Gvermi4225.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4225.t1
Unique NameGvermi4225.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length385
Homology
BLAST of Gvermi4225.t1 vs. uniprot
Match: A0A2V3J1H1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1H1_9FLOR)

HSP 1 Score: 358 bits (918), Expect = 4.770e-118
Identity = 181/347 (52.16%), Postives = 256/347 (73.78%), Query Frame = 0
Query:   37 TPRAAVSRADVFQHGIEAALEDHLVTGMNVCIGHGAKEVLGPLLDAIESMVKVERVIDVAFLGTCEETRSLIRERQLPNDLAVNFKRELDLFIAPVSRVDGECNAALDSSELGGARYAAHVASKVVLLCHEDDLQQSRNGLESIPVQLVDFMPDVAAKTLMSDSLFAAGVRGVTVRQGRGSIADVSIAGGSIPLIVEEELKRLPQVQAVGLLPAYGKTSVVVCARDLQPFDITPIGFSLAKSMENNRALTLNR--VREEVEQLGGSWTLSETQG----CGLHREFACPSEAAAEALMRQVQFLARNGGRFAELKQVGNKVMIGLGARGSSTVGDVDVLMAKAITNTY 377
            TP A VSRA VF++GIEAA+ED++ TGMN+CIG G  EVL P+LDAI SMV+VE ++DVAFLG+   T+SL++ER LP+D  VNF+  +DLF+APV RVDG+CNA L+SS++GG RYAA +A KVVL+ HEDD+ + +NGLESIPV+LVDF P  AA++L SD L+ AGVRG ++R G  +IADVSI+   IP+++E+ELK+L +V AVG+LPA+ KT++VV  +DLQPFDITP  +S ++++E+ R   ++   V +EV++LG  WT+S  +G    CG   E    +  AA+ ++R + FL +NGGRF EL+Q  N+V++ LG   ++ +   DV++AK +   Y
Sbjct:   72 TPIACVSRAKVFKYGIEAAVEDYVKTGMNICIGDGNDEVLVPMLDAIASMVEVEGLVDVAFLGSNPNTKSLLKERGLPSDTVVNFRSNVDLFLAPVGRVDGDCNAVLESSDMGGDRYAAQMADKVVLIVHEDDMSEYKNGLESIPVKLVDFSPQTAAQSLCSDCLYMAGVRGASLRSGDENIADVSISKSCIPVLLEQELKQLAEVVAVGMLPAFDKTTIVVSTKDLQPFDITPASYSFSRNVEDGRGDIVDESTVLDEVKKLGAGWTVSAEEGGLCLCG---ELKFDATEAADGMIRYMHFLRKNGGRFDELRQRKNRVLVRLGGEKANKMRRADVMIAKMVAQMY 415          
BLAST of Gvermi4225.t1 vs. uniprot
Match: R7QA91_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA91_CHOCR)

HSP 1 Score: 234 bits (596), Expect = 8.580e-70
Identity = 129/341 (37.83%), Postives = 210/341 (61.58%), Query Frame = 0
Query:   43 SRADVFQHGIEAALEDHLVTGMNVCIGHGAKEVLGPLLDAIESMVKVERVIDVAFLGTCEETRSLIRERQLPNDLAVNFKRELDLFIAPVSRVDGECNAALDSSELGGARYAAHVASKVVLLCHEDDLQQSRNGLESIPVQLVDFMPDVAAKTLMSDSLFAAGVRGVTVRQGRGSIADVSIAGGSIPLIVEEELKRLPQVQAVGLLPAYGKTSVVVCARDLQPFDITPI--GFSLAKSMENNRALTLNRVREEVEQLGGSWTL-SETQGCGLHREFACPSEAAAEALMRQVQFLARNGGRFAELKQVGNKVMIGLGARGSSTVGDVDVLMAKAITNTYARL 380
            SR  V ++GI+AA+ED + +G+N+ IG G  E +  L+DA++S+ +VE +IDVAF+     T +L+R+R +P+DLAVNFK+ LD+F+A V  VD +CNA + S  + G +YAAH+A KVVL+ HE++++ S+NGL S+P+Q+V+F+P +A ++L S  L   GVRG ++R  +  IAD+++A  +  L +E +L  + QV+  G+L +  KT  VV  RD QPFD+T      +L +S  +   LT  + RE + +   SW +    +G  L R F   +   A+A +R V F++R      E+      V + +   G+  + ++D L+AK + + Y R+
Sbjct:   61 SRDIVLKYGIDAAVEDFIKSGLNIGIGGGKTEEVTKLVDALDSLNQVEGLIDVAFVSASPTTAALLRDRGMPSDLAVNFKKGLDVFLALVDAVDADCNAVIGSDNISGDKYAAHMADKVVLVVHEENVENSKNGLRSVPIQMVNFLPGLATESLCSGVLVDLGVRGASLRTDQSHIADLALAPFTQLLALEHQLCSMAQVETSGILLSTEKTVAVVATRDCQPFDMTSSLSSMTLLESASSAVVLTEEKRREILGKYESSWIIVPHGEGELLSRTFKFVNVDCAQAFVRYVHFISRGAHYCPEIYHGNTFVEVRVNTEGNPGITELDTLIAKELASVYQRM 401          
The following BLAST results are available for this feature:
BLAST of Gvermi4225.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1H1_9FLOR4.770e-11852.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QA91_CHOCR8.580e-7037.83Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036428Pterin 4 alpha carbinolamine dehydratase superfamilyGENE3D3.30.1360.20Transcriptional coactivator/pterin dehydratasecoord: 251..378
e-value: 1.1E-6
score: 30.2
IPR036428Pterin 4 alpha carbinolamine dehydratase superfamilySUPERFAMILY55248PCD-likecoord: 285..377
IPR001533Pterin 4 alpha carbinolamine dehydratasePFAMPF01329Pterin_4acoord: 285..374
e-value: 1.5E-6
score: 28.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:793117..794271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4225.t1Gvermi4225.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 793117..794271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4225.t1 ID=Gvermi4225.t1|Name=Gvermi4225.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=385bp
MMAFISNPGQLWRTAPSNNRLVQKCAPRPRCAWRRSTPRAAVSRADVFQH
GIEAALEDHLVTGMNVCIGHGAKEVLGPLLDAIESMVKVERVIDVAFLGT
CEETRSLIRERQLPNDLAVNFKRELDLFIAPVSRVDGECNAALDSSELGG
ARYAAHVASKVVLLCHEDDLQQSRNGLESIPVQLVDFMPDVAAKTLMSDS
LFAAGVRGVTVRQGRGSIADVSIAGGSIPLIVEEELKRLPQVQAVGLLPA
YGKTSVVVCARDLQPFDITPIGFSLAKSMENNRALTLNRVREEVEQLGGS
WTLSETQGCGLHREFACPSEAAAEALMRQVQFLARNGGRFAELKQVGNKV
MIGLGARGSSTVGDVDVLMAKAITNTYARLRPIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036428PCD_sf
IPR001533Pterin_deHydtase