Gvermi12732.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12732.t1
Unique NameGvermi12732.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length514
Homology
BLAST of Gvermi12732.t1 vs. uniprot
Match: A0A2V3INE1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INE1_9FLOR)

HSP 1 Score: 333 bits (855), Expect = 2.450e-105
Identity = 186/448 (41.52%), Postives = 265/448 (59.15%), Query Frame = 0
Query:    1 MAIIAVDSRYVNALIYVVVDVAVFAILVMTLTSIQAWSIRRRLLNGERISLREHRISPLTGGVIEDGNRLSKLLVFVHFLLLALLFVFALGINGQTTKAKRPANRQYISKLDPLTARVLFDNSMHPQIISSCTEFSNEILTYYPIAFDKQNMSSAPVSELNLAESPYDEIGTAVDSASVLCQAHDRAKPLLKVSKCGTDWKSCCNLRISRPTRISLMTGKGSPKVWQRNEVHRNYSSLIMTRN-VRPVSYDMSATVYDRLICLDLYRFSSPESA---RMNCMLGTWTAGGTSFTFLLGKATFAQTKREQVMNTNKRTEVSFEAFSEEATIEWDAEAEIILSNGLHSISDNMVPVRLFLDTFVSRSSVPVNVTNEVIYEEFDMDVTDVKTFAIVGYSILIVLAILMLLFLLVNLSKSSVKEKDGPVIPDITSYGGLL----KLLQDEET 440
            M  + VDSR++NA IY++VDV +FA+L+  + S+Q W ++ R+  G  +S++E  +   +GGV+ DG  LS + V  H LL+A+LF   LG+NG++ KA RP  R+YIS+L P    ++ +  ++PQI++SC  F    L Y+ +AFD +             +   + +G AVDS SVLCQ ++ AKPLL+V KCG +  +CCNL I++P  + L  G G  + WQRN V   + S  + RN VR VS  +S   Y+RLICL     S P      R NCMLG W    ++F F LG  +     R  +M+T +  +V F A+S E  IEWDA  E +LSNGLHSI  NMVP RLFLDTFVSRSS  V + N  +YE++++ VTD+ T  +VGY +L +L    L+   + L     K+ D   IP++ +Y GLL    KLL   +T
Sbjct:    1 MVTLEVDSRFINAGIYIIVDVIIFAVLLSGIISLQTWYVKHRMFQGHDVSVQEFPLIAFSGGVVSDGTPLSFVFVGAHLLLMAILFSLTLGVNGRSDKAYRPTKREYISRLTPSDTPLVAEQRIYPQILASCNSFEKSQLMYFEVAFDSEENRMELTDGTAENQIGNESVGMAVDSESVLCQDYEEAKPLLRVLKCGVNRNACCNLYITQPQVLVLERGDGGEQDWQRNGVAVWFGSTALLRNSVRSVSSQVSTARYNRLICLSSQTGSLPSGELGMRTNCMLGVWNENKSAFRFRLGTISLTNKTRNSIMDTAEDRKVEFTAYSVEIEIEWDANEEKVLSNGLHSIGGNMVPARLFLDTFVSRSSQSVALGNTAVYEKYEVLVTDISTACLVGYGVLTILG---LIVGCLTLWMKCRKKSDTEAIPEVNTYQGLLLMLGKLLSQNQT 445          
BLAST of Gvermi12732.t1 vs. uniprot
Match: A0A2V3IKH5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKH5_9FLOR)

HSP 1 Score: 189 bits (480), Expect = 3.550e-50
Identity = 138/468 (29.49%), Postives = 228/468 (48.72%), Query Frame = 0
Query:    7 DSRYVNALIYVVVDVAVFAILVMTLTSIQAWSIRRRLLNGERISLREHRISPLTGGVIEDGNRLSKLLVFVHFLLLALLFVFALGINGQTTKAKRPANRQYISKL------DPLTARVLFDNSMHPQIISSCTEFSNEILT------YYPIAFDKQNMSSAPVSELNLAESPYDEIGTAVDSASVLCQAHDRAKPLLKVSKCGTDWKSCCNLRISRPTRISLMTGKGSPKVWQRNEVHRNYSSLIMTRNVRPVSYDMSATVYDRLICLDLYRFSSPESARM---NCMLGTWTAGGTSFTFLLGKAT--FAQTKREQVMNTNKRTEVSFEAFSEEATIEWDAEA--EIILSNGLHSISDNMVPVRLFLDTFVSRSSVPVNVTNEVIYEEFDMDVTDVKTFAIVGYSILIVLAILMLLFLLVNLSKSSVKEKDGPVIPDITSYGGLLKLLQDEETRKHDRHPKRPKVQFG 455
            DSR+VNA IY+VVDV    IL+  L +IQ+ S + RL  G+ I+L+   +S L GG ++D   L  +LV ++ LLL + F   LG++G T    RPA+R+Y+++L      DP+  R      ++P   S C +   + +       YYP AFD   +  A + +L         +  +VD  ++LCQ H   KPLL V +CG     C N+ ++    +S+          +   +   Y  L+    V        A+ Y+R+IC++  R  S ES  +   NC+LG W    T F F +GKA+  +    + ++ N      ++F A S E  + W+ E   E +    + ++  +++  R FLD  VSR+ V  +       +E  + +T++ T + VGY  +IVL++++L       +  +       +  DIT+Y GLL+LLQ    R   +   R +V+ G
Sbjct:    7 DSRFVNAAIYIVVDVTCSVILISELQAIQSISTKLRLRQGKSINLQHTNMSVLAGGALKDDTPLFSILVMLNLLLLGVFFFLTLGVSGTTKDVVRPASRRYVTRLAVTGDEDPVRTR------LNPTFFSGCVQSDGDGMENATSFRYYPTAFDV--IGDARIKDLYTFTDESSAV-VSVDVHNMLCQKHGNMKPLLLVKRCGKTKGQCSNMYVTEFIGLSVQNESS-----RFETIGSGYGLLVGYLTVTINVESRWASGYNRMICIERPRQGSVESPLLSFFNCVLGVWNKNMTEFRFRIGKASTLYKSLLQGEIQNPEISNSLTFRASSTEVVLGWNFEPNQEWVFRQAIIALGKDLIDARSFLDILVSRTLVAEDADGLQFLQEERIQITEITTVSFVGYVTVIVLSVILLFLKTCFRNSFAALLGVENICVDITTYNGLLELLQKAYIRWKQKELDRKEVKSG 460          
BLAST of Gvermi12732.t1 vs. uniprot
Match: A0A2V3IPL9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPL9_9FLOR)

HSP 1 Score: 168 bits (425), Expect = 9.050e-43
Identity = 140/472 (29.66%), Postives = 233/472 (49.36%), Query Frame = 0
Query:    1 MAIIAVDSRYVNALIYVVVDVAVFAILV-MTLTSIQAWSIRRRLLNGERISLREHRISPLTGGVIEDGNRLSKLLVFVHFLLLALLFVFALGINGQTTKAKRPANRQYISKLDPLTARVLFD-NS--MHPQIISSCTEFSNEI--LTYYPIAFDKQNMSSAPVSELNLAESPYDEIGTAVDSASVLCQAHDRAKPLLKVSKCGTDWKSCCNLRISRPTRISLMTGKGSPK-VWQRNEVHRNYSS-----LIMTRNVRPVSYDMSATVYDRLICLDL----YRFSSPESARMNCMLGTWTAGGTSFTFLLGKATFAQTKREQVMNTNKRTEVS-FEAFSEEATIEWD--AEAEIILSNGLHSISDNMVPVRLFLDTFVSRSSVPVNVT----NEVIYEEFDMDVTDVKTFAIVGYSILIVLAILMLLFLLVNLSKSSVKEKDGPVIPDITSYGGLLKLLQ----DEETRKHDR 445
            M  I ++S+YVNA+++++VD+  F I++  +L  +QA   RRRL  G R+ LRE R +    G+++DG R ++LL+  + LL+ ++F+  L ING+T   ++  +RQYI+ L    A   FD NS  +HP + S C E S     +TYYP AF+   + +  + +     +   E    +DS S  CQ+      LL + +CG D   C N+  S    + +++ K   +  WQ  +      S     ++   NV+P+   ++ T Y+RLICL       RFS   +    C+LGTW+     FTF +G A+ +  + E  +      +V+ F+  + EA + W      E  + N L  +S++ V  R FLD  V+R+ +   V+       ++E  +  VT ++     GY++ +   +  L F         V    G +  DITSY G+L+LL     +E+   H R
Sbjct:    1 MCTIPIESKYVNAVVFLIVDLLCFMIIIGSSLQKVQARYTRRRLQRGYRVHLRESRFAHFLPGILKDGLRRTRLLILSYLLLVLVVFLLTLTINGETEVMQKTISRQYITAL----AAAPFDYNSARLHPSVFSHCVETSTTTSSVTYYPTAFN--TIENQTIFDRMAFRNKQGE-PVPIDSESKQCQSFQNVPSLLTIPRCGKDMHECSNVEESDMFLLQILSKKNDIEDPWQSVKRLTTRGSGEDSLVLFHANVKPIRPVLATTPYNRLICLQRPLRGSRFSGA-AVWFTCVLGTWSQFADRFTFRVGVASVSFLRWEDSLRQKFIPDVTAFQIMTTEAVLPWSYTTGGEDAIVNALVPVSEDTVSARSFLDGLVARALIAQEVSATPYKGQLFEPIEQAVTKIQAVGAWGYAVFLFATVATLAFR----GWFLVTRPGGQL--DITSYSGMLQLLSYVSGNEDWGDHQR 458          
The following BLAST results are available for this feature:
BLAST of Gvermi12732.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3INE1_9FLOR2.450e-10541.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IKH5_9FLOR3.550e-5029.49Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IPL9_9FLOR9.050e-4329.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 386..407
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 13..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 408..513
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 93..385
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..72
NoneNo IPR availableTMHMMTMhelixcoord: 73..92
NoneNo IPR availableTMHMMTMhelixcoord: 385..407
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1259812..1261353 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12732.t1Gvermi12732.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1259812..1261353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12732.t1 ID=Gvermi12732.t1|Name=Gvermi12732.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=514bp
MAIIAVDSRYVNALIYVVVDVAVFAILVMTLTSIQAWSIRRRLLNGERIS
LREHRISPLTGGVIEDGNRLSKLLVFVHFLLLALLFVFALGINGQTTKAK
RPANRQYISKLDPLTARVLFDNSMHPQIISSCTEFSNEILTYYPIAFDKQ
NMSSAPVSELNLAESPYDEIGTAVDSASVLCQAHDRAKPLLKVSKCGTDW
KSCCNLRISRPTRISLMTGKGSPKVWQRNEVHRNYSSLIMTRNVRPVSYD
MSATVYDRLICLDLYRFSSPESARMNCMLGTWTAGGTSFTFLLGKATFAQ
TKREQVMNTNKRTEVSFEAFSEEATIEWDAEAEIILSNGLHSISDNMVPV
RLFLDTFVSRSSVPVNVTNEVIYEEFDMDVTDVKTFAIVGYSILIVLAIL
MLLFLLVNLSKSSVKEKDGPVIPDITSYGGLLKLLQDEETRKHDRHPKRP
KVQFGITSAGTIFSIGPVSDNMKTARLPTDGLLRWHRSSTDLTDLTKNTN
DDETLSNCSDMQQ*
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