Gvermi12721.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12721.t1
Unique NameGvermi12721.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length339
Homology
BLAST of Gvermi12721.t1 vs. uniprot
Match: A0A2V3IP67_9FLOR (Transcription factor MYB44 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP67_9FLOR)

HSP 1 Score: 155 bits (391), Expect = 7.870e-41
Identity = 97/222 (43.69%), Postives = 138/222 (62.16%), Query Frame = 0
Query:  121 RQVPFRTTSHTPINQFSSMNAPQRNFRS--QEKPAGPSSQAMVPLPIAKRPAHMTL---DMRNRVGEESSLAVATSGSEP-----RVKRPWADQEDRLLRTLVDQMGQGLWANIALQIPGRSGKQVRERWLNHLSPNVTKRPWSKEEDEIIIKNHDMFGNCWSRIAKKLDGRSDNSVKNRYYTTLRRRMDRKGKNHPGSGKRSRSQQTNSEGSEEQPKQKLK 332
            R  P +TTS  P++   S  + Q N RS    +P   S +       + +P   T    + R    ++SS++ +    +P     R KRPW  QEDRLLR+LV++ G+  WA IA +IP R+GKQVRER+LN+LSP +++RP+SK+EDEIII+ H + GN WSRIAK L+GRSDNSVKNR+Y TL++R++   ++    GKRSR +Q   +   E+P Q  K
Sbjct:  113 RNNPQKTTS--PLSCARSQTSSQPNLRSPAHTQPVTESERIETQPNHSLQPERSTCIPSEHRKSYTDDSSISKSALVPDPYVHTPRAKRPWTSQEDRLLRSLVEKHGERDWAAIAEEIPHRTGKQVRERYLNYLSPKISQRPFSKQEDEIIIEKHRVLGNRWSRIAKFLNGRSDNSVKNRFYVTLKKRIEAS-RDSRQLGKRSRPEQKKQDDQTEEPIQPTK 331          
BLAST of Gvermi12721.t1 vs. uniprot
Match: A0A7S1TIW2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIW2_9RHOD)

HSP 1 Score: 138 bits (348), Expect = 2.830e-35
Identity = 65/118 (55.08%), Postives = 84/118 (71.19%), Query Frame = 0
Query:  182 EESSLAVATSGSEPRVKRPWADQEDRLLRTLVDQMGQGLWANIALQIPGRSGKQVRERWLNHLSPNVTKRPWSKEEDEIIIKNHDMFGNCWSRIAKKLDGRSDNSVKNRYYTTLRRRM 299
            +E+  A   +  E +VK PW  QED LL+ LV++ G   W  IA  IPGRSGKQ RERWLN LSP + KRPW++ ED II++ H   GN WS IAKKL+GR+DN+VKNR+ TT+RR++
Sbjct:  136 QETDDAPVRTTQEVKVKGPWRPQEDELLQRLVEKYGAKRWTLIANSIPGRSGKQARERWLNQLSPGLAKRPWTQAEDLIIVQEHARLGNKWSEIAKKLEGRTDNAVKNRFNTTIRRQL 253          
BLAST of Gvermi12721.t1 vs. uniprot
Match: A0A7S1XHT6_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XHT6_9RHOD)

HSP 1 Score: 138 bits (348), Expect = 2.030e-34
Identity = 65/118 (55.08%), Postives = 84/118 (71.19%), Query Frame = 0
Query:  182 EESSLAVATSGSEPRVKRPWADQEDRLLRTLVDQMGQGLWANIALQIPGRSGKQVRERWLNHLSPNVTKRPWSKEEDEIIIKNHDMFGNCWSRIAKKLDGRSDNSVKNRYYTTLRRRM 299
            +E+  A   +  E +VK PW  QED LL+ LV++ G   W  IA  IPGRSGKQ RERWLN LSP + KRPW++ ED II++ H   GN WS IAKKL+GR+DN+VKNR+ TT+RR++
Sbjct:  222 QETDDAPVRTTQEVKVKGPWRPQEDELLQRLVEKYGAKRWTLIANSIPGRSGKQARERWLNQLSPGLAKRPWTQAEDLIIVQEHARLGNKWSEIAKKLEGRTDNAVKNRFNTTIRRQL 339          
BLAST of Gvermi12721.t1 vs. uniprot
Match: A0A5J4Z7G3_PORPP (Myb-related protein A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7G3_PORPP)

HSP 1 Score: 132 bits (331), Expect = 2.270e-33
Identity = 70/160 (43.75%), Postives = 95/160 (59.38%), Query Frame = 0
Query:  144 RNFRSQEKPAGPSSQAMVPLPIAKRPAHMTLDMRNRVGEESSLAVA---TSGSEPRVKRPWADQEDRLLRTLVDQMGQGLWANIALQIPGRSGKQVRERWLNHLSPNVTKRPWSKEEDEIIIKNHDMFGNCWSRIAKKLDGRSDNSVKNRYYTTLRRRMD 300
            R  R  E P GP+  A+                 +    ES +A+    T     ++K PW  +ED LLR+LV +MG   W+ +A QIPGR+GKQ RERWLN LSP++ K PW++EED II+  H   GN WS IAK L+GR+DNSVKNR+ +T+++  D
Sbjct:   56 RRRRRTECPDGPAQSAV----------ETVSGSSSATASESVVALGDARTPTQGKKIKGPWRPEEDELLRSLVAKMGPRRWSLVAAQIPGRTGKQSRERWLNQLSPSLAKAPWTEEEDMIIMDAHSRLGNRWSEIAKLLNGRTDNSVKNRFNSTIKKLYD 205          
BLAST of Gvermi12721.t1 vs. uniprot
Match: A0A5J4YPN6_PORPP (Transcriptional activator Myb n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPN6_PORPP)

HSP 1 Score: 139 bits (349), Expect = 3.020e-33
Identity = 65/107 (60.75%), Postives = 81/107 (75.70%), Query Frame = 0
Query:  193 SEPRVKRPWADQEDRLLRTLVDQMGQGLWANIALQIPGRSGKQVRERWLNHLSPNVTKRPWSKEEDEIIIKNHDMFGNCWSRIAKKLDGRSDNSVKNRYYTTLRRRM 299
            S P+VK PW  +EDRLL  LV + G   W  IA QIPGR+GKQ RERWLNHL+P++T+RPW+ EED  I++ H   GN WS IAK LDGR+DN+VKNR+ TT+RR+M
Sbjct:  427 SIPKVKGPWKAEEDRLLMDLVRKHGPKNWPTIAAQIPGRTGKQARERWLNHLNPDLTRRPWTAEEDLAIMEAHAKLGNRWSEIAKILDGRTDNAVKNRFNTTIRRQM 533          
BLAST of Gvermi12721.t1 vs. uniprot
Match: A0A7S2ZT13_9RHOD (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT13_9RHOD)

HSP 1 Score: 129 bits (323), Expect = 1.120e-32
Identity = 59/107 (55.14%), Postives = 77/107 (71.96%), Query Frame = 0
Query:  195 PRVKRPWADQEDRLLRTLVDQMGQGLWANIALQIPGRSGKQVRERWLNHLSPNVTKRPWSKEEDEIIIKNHDMFGNCWSRIAKKLDGRSDNSVKNRYYTTLRRRMDR 301
            PR KR W   ED LLR+LV++ G   W  IA  IPGR+GKQ RERWLN L P + ++ W+ EED+III+ H  +GN WS IA +L GR+DNS+KNR+ +TL+RR+ R
Sbjct:   58 PRGKRAWTKAEDVLLRSLVEKHGPNRWTLIAKNIPGRTGKQARERWLNQLDPELKRKGWTAEEDQIIIRAHAQYGNKWSLIASQLKGRTDNSIKNRFNSTLKRRLQR 164          
BLAST of Gvermi12721.t1 vs. uniprot
Match: A0A7S2ZT18_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT18_9RHOD)

HSP 1 Score: 129 bits (323), Expect = 5.330e-32
Identity = 59/107 (55.14%), Postives = 77/107 (71.96%), Query Frame = 0
Query:  195 PRVKRPWADQEDRLLRTLVDQMGQGLWANIALQIPGRSGKQVRERWLNHLSPNVTKRPWSKEEDEIIIKNHDMFGNCWSRIAKKLDGRSDNSVKNRYYTTLRRRMDR 301
            PR KR W   ED LLR+LV++ G   W  IA  IPGR+GKQ RERWLN L P + ++ W+ EED+III+ H  +GN WS IA +L GR+DNS+KNR+ +TL+RR+ R
Sbjct:   58 PRGKRAWTKAEDVLLRSLVEKHGPNRWTLIAKNIPGRTGKQARERWLNQLDPELKRKGWTAEEDQIIIRAHAQYGNKWSLIASQLKGRTDNSIKNRFNSTLKRRLQR 164          
BLAST of Gvermi12721.t1 vs. uniprot
Match: A0A7S0ZEJ7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEJ7_9RHOD)

HSP 1 Score: 129 bits (323), Expect = 6.060e-32
Identity = 58/104 (55.77%), Postives = 77/104 (74.04%), Query Frame = 0
Query:  196 RVKRPWADQEDRLLRTLVDQMGQGLWANIALQIPGRSGKQVRERWLNHLSPNVTKRPWSKEEDEIIIKNHDMFGNCWSRIAKKLDGRSDNSVKNRYYTTLRRRM 299
            R+K PW   ED +L++LV++MG   W+ IAL IPGR+GKQ RERWLN LSP + K PW+  ED II++ H   GN WS IAK L GRSDN+VKNR+ +T+R+++
Sbjct:  104 RIKGPWRSDEDEVLKSLVEKMGPRRWSLIALHIPGRTGKQARERWLNQLSPALNKIPWTAAEDLIIVEGHARLGNKWSEIAKLLKGRSDNAVKNRFNSTIRKQL 207          
BLAST of Gvermi12721.t1 vs. uniprot
Match: M1VAJ5_CYAM1 (MYB-related protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VAJ5_CYAM1)

HSP 1 Score: 133 bits (335), Expect = 6.250e-32
Identity = 74/184 (40.22%), Postives = 102/184 (55.43%), Query Frame = 0
Query:  129 SHTPINQFSSMNA-----------PQRNFR----SQEKPAGPSSQAMVPLPIAKRPAHMTLDMRNRVGEESSLAVATSGSEPRVKRPWADQEDRLLRTLVDQMGQGLWANIALQIPGRSGKQVRERWLNHLSPNVTKRPWSKEEDEIIIKNHDMFGNCWSRIAKKLDGRSDNSVKNRYYTTLRR 297
            S TP++ F++ NA           P   +R     +E    P + + V     +    ++    NR   +S+ +         VK PW  +ED LLR+LV++MG   W+ IA  IPGR+GKQ RERWLN LSP + KRPW+ EED III  H   GN WS IA+ L GR+DN+VKNR+ + +RR
Sbjct:  180 SGTPVDSFTTTNAHLAQGSLIQPEPVAMWRCWSPGEEPRVWPDTLSRVSSESKRSSPDVSSTPSNRAQVQSTPSARRVSERKEVKGPWRPEEDELLRSLVEKMGPRRWSLIAEHIPGRTGKQARERWLNQLSPQICKRPWTPEEDRIIISAHARLGNRWSEIARMLQGRTDNAVKNRFNSFIRR 363          
BLAST of Gvermi12721.t1 vs. uniprot
Match: A0A7S0ZEF3_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEF3_9RHOD)

HSP 1 Score: 133 bits (335), Expect = 7.670e-32
Identity = 64/119 (53.78%), Postives = 84/119 (70.59%), Query Frame = 0
Query:  181 GEESSLAVATSGSEPRVKRPWADQEDRLLRTLVDQMGQGLWANIALQIPGRSGKQVRERWLNHLSPNVTKRPWSKEEDEIIIKNHDMFGNCWSRIAKKLDGRSDNSVKNRYYTTLRRRM 299
            G  S+ +      E +VK PW  +EDRLL +LV++ G   W  IA +IPGR+GKQ RERWLN L+P++ KR W+KEED II++ H   GN WS IAK L GR+DNSVKNR+ TT+RR++
Sbjct:  290 GALSTHSTEHKDGESKVKGPWRPEEDRLLSSLVEKYGAKGWTVIASRIPGRTGKQARERWLNQLNPDLAKRTWTKEEDMIIMEMHARMGNRWSEIAKALKGRTDNSVKNRFNTTIRRQI 408          
The following BLAST results are available for this feature:
BLAST of Gvermi12721.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IP67_9FLOR7.870e-4143.69Transcription factor MYB44 n=1 Tax=Gracilariopsis ... [more]
A0A7S1TIW2_9RHOD2.830e-3555.08Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1XHT6_9RHOD2.030e-3455.08Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4Z7G3_PORPP2.270e-3343.75Myb-related protein A n=1 Tax=Porphyridium purpure... [more]
A0A5J4YPN6_PORPP3.020e-3360.75Transcriptional activator Myb n=1 Tax=Porphyridium... [more]
A0A7S2ZT13_9RHOD1.120e-3255.14Hypothetical protein (Fragment) n=2 Tax=Rhodosorus... [more]
A0A7S2ZT18_9RHOD5.330e-3255.14Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0ZEJ7_9RHOD6.060e-3255.77Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M1VAJ5_CYAM16.250e-3240.22MYB-related protein n=1 Tax=Cyanidioschyzon merola... [more]
A0A7S0ZEF3_9RHOD7.670e-3253.78Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 197..246
e-value: 4.8E-13
score: 59.3
coord: 249..297
e-value: 4.6E-16
score: 69.4
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 193..244
score: 10.731266
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 245..295
score: 10.301607
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 200..244
e-value: 6.29359E-13
score: 60.667
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 252..295
e-value: 1.41809E-13
score: 62.2078
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 201..259
e-value: 2.5E-15
score: 56.4
NoneNo IPR availableGENE3D1.10.10.60coord: 197..249
e-value: 3.9E-18
score: 67.1
NoneNo IPR availableGENE3D1.10.10.60coord: 251..333
e-value: 4.5E-19
score: 70.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 289..338
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..102
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 155..322
NoneNo IPR availablePANTHERPTHR45614:SF154TRANSCRIPTION FACTOR MYB98coord: 155..322
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 193..244
score: 18.458189
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 245..299
score: 24.27379
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 196..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1206097..1207113 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12721.t1Gvermi12721.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1206097..1207113 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12721.t1 ID=Gvermi12721.t1|Name=Gvermi12721.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=339bp
MSPDDQPQYQAGAPGHESRFPPSAPTSQMQYQLASSENHVRFHPATVGHH
VSYHPTPSGSSSQSAAAVAATAVKLTPLASHLPSQLPPQQLLQPQEPVMD
MEIDTRPRDPAPPIARQIQGRQVPFRTTSHTPINQFSSMNAPQRNFRSQE
KPAGPSSQAMVPLPIAKRPAHMTLDMRNRVGEESSLAVATSGSEPRVKRP
WADQEDRLLRTLVDQMGQGLWANIALQIPGRSGKQVRERWLNHLSPNVTK
RPWSKEEDEIIIKNHDMFGNCWSRIAKKLDGRSDNSVKNRYYTTLRRRMD
RKGKNHPGSGKRSRSQQTNSEGSEEQPKQKLKKSGPNE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf