Gvermi14342.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGvermi14342.t1
Unique NameGvermi14342.t1
TypemRNA
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length165
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_5602contigScGOVlb_5602:1..495 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi14342Gvermi14342Gracilaria vermiculophylla HapMaleFtJ_2017 malegeneScGOVlb_5602 1..495 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi14342.t1.CDS1Gvermi14342.t1.CDS1Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_5602 1..495 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi14342.t1.exon1Gvermi14342.t1.exon1Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_5602 1..495 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi14342.t1.start1Gvermi14342.t1.start1Gracilaria vermiculophylla HapMaleFtJ_2017 malestart_codonScGOVlb_5602 493..495 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi14342.t1Gvermi14342.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malepolypeptideScGOVlb_5602 1..495 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gvermi14342.t1 ID=Gvermi14342.t1|Name=Gvermi14342.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=165bp
MRQLCGSRVYQPYQRQFLGTLLQHLTGDLYDKMPLRDVADGHGVDIEVEV
DADDEVGESYRLTLSDSSSSSSSSSSSSSSSESDSSDEEDGGDAGADTVT
DADVAAAVADAAGFDTATADDNDDGSKFPGGVDIEDVIDDNDEAGFAGDV
NTNGNDDEHRGVGVG
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spliced messenger RNA

>Gvermi14342.t1 ID=Gvermi14342.t1|Name=Gvermi14342.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=495bp|location=Sequence derived from alignment at ScGOVlb_5602:1..495- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGTCAGCTGTGTGGCAGTCGCGTGTACCAGCCATATCAGCGTCAGTT
CCTGGGCACGCTGCTGCAGCATCTGACTGGCGACCTATACGACAAGATGC
CGTTACGCGACGTCGCCGACGGACACGGCGTCGACATTGAGGTGGAGGTC
GACGCCGACGATGAGGTGGGCGAGTCGTACCGACTCACGCTATCGGACTC
GTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGAGCGAGAGTG
ACAGCAGCGACGAGGAGGACGGCGGCGACGCCGGCGCGGACACTGTGACG
GACGCCGACGTCGCCGCCGCCGTGGCAGACGCGGCCGGTTTTGACACAGC
CACCGCTGACGACAACGACGATGGATCAAAGTTTCCCGGCGGCGTTGACA
TTGAGGACGTGATCGACGACAACGACGAAGCGGGCTTTGCCGGCGATGTC
AACACCAACGGCAACGACGACGAGCACCGTGGCGTGGGCGTCGGT
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protein sequence of Gvermi14342.t1

>Gvermi14342.t1 ID=Gvermi14342.t1|Name=Gvermi14342.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=165bp
MRQLCGSRVYQPYQRQFLGTLLQHLTGDLYDKMPLRDVADGHGVDIEVEV
DADDEVGESYRLTLSDSSSSSSSSSSSSSSSESDSSDEEDGGDAGADTVT
DADVAAAVADAAGFDTATADDNDDGSKFPGGVDIEDVIDDNDEAGFAGDV
NTNGNDDEHRGVGVG
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mRNA from alignment at ScGOVlb_5602:1..495-

Legend: CDSpolypeptideexonstart_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gvermi14342.t1 ID=Gvermi14342.t1|Name=Gvermi14342.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=495bp|location=Sequence derived from alignment at ScGOVlb_5602:1..495- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGCGTCAGCTGTGTGGCAGTCGCGTGTACCAGCCATATCAGCGTCAGTT
CCTGGGCACGCTGCTGCAGCATCTGACTGGCGACCTATACGACAAGATGC
CGTTACGCGACGTCGCCGACGGACACGGCGTCGACATTGAGGTGGAGGTC
GACGCCGACGATGAGGTGGGCGAGTCGTACCGACTCACGCTATCGGACTC
GTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGAGCGAGAGTG
ACAGCAGCGACGAGGAGGACGGCGGCGACGCCGGCGCGGACACTGTGACG
GACGCCGACGTCGCCGCCGCCGTGGCAGACGCGGCCGGTTTTGACACAGC
CACCGCTGACGACAACGACGATGGATCAAAGTTTCCCGGCGGCGTTGACA
TTGAGGACGTGATCGACGACAACGACGAAGCGGGCTTTGCCGGCGATGTC
AACACCAACGGCAACGACGACGAGCACCGTGGCGTGGGCGTCGGT
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Coding sequence (CDS) from alignment at ScGOVlb_5602:1..495-

>Gvermi14342.t1 ID=Gvermi14342.t1|Name=Gvermi14342.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=495bp|location=Sequence derived from alignment at ScGOVlb_5602:1..495- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGCGTCAGCTGTGTGGCAGTCGCGTGTACCAGCCATATCAGCGTCAGTT
CCTGGGCACGCTGCTGCAGCATCTGACTGGCGACCTATACGACAAGATGC
CGTTACGCGACGTCGCCGACGGACACGGCGTCGACATTGAGGTGGAGGTC
GACGCCGACGATGAGGTGGGCGAGTCGTACCGACTCACGCTATCGGACTC
GTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGAGCGAGAGTG
ACAGCAGCGACGAGGAGGACGGCGGCGACGCCGGCGCGGACACTGTGACG
GACGCCGACGTCGCCGCCGCCGTGGCAGACGCGGCCGGTTTTGACACAGC
CACCGCTGACGACAACGACGATGGATCAAAGTTTCCCGGCGGCGTTGACA
TTGAGGACGTGATCGACGACAACGACGAAGCGGGCTTTGCCGGCGATGTC
AACACCAACGGCAACGACGACGAGCACCGTGGCGTGGGCGTCGGT
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