Gvermi7667.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7667.t1
Unique NameGvermi7667.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length358
Homology
BLAST of Gvermi7667.t1 vs. uniprot
Match: A0A2V3ICZ9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICZ9_9FLOR)

HSP 1 Score: 429 bits (1102), Expect = 2.950e-147
Identity = 217/339 (64.01%), Postives = 271/339 (79.94%), Query Frame = 0
Query:   11 MVVIGVKSQFVSLFITLATAVAELCWTTFVLLFITHQEQRKLETGSSLSVRGHQRKIILVLAACVIAFVVIEIVVGAQIEDDLTMDPFIEPCLQTGINTGKEFTSAEQPLKSFTAQTSCSKFKNFRLEIFLSNISLTSPIVSCGEDRVFELHIRDQPMRKLKQAKPYCGEDFWGYQFCSFTRLQNDVFSFTDPLYEDEMSANETKFTDVKLYFQPESQDKISQRLITIISNGETHTDIDAILYRVLLGSRQATCTFFEARRVTRVPGAVVGLLVSIWCCSIILFVGLTCCERKVMFDLNNSCDWSKVLLPPRGISNENIVDATVSVENVNETPVYVLQL 349
            MVVIGVKSQ VSLFITLATAVAEL +TT VLLFI+ +E  KLE G SLSVRGHQR +   LAAC+ AF+++EI+VGA IED+L M PF EPC+QTGINTG+EFTS EQP +S+ AQTSCSKFK+F L+IFL+N S+TS +VSC ++ V+ELHIRD+  R++ QAKPYCGE+ WG  FCSFT L+   FSFT+ L E E S NETKF DVKL+F+P+SQD IS+RL+ +I +GE+  D+DAIL RVLLGSR +TCTFF+AR  TRVP  ++ +LVSIW CSI+LFV + C  RK++FDLN S DWSKVLLPP G++++ I DA +S  +V++T VY LQL
Sbjct:    1 MVVIGVKSQVVSLFITLATAVAELSFTTGVLLFISSREWSKLENGKSLSVRGHQRVVSQTLAACIAAFIIVEIIVGASIEDELRMTPFTEPCVQTGINTGQEFTSIEQPSRSYLAQTSCSKFKDFWLQIFLTNFSVTSTVVSCADEPVYELHIRDRSRRQIGQAKPYCGENEWGVTFCSFTSLETGTFSFTELLDEGEKSMNETKFIDVKLFFEPDSQDIISKRLLRVILHGESAMDLDAILSRVLLGSRLSTCTFFKARNATRVPVVLMCVLVSIWLCSILLFVCVACSSRKMLFDLNKSLDWSKVLLPPMGVNDKGIDDAMISTRSVDDTQVYFLQL 339          
BLAST of Gvermi7667.t1 vs. uniprot
Match: A0A2V3J5A0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A0_9FLOR)

HSP 1 Score: 66.6 bits (161), Expect = 1.500e-8
Identity = 75/331 (22.66%), Postives = 136/331 (41.09%), Query Frame = 0
Query:   11 MVVIGVKSQFVSLFITLATAVAELCWTTFVLLFITHQEQRKLETGSSLSVRGHQRKIILVLAACVIAFVVIEIVVGAQIEDDLTMDPFIEPCLQTGINT---GKEFTSAEQPLKSFTAQTSCSKFKNFRLEIFLSNISLTSPIVSCGEDRVFELHIRDQPMRKLKQA------KPY------CGEDFWGY-QFCSFTRLQNDVFS-FTDPLYEDEMSA-----NETKFTDVKLYFQPESQD---KISQRLITIISNGETHTDIDAILYRVLLGSRQATCTFFEARRVTRVPGAVVGLLVSIWCCSIILFVGLTCCERKVMFDLNNSCDWSK 316
            MV+I +KSQ+VSL  T+ + + EL     +L    + E   L+ G  +SV  HQ +   ++     AF  IE+++    +  + +    +PC+     T   G   TS E+         SC K     + + + N S+ +  V C E       +       +  A       P+      C + F    Q  S+    +D    F+D  + DE+S      +  KF +  ++    + +   K ++RL+   +  E   D   +   + LGS + TC F      T VP  ++  + ++W  S+  +       R+V +D++N   W+K
Sbjct:    1 MVLIPLKSQYVSLINTIISLLTELSLLKALLRVNNYCECHALQKGHHVSVTRHQNRATCLVLVTTAAFFAIELLLSFYSDPAVKLTFQSQPCVAVETLTRRSGDPGTSLEE----IGIVLSCVKTNESNIFLRVGNYSMETRKVECAESATLMFTLEPHVSLPIGTAAAVSSENPFPDPLLKCADGFCVVIQTASYQSSSSDTTVWFSDVFFADEVSMLQIDNSPIKFLNTTIFSAQNNTELLPKFAERLLQ--AYDENLNDPFELRRLMFLGSERDTCQFQRTSEATEVPPFIIVSVSTVWVISLAAYAMTLLLSRRVFYDISNPVHWAK 325          
The following BLAST results are available for this feature:
BLAST of Gvermi7667.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ICZ9_9FLOR2.950e-14764.01Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5A0_9FLOR1.500e-822.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 301..357
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..277
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 278..300
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 275..297
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 67..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:1623099..1624172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7667.t1Gvermi7667.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 1623099..1624172 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7667.t1 ID=Gvermi7667.t1|Name=Gvermi7667.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=358bp
MYVRLVCYKKMVVIGVKSQFVSLFITLATAVAELCWTTFVLLFITHQEQR
KLETGSSLSVRGHQRKIILVLAACVIAFVVIEIVVGAQIEDDLTMDPFIE
PCLQTGINTGKEFTSAEQPLKSFTAQTSCSKFKNFRLEIFLSNISLTSPI
VSCGEDRVFELHIRDQPMRKLKQAKPYCGEDFWGYQFCSFTRLQNDVFSF
TDPLYEDEMSANETKFTDVKLYFQPESQDKISQRLITIISNGETHTDIDA
ILYRVLLGSRQATCTFFEARRVTRVPGAVVGLLVSIWCCSIILFVGLTCC
ERKVMFDLNNSCDWSKVLLPPRGISNENIVDATVSVENVNETPVYVLQLR
RGTVAEK*
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