVCMDRLTGAILGFYYDPHSQPYQRLQLNADSTC-SGASFADYHF 220
            PPP      +FL VGQ F+G Q  N S+SQ + A  W+VNV +QG D+  G +CGSMEAL+VP A +PVVTFWEGQI+DNRN+ F+T QWDA  D    HW KF +F PL   V+ D G  +DL+    +FMRWKE FFV+   +C LTIAGFYYVC  R  GA+ GFYYDP+S P+Q+L L A +   +GASFA Y F
Sbjct:    7 PPP-----CSFLQVGQAFTGIQ--NVSNSQKEEA--WKVNVRLQGCDIQHGYLCGSMEALNVPSAETPVVTFWEGQIVDNRNYTFFTGQWDASPDTDVKHWSKFSSFLPLSDTVERDGGRSLDLATYPSIFMRWKEKFFVNVGADCGLTIAGFYYVCFSRNNGAVQGFYYDPNSSPFQKLDLKATNEGRAGASFASYQF 196          
BLAST of Gvermi5614.t1 vs. uniprot
Match: A0A2K1KFH4_PHYPA (Uncharacterized protein n=6 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KFH4_PHYPA)

HSP 1 Score: 216 bits (551), Expect = 3.510e-68
Identity = 108/199 (54.27%), Postives = 135/199 (67.84%), Query Frame = 0
Query:   23 PPPRRLRTATFLAVGQTFSGTQTVNTSSSQSKGADEWRVNVVIQGLDLNRGTICGSMEALDVPKAVSPVVTFWEGQIIDNRNHYFWTAQWDADVDXXXDHWRKFVAFAPLHQRVKCDRGDDIDLSQLRYVFMRWKEIFFVSPDEECNLTIAGFYYVCMDRLTGAILGFYYDPHSQPYQRLQLNADSTC-SGASFADYHF 220
            PPP      TFL VGQ F+GTQ  N S+ Q   A  W+VNV +QG+D+  G +CGSMEAL+VP A +PVVTFWEG+I+DNRN+ F+T QWDA  +    HW KF +F  L + V+ D G  IDL    Y+FMRWKE FFV+   +C LTIAGFYYVC  R  G++ GFYYDP+S PYQ+L+L A +   +G SFA Y F
Sbjct:    7 PPP-----CTFLNVGQAFAGTQ--NVSNMQKDEA--WKVNVRLQGVDMQSGYLCGSMEALNVPAAETPVVTFWEGEIVDNRNYSFYTGQWDATKETDVKHWSKFASFLELREEVQKDGGKSIDLVNHPYIFMRWKEKFFVNVGTDCGLTIAGFYYVCFSRSDGSVNGFYYDPNSSPYQKLELKATNEGRAGHSFATYQF 196          
BLAST of Gvermi5614.t1 vs. uniprot
Match: A9NNZ9_PICSI (Uncharacterized protein n=3 Tax=Pinidae TaxID=3313 RepID=A9NNZ9_PICSI)

HSP 1 Score: 217 bits (552), Expect = 1.740e-67
Identity = 109/199 (54.77%), Postives = 136/199 (68.34%), Query Frame = 0
Query:   23 PPPRRLRTATFLAVGQTFSGTQTVNTSSSQSKGADEWRVNVVIQGLDLNRGTICGSMEALDVPKAVSPVVTFWEGQIIDNRNHYFWTAQWDADVDXXXDHWRKFVAFAPLHQRVKCDRGDDIDLSQLRYVFMRWKEIFFVSPDEECNLTIAGFYYVCMDRLTGAILGFYYDPHSQPYQRLQLNADSTC-SGASFADYHF 220
            PPP  L     L+VGQ F+GTQ  N S+SQ   A  W+VNV +QG DL  G +CGSMEAL+VP A +PVVTFWEG+I+DNRN+ F T +W+A  D    HW KF  FAPL  +V+ D G  +DLS   Y+FMRWKE FFV+   +C LTIAGFYYVC  R  G++ GFYYDP+S P+Q+L+L A +   +G SFA Y F
Sbjct:   68 PPPCML-----LSVGQAFAGTQ--NVSNSQKDEA--WKVNVRLQGCDLEHGYLCGSMEALNVPSAETPVVTFWEGEIVDNRNYTFLTGKWEAMKDTDVRHWSKFQCFAPLLNQVELDGGRSVDLSNYPYIFMRWKEKFFVNVGTDCGLTIAGFYYVCFSRSDGSVSGFYYDPNSSPFQKLELKATNEGRAGYSFASYEF 257          
BLAST of Gvermi5614.t1 vs. uniprot
Match: A0A1U8IVS4_GOSHI (glucose-induced degradation protein 4 homolog isoform X1 n=28 Tax=Malvaceae TaxID=3629 RepID=A0A1U8IVS4_GOSHI)

HSP 1 Score: 214 bits (545), Expect = 4.940e-67
Identity = 111/219 (50.68%), Postives = 144/219 (65.75%), Query Frame = 0
Query:    1 MLVGETSPSSPDSLSRDHRDHPPPPRRLRTATFLAVGQTFSGTQTVNTSSSQSKGADEWRVNVVIQGLDLNRGTICGSMEALDVPKAVSPVVTFWEGQIIDNRNHYFWTAQWDADVDXXXDHWRKFVAFAPLHQRVKCDRGDDIDLSQLRYVFMRWKEIFFVSPDEECNLTIAGFYYVCMDRLTGAILGFYYDPHSQPYQRLQLNADSTC-SGASFADY 218
            M V  T  S+P  +S  +     PP R    T L+VGQTFSGTQ  N SS Q + A  WRVNV IQG DL  G +CG+MEAL+VP A +PVVTFWEG+I+D  N+ F+T +W+A  +    HW KF +F+PL  +V+ D G  +DLS   Y+FMRWKE +FV+   +C LTIAGFYYVC     G+I GFYYDP+S P+Q+L+L + +   SG SF+ Y
Sbjct:    1 MPVRVTESSTPSQVSGTNSGDTSPPAR----TLLSVGQTFSGTQ--NVSSLQKEEA--WRVNVRIQGCDLEYGYLCGTMEALNVPMADTPVVTFWEGEIVDTNNYPFYTGKWEASPEDDKRHWTKFPSFSPLLSQVEVDGGKSLDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSISGFYYDPNSSPFQKLELKSTNEGRSGYSFSSY 211          
BLAST of Gvermi5614.t1 vs. uniprot
Match: A0A251ST40_HELAN (Putative vacuolar import/degradation protein Vid24 n=10 Tax=Asteraceae TaxID=4210 RepID=A0A251ST40_HELAN)

HSP 1 Score: 214 bits (544), Expect = 7.010e-67
Identity = 103/192 (53.65%), Postives = 137/192 (71.35%), Query Frame = 0
Query:   28 LRTATFLAVGQTFSGTQTVNTSSSQSKGADEWRVNVVIQGLDLNRGTICGSMEALDVPKAVSPVVTFWEGQIIDNRNHYFWTAQWDADVDXXXDHWRKFVAFAPLHQRVKCDRGDDIDLSQLRYVFMRWKEIFFVSPDEECNLTIAGFYYVCMDRLTGAILGFYYDPHSQPYQRLQLNADSTC-SGASFADY 218
            L+  + L+VGQTFSGTQ  N SS Q + A  WRVNV IQG DLN G +CG+MEAL+VP A +PVVTFWEG+I+D +N+ F+T +W A  +   DHW KF +F+PL  +V+ D G  +DLS  +Y+FMRWKE +FV+   +C LTIAGFYYVC   + G+I G+YYDP+S P+Q+L+L   +   SG SF+ Y
Sbjct:   24 LQPCSLLSVGQTFSGTQ--NVSSPQKEEA--WRVNVRIQGCDLNHGYLCGTMEALNVPMADTPVVTFWEGEIVDTKNYTFFTNKWKATSEVDIDHWTKFPSFSPLLSQVEVDGGKSLDLSNYQYIFMRWKEQYFVNVGSDCGLTIAGFYYVCFSCVDGSINGYYYDPNSSPFQKLELKTTNEGRSGFSFSSY 211          
BLAST of Gvermi5614.t1 vs. uniprot
Match: V4S4P8_CITCL (Uncharacterized protein n=7 Tax=malvids TaxID=91836 RepID=V4S4P8_CITCL)

HSP 1 Score: 213 bits (543), Expect = 9.940e-67
Identity = 110/219 (50.23%), Postives = 142/219 (64.84%), Query Frame = 0
Query:    1 MLVGETSPSSPDSLSRDHRDHPPPPRRLRTATFLAVGQTFSGTQTVNTSSSQSKGADEWRVNVVIQGLDLNRGTICGSMEALDVPKAVSPVVTFWEGQIIDNRNHYFWTAQWDADVDXXXDHWRKFVAFAPLHQRVKCDRGDDIDLSQLRYVFMRWKEIFFVSPDEECNLTIAGFYYVCMDRLTGAILGFYYDPHSQPYQRLQLN-ADSTCSGASFADY 218
            M V     S+P  +S  H +   PP      + L VGQ FSGTQ  N S+ Q + A  WRVNV IQG DL  G +CG+MEAL+VP A +PVVTFWEG+I+D +N+ F+T +W+A  +    HW KF +FAPL  RV+ D G  +DLS   Y+FMRWKE +FV+   +C LTIAGFYYVC     G+I GFYYDP+S P+Q+L+L  A+   SG SF+ Y
Sbjct:    1 MPVRVAESSAPSQVSGAHSEESSPP----ICSLLTVGQAFSGTQ--NVSNLQKEEA--WRVNVRIQGCDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDAKNYTFYTGKWEATPEDDIRHWTKFPSFAPLLSRVEADGGKSLDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSINGFYYDPNSSPFQKLELKCANEGRSGFSFSSY 211          
The following BLAST results are available for this feature:
BLAST of Gvermi5614.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QNR0_CHOCR1.850e-9367.01Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IDX0_9FLOR1.090e-9288.11Glucose-induced degradation protein 4-like n=1 Tax... [more]
UPI0005D313468.920e-7055.15glucose-induced degradation protein 4 homolog n=1 ... [more]
A0A2R6X3P8_MARPO2.140e-6955.28Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
D8QZM2_SELML8.670e-6954.77Uncharacterized protein FHY1-1 n=2 Tax=Selaginella... [more]
A0A2K1KFH4_PHYPA3.510e-6854.27Uncharacterized protein n=6 Tax=Physcomitrium pate... [more]
A9NNZ9_PICSI1.740e-6754.77Uncharacterized protein n=3 Tax=Pinidae TaxID=3313... [more]
A0A1U8IVS4_GOSHI4.940e-6750.68glucose-induced degradation protein 4 homolog isof... [more]
A0A251ST40_HELAN7.010e-6753.65Putative vacuolar import/degradation protein Vid24... [more]
V4S4P8_CITCL9.940e-6750.23Uncharacterized protein n=7 Tax=malvids TaxID=9183... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018618Vacuolar import/degradation protein Vid24PFAMPF09783Vac_ImportDegcoord: 33..205
e-value: 3.9E-44
score: 150.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..26
NoneNo IPR availablePANTHERPTHR14534VACUOLAR IMPORT AND DEGRADATION PROTEIN 24coord: 14..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:751352..752017 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5614.t1Gvermi5614.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 751352..752017 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5614.t1 ID=Gvermi5614.t1|Name=Gvermi5614.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=222bp
MLVGETSPSSPDSLSRDHRDHPPPPRRLRTATFLAVGQTFSGTQTVNTSS
SQSKGADEWRVNVVIQGLDLNRGTICGSMEALDVPKAVSPVVTFWEGQII
DNRNHYFWTAQWDADVDHDVDHWRKFVAFAPLHQRVKCDRGDDIDLSQLR
YVFMRWKEIFFVSPDEECNLTIAGFYYVCMDRLTGAILGFYYDPHSQPYQ
RLQLNADSTCSGASFADYHFN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018618Vacuolar_import/degrad_Vid24