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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 3218.PP1S79_76V6.2 |
| Preferred name | NIA1 |
| PFAMs | Cyt-b5,FAD_binding_6,Mo-co_dimer,NAD_binding_1,Oxidored_molyb |
| Max annot lvl | 35493|Streptophyta |
| KEGG rclass | RC02812 |
| KEGG ko | ko:K10534 |
| KEGG Reaction | R00794,R00796 |
| KEGG Pathway | ko00910,ko01120,map00910,map01120 |
| KEGG Module | M00531 |
| GOs | GO:0001505,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005829,GO:0005886,GO:0006082,GO:0006807,GO:0006809,GO:0008150,GO:0008152,GO:0008940,GO:0009058,GO:0009314,GO:0009416,GO:0009605,GO:0009607,GO:0009608,GO:0009610,GO:0009620,GO:0009628,GO:0009703,GO:0009987,GO:0016020,GO:0016491,GO:0016661,GO:0017144,GO:0034641,GO:0042126,GO:0042128,GO:0042133,GO:0042136,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046209,GO:0046857,GO:0050896,GO:0051704,GO:0051707,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0071941,GO:0071944,GO:0072593,GO:1903409,GO:2001057 |
| Evalue | 5.32e-172 |
| EggNOG OGs | COG0543@1|root,COG2041@1|root,COG5274@1|root,KOG0534@2759|Eukaryota,KOG0535@2759|Eukaryota,KOG0537@2759|Eukaryota,37KGC@33090|Viridiplantae,3GEH9@35493|Streptophyta |
| EC | 1.7.1.1,1.7.1.2,1.7.1.3 |
| Description | Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria |
| COG category | C |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi12676.t1 ID=Gvermi12676.t1|Name=Gvermi12676.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=823bp MSNRESGLDSSSQKILCTSNNQHMIQVSEEESLNCQSNLYDLYGKGFITP NQSHFIRNHGKVPSLKWKEHELHVKGMVKNPTVFSMDELVSMPCVTLPVS ITSGSNRAKEFISENPTTALNWGAAATACSFWTGVRLNYLLKVCQVDFQR AKYVRFEASGSEELSNGSYSSSMDIASAIDPLSDIIIAYKQNGSHLRGES GFPIRAVTPGWIGARMVKWLSTIEVTETSTNNYYYNFENRVFPSFVRCKL ANAHQYWYQNQFVFNELNINSVIAHPFHKLALKVSSQKKYEIKGYAYSGN GRKITRVEVSFDQGQTWNICQLFFPEEEQSHAPQYGKYYCWMFWKYDVEV LTLVKAAKTYGELRCRAWDQSNNTQPKEKNWNMLGCGNNSHFVVKAMYVP GIRSQTEQKESRETDSYLKFLHPTVAGNDASGWMKNLKRIKETHSNPQDE ESSNIEQSQTTTGKSGQTEQDGEGHHERNPDICMIPVSNAISNTMRRKGN NYLSIQYIPGFSMFGGRIEDFVKNSKTSNSSLSQTSIKDLARPSNGKVVS RSSRQGRAAFRPLQALDPDAWLSFELIEKKNISYDTRILKFKLPSPNHYL GVPVGQHVLVRIIVNGNPLIRAYTPITSEKQLGFFTLCVKIYLAGADVKH PDGGKMSQFLECMLLGDSLSITGPHGQVHYKRNGIFNFNGKEKKYRNVAL LCGGTGITPAFQIMHEVYQNTSDKTNVYLLYANRTHYDVLLQADLDIMAE KRDNIHVWYTLERIPEVWMYSQGLITEPMIRERIPAPADDTLVLLCGPPK MIISCLLSLHNIGYQEEHVKTF* back to topspliced messenger RNA >Gvermi12676.t1 ID=Gvermi12676.t1|Name=Gvermi12676.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2469bp|location=Sequence derived from alignment at ScGOVlb_425:637962..640430+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTCCAACAGGGAATCTGGACTTGATTCATCCAGTCAGAAAATTTTATG TACCTCAAATAATCAGCATATGATCCAGGTTTCTGAAGAGGAATCCCTAA ATTGTCAATCGAATCTCTACGATCTTTACGGGAAAGGTTTCATCACTCCA AATCAGTCACATTTCATTCGAAATCATGGAAAAGTTCCTTCGCTGAAATG GAAAGAGCACGAACTCCATGTAAAGGGAATGGTCAAGAATCCAACTGTGT TTTCTATGGACGAACTTGTTTCCATGCCCTGCGTCACACTTCCGGTATCA ATCACATCTGGAAGTAATAGAGCAAAAGAATTTATCTCAGAAAACCCAAC AACTGCTCTTAACTGGGGTGCCGCTGCAACGGCATGTTCTTTTTGGACCG GTGTTCGTCTTAACTATCTTCTAAAAGTCTGCCAAGTAGATTTTCAACGA GCAAAATACGTGCGCTTCGAAGCCTCTGGCTCGGAGGAACTATCAAATGG TAGCTACAGTTCTTCCATGGACATTGCTTCTGCTATTGATCCATTGTCCG ATATTATCATTGCTTACAAACAAAACGGAAGCCATTTACGAGGCGAGTCT GGCTTTCCGATTCGTGCTGTAACCCCTGGCTGGATAGGAGCTCGAATGGT GAAGTGGTTGAGCACGATCGAAGTGACCGAAACATCTACAAATAATTATT ATTACAATTTCGAAAATCGAGTATTTCCCTCATTTGTACGTTGCAAACTT GCAAATGCCCATCAATACTGGTATCAGAATCAATTTGTCTTCAACGAATT GAATATTAATTCGGTTATAGCTCATCCGTTTCACAAACTTGCTCTAAAGG TCAGCAGTCAAAAGAAATACGAAATCAAGGGCTATGCCTACTCGGGAAAT GGAAGAAAAATAACAAGGGTGGAAGTGTCTTTTGATCAAGGCCAAACCTG GAATATTTGTCAGTTATTTTTTCCAGAAGAAGAGCAGAGCCATGCTCCGC AATACGGAAAATACTACTGCTGGATGTTTTGGAAGTATGATGTAGAGGTT TTGACGTTGGTGAAAGCAGCGAAAACATATGGGGAACTACGTTGCAGAGC ATGGGATCAATCCAACAACACGCAACCGAAAGAAAAAAATTGGAATATGC TTGGGTGCGGAAACAATTCCCATTTTGTTGTCAAGGCCATGTATGTTCCT GGAATCAGGTCTCAAACAGAACAGAAAGAATCAAGAGAGACGGACTCATA CCTTAAATTTCTCCATCCAACCGTTGCGGGAAACGATGCTAGTGGATGGA TGAAAAATTTAAAAAGGATCAAAGAAACTCATTCTAACCCACAGGACGAA GAGAGCAGCAATATTGAACAGAGCCAAACCACAACCGGTAAATCTGGACA AACAGAACAGGACGGTGAAGGTCATCATGAAAGAAATCCAGATATTTGCA TGATACCAGTCTCAAATGCTATCTCAAACACAATGAGAAGAAAGGGCAAT AATTATTTAAGTATTCAATATATTCCTGGTTTTAGCATGTTTGGAGGACG TATTGAAGACTTTGTGAAGAATTCGAAAACATCAAACTCGAGCCTATCTC AAACTTCTATAAAGGATCTTGCACGACCTTCAAACGGTAAGGTTGTGTCC AGGTCTTCTCGTCAAGGAAGAGCAGCATTTAGGCCACTCCAGGCATTGGA TCCAGATGCATGGTTAAGCTTCGAACTTATAGAGAAGAAAAATATATCAT ATGACACTCGAATTCTTAAATTCAAATTACCGTCTCCGAACCATTATCTT GGTGTACCCGTCGGGCAGCATGTTTTGGTCAGGATCATTGTCAACGGAAA CCCTTTGATCAGAGCGTACACACCAATCACGAGTGAAAAGCAATTGGGAT TTTTTACTCTGTGTGTGAAGATATATCTTGCAGGTGCAGATGTGAAACAT CCAGATGGTGGAAAAATGTCACAATTTCTAGAATGTATGCTACTTGGTGA CAGTTTGAGTATTACTGGCCCCCATGGACAAGTTCACTACAAGAGAAATG GAATATTTAACTTCAACGGAAAAGAAAAAAAGTACCGAAACGTAGCTCTA CTTTGCGGTGGAACCGGTATCACACCCGCCTTTCAGATAATGCACGAAGT GTACCAGAATACATCCGATAAGACAAATGTTTACCTTCTATACGCAAATC GTACTCATTATGATGTGCTTTTACAGGCGGATCTTGACATTATGGCTGAA AAACGAGATAACATTCATGTTTGGTACACACTGGAAAGGATTCCAGAAGT GTGGATGTATAGTCAAGGCTTAATTACTGAGCCGATGATTCGAGAACGAA TACCAGCTCCAGCAGACGACACATTAGTTCTCTTATGCGGTCCACCGAAA ATGATCATTTCTTGCCTGTTAAGTTTGCATAACATCGGCTACCAAGAGGA ACACGTTAAGACTTTTTGA back to topprotein sequence of Gvermi12676.t1 >Gvermi12676.t1 ID=Gvermi12676.t1|Name=Gvermi12676.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=823bp
MSNRESGLDSSSQKILCTSNNQHMIQVSEEESLNCQSNLYDLYGKGFITP NQSHFIRNHGKVPSLKWKEHELHVKGMVKNPTVFSMDELVSMPCVTLPVS ITSGSNRAKEFISENPTTALNWGAAATACSFWTGVRLNYLLKVCQVDFQR AKYVRFEASGSEELSNGSYSSSMDIASAIDPLSDIIIAYKQNGSHLRGES GFPIRAVTPGWIGARMVKWLSTIEVTETSTNNYYYNFENRVFPSFVRCKL ANAHQYWYQNQFVFNELNINSVIAHPFHKLALKVSSQKKYEIKGYAYSGN GRKITRVEVSFDQGQTWNICQLFFPEEEQSHAPQYGKYYCWMFWKYDVEV LTLVKAAKTYGELRCRAWDQSNNTQPKEKNWNMLGCGNNSHFVVKAMYVP GIRSQTEQKESRETDSYLKFLHPTVAGNDASGWMKNLKRIKETHSNPQDE ESSNIEQSQTTTGKSGQTEQDGEGHHERNPDICMIPVSNAISNTMRRKGN NYLSIQYIPGFSMFGGRIEDFVKNSKTSNSSLSQTSIKDLARPSNGKVVS RSSRQGRAAFRPLQALDPDAWLSFELIEKKNISYDTRILKFKLPSPNHYL GVPVGQHVLVRIIVNGNPLIRAYTPITSEKQLGFFTLCVKIYLAGADVKH PDGGKMSQFLECMLLGDSLSITGPHGQVHYKRNGIFNFNGKEKKYRNVAL LCGGTGITPAFQIMHEVYQNTSDKTNVYLLYANRTHYDVLLQADLDIMAE KRDNIHVWYTLERIPEVWMYSQGLITEPMIRERIPAPADDTLVLLCGPPK MIISCLLSLHNIGYQEEHVKTF* back to topmRNA from alignment at ScGOVlb_425:637962..640430+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi12676.t1 ID=Gvermi12676.t1|Name=Gvermi12676.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2469bp|location=Sequence derived from alignment at ScGOVlb_425:637962..640430+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTCCAACAGGGAATCTGGACTTGATTCATCCAGTCAGAAAATTTTATG
TACCTCAAATAATCAGCATATGATCCAGGTTTCTGAAGAGGAATCCCTAA
ATTGTCAATCGAATCTCTACGATCTTTACGGGAAAGGTTTCATCACTCCA
AATCAGTCACATTTCATTCGAAATCATGGAAAAGTTCCTTCGCTGAAATG
GAAAGAGCACGAACTCCATGTAAAGGGAATGGTCAAGAATCCAACTGTGT
TTTCTATGGACGAACTTGTTTCCATGCCCTGCGTCACACTTCCGGTATCA
ATCACATCTGGAAGTAATAGAGCAAAAGAATTTATCTCAGAAAACCCAAC
AACTGCTCTTAACTGGGGTGCCGCTGCAACGGCATGTTCTTTTTGGACCG
GTGTTCGTCTTAACTATCTTCTAAAAGTCTGCCAAGTAGATTTTCAACGA
GCAAAATACGTGCGCTTCGAAGCCTCTGGCTCGGAGGAACTATCAAATGG
TAGCTACAGTTCTTCCATGGACATTGCTTCTGCTATTGATCCATTGTCCG
ATATTATCATTGCTTACAAACAAAACGGAAGCCATTTACGAGGCGAGTCT
GGCTTTCCGATTCGTGCTGTAACCCCTGGCTGGATAGGAGCTCGAATGGT
GAAGTGGTTGAGCACGATCGAAGTGACCGAAACATCTACAAATAATTATT
ATTACAATTTCGAAAATCGAGTATTTCCCTCATTTGTACGTTGCAAACTT
GCAAATGCCCATCAATACTGGTATCAGAATCAATTTGTCTTCAACGAATT
GAATATTAATTCGGTTATAGCTCATCCGTTTCACAAACTTGCTCTAAAGG
TCAGCAGTCAAAAGAAATACGAAATCAAGGGCTATGCCTACTCGGGAAAT
GGAAGAAAAATAACAAGGGTGGAAGTGTCTTTTGATCAAGGCCAAACCTG
GAATATTTGTCAGTTATTTTTTCCAGAAGAAGAGCAGAGCCATGCTCCGC
AATACGGAAAATACTACTGCTGGATGTTTTGGAAGTATGATGTAGAGGTT
TTGACGTTGGTGAAAGCAGCGAAAACATATGGGGAACTACGTTGCAGAGC
ATGGGATCAATCCAACAACACGCAACCGAAAGAAAAAAATTGGAATATGC
TTGGGTGCGGAAACAATTCCCATTTTGTTGTCAAGGCCATGTATGTTCCT
GGAATCAGGTCTCAAACAGAACAGAAAGAATCAAGAGAGACGGACTCATA
CCTTAAATTTCTCCATCCAACCGTTGCGGGAAACGATGCTAGTGGATGGA
TGAAAAATTTAAAAAGGATCAAAGAAACTCATTCTAACCCACAGGACGAA
GAGAGCAGCAATATTGAACAGAGCCAAACCACAACCGGTAAATCTGGACA
AACAGAACAGGACGGTGAAGGTCATCATGAAAGAAATCCAGATATTTGCA
TGATACCAGTCTCAAATGCTATCTCAAACACAATGAGAAGAAAGGGCAAT
AATTATTTAAGTATTCAATATATTCCTGGTTTTAGCATGTTTGGAGGACG
TATTGAAGACTTTGTGAAGAATTCGAAAACATCAAACTCGAGCCTATCTC
AAACTTCTATAAAGGATCTTGCACGACCTTCAAACGGTAAGGTTGTGTCC
AGGTCTTCTCGTCAAGGAAGAGCAGCATTTAGGCCACTCCAGGCATTGGA
TCCAGATGCATGGTTAAGCTTCGAACTTATAGAGAAGAAAAATATATCAT
ATGACACTCGAATTCTTAAATTCAAATTACCGTCTCCGAACCATTATCTT
GGTGTACCCGTCGGGCAGCATGTTTTGGTCAGGATCATTGTCAACGGAAA
CCCTTTGATCAGAGCGTACACACCAATCACGAGTGAAAAGCAATTGGGAT
TTTTTACTCTGTGTGTGAAGATATATCTTGCAGGTGCAGATGTGAAACAT
CCAGATGGTGGAAAAATGTCACAATTTCTAGAATGTATGCTACTTGGTGA
CAGTTTGAGTATTACTGGCCCCCATGGACAAGTTCACTACAAGAGAAATG
GAATATTTAACTTCAACGGAAAAGAAAAAAAGTACCGAAACGTAGCTCTA
CTTTGCGGTGGAACCGGTATCACACCCGCCTTTCAGATAATGCACGAAGT
GTACCAGAATACATCCGATAAGACAAATGTTTACCTTCTATACGCAAATC
GTACTCATTATGATGTGCTTTTACAGGCGGATCTTGACATTATGGCTGAA
AAACGAGATAACATTCATGTTTGGTACACACTGGAAAGGATTCCAGAAGT
GTGGATGTATAGTCAAGGCTTAATTACTGAGCCGATGATTCGAGAACGAA
TACCAGCTCCAGCAGACGACACATTAGTTCTCTTATGCGGTCCACCGAAA
ATGATCATTTCTTGCCTGTTAAGTTTGCATAACATCGGCTACCAAGAGGA
ACACGTTAAGACTTTTTGA back to topCoding sequence (CDS) from alignment at ScGOVlb_425:637962..640430+ >Gvermi12676.t1 ID=Gvermi12676.t1|Name=Gvermi12676.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2469bp|location=Sequence derived from alignment at ScGOVlb_425:637962..640430+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTCCAACAGGGAATCTGGACTTGATTCATCCAGTCAGAAAATTTTATG TACCTCAAATAATCAGCATATGATCCAGGTTTCTGAAGAGGAATCCCTAA ATTGTCAATCGAATCTCTACGATCTTTACGGGAAAGGTTTCATCACTCCA AATCAGTCACATTTCATTCGAAATCATGGAAAAGTTCCTTCGCTGAAATG GAAAGAGCACGAACTCCATGTAAAGGGAATGGTCAAGAATCCAACTGTGT TTTCTATGGACGAACTTGTTTCCATGCCCTGCGTCACACTTCCGGTATCA ATCACATCTGGAAGTAATAGAGCAAAAGAATTTATCTCAGAAAACCCAAC AACTGCTCTTAACTGGGGTGCCGCTGCAACGGCATGTTCTTTTTGGACCG GTGTTCGTCTTAACTATCTTCTAAAAGTCTGCCAAGTAGATTTTCAACGA GCAAAATACGTGCGCTTCGAAGCCTCTGGCTCGGAGGAACTATCAAATGG TAGCTACAGTTCTTCCATGGACATTGCTTCTGCTATTGATCCATTGTCCG ATATTATCATTGCTTACAAACAAAACGGAAGCCATTTACGAGGCGAGTCT GGCTTTCCGATTCGTGCTGTAACCCCTGGCTGGATAGGAGCTCGAATGGT GAAGTGGTTGAGCACGATCGAAGTGACCGAAACATCTACAAATAATTATT ATTACAATTTCGAAAATCGAGTATTTCCCTCATTTGTACGTTGCAAACTT GCAAATGCCCATCAATACTGGTATCAGAATCAATTTGTCTTCAACGAATT GAATATTAATTCGGTTATAGCTCATCCGTTTCACAAACTTGCTCTAAAGG TCAGCAGTCAAAAGAAATACGAAATCAAGGGCTATGCCTACTCGGGAAAT GGAAGAAAAATAACAAGGGTGGAAGTGTCTTTTGATCAAGGCCAAACCTG GAATATTTGTCAGTTATTTTTTCCAGAAGAAGAGCAGAGCCATGCTCCGC AATACGGAAAATACTACTGCTGGATGTTTTGGAAGTATGATGTAGAGGTT TTGACGTTGGTGAAAGCAGCGAAAACATATGGGGAACTACGTTGCAGAGC ATGGGATCAATCCAACAACACGCAACCGAAAGAAAAAAATTGGAATATGC TTGGGTGCGGAAACAATTCCCATTTTGTTGTCAAGGCCATGTATGTTCCT GGAATCAGGTCTCAAACAGAACAGAAAGAATCAAGAGAGACGGACTCATA CCTTAAATTTCTCCATCCAACCGTTGCGGGAAACGATGCTAGTGGATGGA TGAAAAATTTAAAAAGGATCAAAGAAACTCATTCTAACCCACAGGACGAA GAGAGCAGCAATATTGAACAGAGCCAAACCACAACCGGTAAATCTGGACA AACAGAACAGGACGGTGAAGGTCATCATGAAAGAAATCCAGATATTTGCA TGATACCAGTCTCAAATGCTATCTCAAACACAATGAGAAGAAAGGGCAAT AATTATTTAAGTATTCAATATATTCCTGGTTTTAGCATGTTTGGAGGACG TATTGAAGACTTTGTGAAGAATTCGAAAACATCAAACTCGAGCCTATCTC AAACTTCTATAAAGGATCTTGCACGACCTTCAAACGGTAAGGTTGTGTCC AGGTCTTCTCGTCAAGGAAGAGCAGCATTTAGGCCACTCCAGGCATTGGA TCCAGATGCATGGTTAAGCTTCGAACTTATAGAGAAGAAAAATATATCAT ATGACACTCGAATTCTTAAATTCAAATTACCGTCTCCGAACCATTATCTT GGTGTACCCGTCGGGCAGCATGTTTTGGTCAGGATCATTGTCAACGGAAA CCCTTTGATCAGAGCGTACACACCAATCACGAGTGAAAAGCAATTGGGAT TTTTTACTCTGTGTGTGAAGATATATCTTGCAGGTGCAGATGTGAAACAT CCAGATGGTGGAAAAATGTCACAATTTCTAGAATGTATGCTACTTGGTGA CAGTTTGAGTATTACTGGCCCCCATGGACAAGTTCACTACAAGAGAAATG GAATATTTAACTTCAACGGAAAAGAAAAAAAGTACCGAAACGTAGCTCTA CTTTGCGGTGGAACCGGTATCACACCCGCCTTTCAGATAATGCACGAAGT GTACCAGAATACATCCGATAAGACAAATGTTTACCTTCTATACGCAAATC GTACTCATTATGATGTGCTTTTACAGGCGGATCTTGACATTATGGCTGAA AAACGAGATAACATTCATGTTTGGTACACACTGGAAAGGATTCCAGAAGT GTGGATGTATAGTCAAGGCTTAATTACTGAGCCGATGATTCGAGAACGAA TACCAGCTCCAGCAGACGACACATTAGTTCTCTTATGCGGTCCACCGAAA ATGATCATTTCTTGCCTGTTAAGTTTGCATAACATCGGCTACCAAGAGGA ACACGTTAAGACTTTTTGA back to top
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