Gvermi12773.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12773.t1
Unique NameGvermi12773.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length501
Homology
The following BLAST results are available for this feature:
BLAST of Gvermi12773.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 113..168
e-value: 6.2E-6
score: 27.8
NoneNo IPR availablePFAMPF13384HTH_23coord: 126..163
e-value: 2.7E-6
score: 27.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..125
IPR010921Trp repressor/replication initiatorSUPERFAMILY48295TrpR-likecoord: 126..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1474544..1476046 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12773.t1Gvermi12773.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1474544..1476046 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12773.t1 ID=Gvermi12773.t1|Name=Gvermi12773.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=501bp
MPDVSTTYAPQIPLSPLPSVALPKSASENKPIETDSLKPSEAELHKPADP
DTLKDHVSPQVAASPPIPGPQPASEPSTSTIAPSVVPPMPQTAAVDLQRD
AASTLPTVRSRSKNRPGRPPNINENSLMRRLECIMAVETSRMTMAEACTH
YDISPRTFYRWLRSKDRLIQLTGFTAEDFKNGPPPPERTALSDQIHRMPP
VNVADLRSNPPRISQPAIAAQAAAAAVARQPAPIAHKRRLPRVPLYSNVC
DDRGLRQSQMYHRNTTKMPSRTSAAADEQLSRLGNSTGLTRNKRPSMFSP
SNEMDVRDVNHMYHFSDPDEAPTTPNMGKRRRISRGDTVVLEETVEDDFE
ASVHPSRQFLSKGSAQVGANINGNVSHEQLLRQSSPEGTQTKVNLYPEAL
PAAASGIHEGFSRGMDLPQTHTSTQFIECSQKHKIEVVMGSKKVNLAWYH
GATSADIKEVIMRRFSLVSGTQWALVDKHHDEIIISDGIPNGRYHITVLP
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR010921Trp_repressor/repl_initiator