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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7G3R1 |
| PFAMs | Carbam_trans_C,Carbam_trans_N |
| Max annot lvl | 2759|Eukaryota |
| Evalue | 1.02e-150 |
| EggNOG OGs | COG2192@1|root,2RKTV@2759|Eukaryota |
| Description | Carbamoyltransferase C-terminus |
| COG category | O |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi12816.t1 ID=Gvermi12816.t1|Name=Gvermi12816.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=767bp MTSGELFDLQVANISLLVYQFMAAFVSFAPFSLSAPDIVRVQRVHRIRTK CAASLVIGINQYSHDASVAIIEADSGKLLFAQSKERLTRRKHDGGDVSEL VYHAIESIASEEETASEVASKIQLVVANNHHFRILPFESRIPFQTSLGYI PISYRSPWNLIGSQAPYIKDFERNAPRASKIELSHHLAHAYSAVYGSPFS RGVVIVMDGMGDARDDWLVARARNDPSHISELSYPEFVQNDPDFREYPKD VDDRPGVSFREAETAYIFEKCQHGVRFSRIFKRWTPENAPPELPNHSFEE MDSIGAMYSRISALIFKDWNNCGKVMGLAPYGQAQSKLSVEERYFITGSL YDGSIDLEPGKKKGLEHLEKSIADADDTLKGTELRNYFRRIAYYIQHDLE QIAIDFVLKLLSDTGESNLVLAGGVALNSTMNGIISSSPGVKGFYVPPYP GDEGIAIGCAFFGFSYISRSLGRCLQYLPKIFMPYLGRKYSPKDFEHAIE CYSPWIRKKRGNCVKEAAVALAKGKTVAWFNGRSEFGPRALGNRSLLADP RDKNMVTHLNDVVKKRESFRPFAPSVLVEHASHWFWKCNTEASPFMSLTK RAKMRDLIPAVVHVDGTSRLQTVTREHNPVYYALISHFFDMTKIPMVLNT SFNTAGEPIVESPTDAINTFLRSDGIDLLIFPNHILTKRNDIALSLEHEI SSACSGFRSKQIQNIRGENLRTSIFLQGRIFETDGEAFSSHRDEEEVELI DSQQLGILEIVHELGI* back to topspliced messenger RNA >Gvermi12816.t1 ID=Gvermi12816.t1|Name=Gvermi12816.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2301bp|location=Sequence derived from alignment at ScGOVlb_425:1677466..1679923+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGACCTCCGGAGAGCTGTTTGATCTGCAGGTAGCCAATATTAGCCTTCT CGTATACCAGTTCATGGCTGCTTTCGTGAGCTTTGCGCCGTTCTCTTTAT CAGCTCCTGATATAGTAAGGGTTCAAAGGGTTCATCGGATCCGTACGAAG TGTGCGGCGTCTCTTGTCATCGGCATAAATCAGTATTCCCATGATGCATC TGTGGCCATAATCGAGGCAGATTCAGGCAAGCTTCTATTTGCACAGAGCA AAGAGCGCCTGACCCGACGTAAACATGACGGTGGAGACGTTTCTGAATTG GTCTATCATGCAATTGAGTCAATAGCGTCTGAAGAGGAAACGGCATCTGA AGTTGCATCCAAAATTCAACTCGTTGTCGCAAACAACCATCACTTTCGGA TTCTGCCTTTCGAGTCCCGCATACCTTTCCAAACATCATTAGGGTATATT CCTATCTCCTACCGATCACCTTGGAATCTTATAGGCTCCCAGGCACCATA TATAAAAGACTTTGAACGAAATGCACCGAGAGCCAGCAAAATCGAGCTAT CTCACCATCTTGCTCATGCTTATTCTGCTGTGTATGGCTCTCCTTTCTCT CGAGGAGTTGTAATTGTAATGGATGGTATGGGTGATGCAAGGGATGACTG GCTCGTTGCCCGCGCCCGGAACGACCCATCTCACATCTCTGAACTTTCAT ATCCCGAATTTGTACAAAATGATCCTGATTTTAGGGAGTATCCCAAAGAT GTTGATGATCGGCCCGGGGTATCATTCAGAGAAGCAGAGACAGCGTATAT CTTTGAAAAATGTCAGCATGGTGTTCGTTTCTCTCGAATATTCAAGCGGT GGACTCCTGAGAACGCCCCCCCTGAACTACCTAATCATTCTTTTGAAGAA ATGGATAGTATCGGAGCAATGTATAGTCGCATATCGGCTTTAATTTTCAA GGACTGGAACAACTGCGGAAAGGTGATGGGTTTAGCCCCTTATGGACAAG CTCAATCAAAACTTTCTGTGGAAGAAAGATATTTCATAACTGGTTCTCTT TATGATGGGAGTATCGATTTAGAACCTGGAAAAAAGAAAGGGCTTGAGCA CCTTGAGAAAAGCATTGCTGACGCCGACGATACTTTGAAAGGGACAGAAC TCCGCAATTATTTCCGCCGAATTGCATATTATATACAACACGATTTGGAG CAAATCGCGATTGACTTCGTTTTAAAATTGTTATCCGATACTGGCGAGAG CAACCTCGTTCTTGCTGGTGGCGTTGCTTTAAACAGCACCATGAATGGTA TAATAAGCTCAAGCCCAGGTGTGAAAGGATTCTATGTCCCACCGTATCCC GGCGATGAAGGGATTGCCATCGGTTGTGCGTTTTTTGGGTTTTCTTACAT TTCCCGTTCTCTAGGGCGATGTCTGCAATACCTCCCAAAGATTTTCATGC CCTACTTGGGGAGGAAGTATTCACCAAAAGATTTTGAGCACGCCATAGAG TGCTATAGCCCATGGATTCGAAAAAAACGAGGCAACTGTGTGAAAGAAGC TGCTGTGGCGCTGGCCAAGGGGAAGACAGTAGCTTGGTTCAACGGAAGAA GCGAGTTTGGTCCGAGGGCTTTGGGAAACCGTTCGCTTCTTGCAGATCCA CGTGACAAAAACATGGTAACCCATCTTAACGATGTTGTGAAGAAACGAGA GTCATTTCGACCTTTTGCTCCCTCCGTATTGGTAGAGCATGCCTCGCACT GGTTTTGGAAGTGCAATACCGAAGCATCTCCATTTATGTCATTAACAAAG AGGGCAAAAATGCGTGATTTGATACCAGCCGTTGTTCACGTAGATGGAAC TTCTCGCTTGCAGACAGTAACTCGAGAGCATAATCCAGTGTATTATGCCC TAATCAGCCACTTTTTCGACATGACAAAGATACCGATGGTGCTGAATACT TCCTTTAATACGGCAGGAGAACCAATCGTGGAGTCACCCACTGATGCCAT CAATACCTTTCTCAGAAGTGATGGTATTGACTTGCTCATTTTTCCGAACC ATATACTTACAAAGAGAAACGATATTGCACTCTCACTTGAGCACGAAATA TCTTCTGCGTGTTCTGGGTTTCGGTCCAAGCAGATTCAAAACATCCGTGG TGAAAATTTACGAACAAGCATTTTTCTACAGGGCAGAATTTTTGAAACCG ATGGCGAGGCATTTAGTTCTCACCGGGACGAAGAAGAAGTAGAGCTAATT GATAGCCAGCAGCTTGGAATTCTAGAAATCGTTCACGAGCTTGGAATCTG A back to topprotein sequence of Gvermi12816.t1 >Gvermi12816.t1 ID=Gvermi12816.t1|Name=Gvermi12816.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=767bp
MTSGELFDLQVANISLLVYQFMAAFVSFAPFSLSAPDIVRVQRVHRIRTK CAASLVIGINQYSHDASVAIIEADSGKLLFAQSKERLTRRKHDGGDVSEL VYHAIESIASEEETASEVASKIQLVVANNHHFRILPFESRIPFQTSLGYI PISYRSPWNLIGSQAPYIKDFERNAPRASKIELSHHLAHAYSAVYGSPFS RGVVIVMDGMGDARDDWLVARARNDPSHISELSYPEFVQNDPDFREYPKD VDDRPGVSFREAETAYIFEKCQHGVRFSRIFKRWTPENAPPELPNHSFEE MDSIGAMYSRISALIFKDWNNCGKVMGLAPYGQAQSKLSVEERYFITGSL YDGSIDLEPGKKKGLEHLEKSIADADDTLKGTELRNYFRRIAYYIQHDLE QIAIDFVLKLLSDTGESNLVLAGGVALNSTMNGIISSSPGVKGFYVPPYP GDEGIAIGCAFFGFSYISRSLGRCLQYLPKIFMPYLGRKYSPKDFEHAIE CYSPWIRKKRGNCVKEAAVALAKGKTVAWFNGRSEFGPRALGNRSLLADP RDKNMVTHLNDVVKKRESFRPFAPSVLVEHASHWFWKCNTEASPFMSLTK RAKMRDLIPAVVHVDGTSRLQTVTREHNPVYYALISHFFDMTKIPMVLNT SFNTAGEPIVESPTDAINTFLRSDGIDLLIFPNHILTKRNDIALSLEHEI SSACSGFRSKQIQNIRGENLRTSIFLQGRIFETDGEAFSSHRDEEEVELI DSQQLGILEIVHELGI* back to topmRNA from alignment at ScGOVlb_425:1677466..1679923+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi12816.t1 ID=Gvermi12816.t1|Name=Gvermi12816.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2458bp|location=Sequence derived from alignment at ScGOVlb_425:1677466..1679923+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGACCTCCGGAGAGCTGTTTGATCTGCAGGTAGCCAATATTAGCCTTCT
CGTATACCAGTTCATGGCTGCTTTCGTGAGCTTTGCGCCGTTCTCTTTAT
CAGCTCCTGATATAGTAAGGGTTCAAAGGGTTCATCGGATCCGTACGAAG
TGTGCGGCGTCTCTTGTCATCGGCATAAATCAGTATTCCCATGATGCATC
TGTGGCCATAATCGAGGCAGATTCAGGCAAGCTTCTATTTGCACAGAGCA
AAGAGCGCCTGACCCGACGTAAACATGACGGTGGAGACGTTTCTGAATTG
GTCTATCATGCAATTGAGTCAATAGCGTCTGAAGAGGAAACGGCATCTGA
AGTTGCATCCAAAATTCAACTCGTTGTCGCAAACAACCATCACTTTCGGA
TTCTGCCTTTCGAGTCCCGCATACCTTTCCAAACATCATTAGGGTATATT
CCTATCTCCTACCGATCACCTTGGAATCTTATAGGCTCCCAGGCACCATA
TATAAAAGACTTTGAACGAAATGCACCGAGAGCCAGCAAAATCGAGCTAT
CTCACCATCTTGCTCATGCTTATTCTGCTGTGTATGGCTCTCCTTTCTCT
CGAGGAGTTGTAATTGTAATGGATGGTATGGGTGATGCAAGGGATGACTG
GCTCGTTGCCCGCGCCCGGAACGACCCATCTCACATCTCTGAACTTTCAT
ATCCCGAATTTGTACAAAATGATCCTGATTTTAGGGAGTATCCCAAAGAT
GTTGATGATCGGCCCGGGGTATCATTCAGAGAAGCAGAGACAGCGTATAT
CTTTGAAAAATGTCAGCATGGTGTTCGTTTCTCTCGAATATTCAAGCGGT
GGACTCCTGAGAACGCCCCCCCTGAACTACCTAATCATTCTTTTGAAGAA
ATGGATAGTATCGGAGCAATGTATAGTCGCATATCGGCTTTAATTTTCAA
GGACTGGAACAACTGCGGAAAGGTAAGTGTTGTTCTAGATGCGCTAAATT
TTTGAAGGCAAAAGCAGGAGGGGCTCATGAAGTAAGGTCTTTCTGACATA
AAGCTCTTTGTTCCTGCAAGGTGATGGGTTTAGCCCCTTATGGACAAGCT
CAATCAAAACTTTCTGTGGAAGAAAGATATTTCATAACTGGTTCTCTTTA
TGATGGGAGTATCGATTTAGAACCTGGAAAAAAGAAAGGGCTTGAGCACC
TTGAGAAAAGCATTGCTGACGCCGACGATACTTTGAAAGGGACAGAACTC
CGCAATTATTTCCGCCGAATTGCATATTATATACAACACGATTTGGAGCA
AATCGCGATTGACTTCGTTTTAAAATTGTTATCCGATACTGGCGAGAGCA
ACCTCGTTCTTGCTGGTGGCGTTGCTTTAAACAGCACCATGAATGGTATA
ATAAGCTCAAGCCCAGGTGTGAAAGGATTCTATGTCCCACCGTATCCCGG
CGATGAAGGGATTGCCATCGGTTGTGCGTTTTTTGGGTTTTCTTACATTT
CCCGTTCTCTAGGGCGATGTCTGCAATACCTCCCAAAGATTTTCATGCCC
TACTTGGGGAGGAAGTATTCACCAAAAGATTTTGAGCACGCCATAGAGTG
CTATAGCCCATGGATTCGAAAAAAACGAGGCAACTGTGTGAAAGAAGCTG
CTGTGGCGCTGGCCAAGGGGAAGACAGTAGCTTGGTTCAACGGAAGAAGC
GAGTTTGGTCCGAGGGCTTTGGGAAACCGTTCGCTTCTTGCAGATCCACG
TGACAAAAACATGGTAACCCATCTTAACGATGTTGTGAAGAAACGAGAGT
CATTTCGACCTTTTGCTCCCTCCGTATTGGTAGAGCATGCCTCGCACTGG
TTTTGGAAGTGCAATACCGAAGCATCTCCATTTATGTCATTAACAAAGAG
GGCAAAAATGCGTGATTTGATACCAGCCGTTGTTCACGTAGATGGAACTT
CTCGCTTGCAGACAGTAACTCGAGAGCATAATCCAGTGTATTATGCCCTA
ATCAGCCACTTTTTCGACATGACAAAGATACCGATGGTGCTGAATACTTC
CTTTAATACGGCAGGAGAACCAATCGTGGAGTCACCCACTGATGCCATCA
ATACCTTTCTCAGAAGTGATGGTATTGACTTGCTCATTTTTCCGAACCAT
ATACTTACAAAGAGAAACGATATTGCACTCTCACTTGAGCACGAAATATC
TTCTGCGTGTTCTGGGTTTCGGTCCAAGCAGATTCAAAACATCCGTGGTG
AAAATTTACGAACAAGCATTTTTCTACAGGGCAGAATTTTTGAAACCGAT
GGCGAGGCATTTAGTTCTCACCGGGACGAAGAAGAAGTAGAGCTAATTGA
TAGCCAGCAGCTTGGAATTCTAGAAATCGTTCACGAGCTTGGTACATGCA
AAATCTCTGATATTCTCCGCGAAATTAGTCAATCCTTCCCAGAAATACAG
GAATCTGA back to topCoding sequence (CDS) from alignment at ScGOVlb_425:1677466..1679923+ >Gvermi12816.t1 ID=Gvermi12816.t1|Name=Gvermi12816.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2301bp|location=Sequence derived from alignment at ScGOVlb_425:1677466..1679923+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGACCTCCGGAGAGCTGTTTGATCTGCAGGTAGCCAATATTAGCCTTCT CGTATACCAGTTCATGGCTGCTTTCGTGAGCTTTGCGCCGTTCTCTTTAT CAGCTCCTGATATAGTAAGGGTTCAAAGGGTTCATCGGATCCGTACGAAG TGTGCGGCGTCTCTTGTCATCGGCATAAATCAGTATTCCCATGATGCATC TGTGGCCATAATCGAGGCAGATTCAGGCAAGCTTCTATTTGCACAGAGCA AAGAGCGCCTGACCCGACGTAAACATGACGGTGGAGACGTTTCTGAATTG GTCTATCATGCAATTGAGTCAATAGCGTCTGAAGAGGAAACGGCATCTGA AGTTGCATCCAAAATTCAACTCGTTGTCGCAAACAACCATCACTTTCGGA TTCTGCCTTTCGAGTCCCGCATACCTTTCCAAACATCATTAGGGTATATT CCTATCTCCTACCGATCACCTTGGAATCTTATAGGCTCCCAGGCACCATA TATAAAAGACTTTGAACGAAATGCACCGAGAGCCAGCAAAATCGAGCTAT CTCACCATCTTGCTCATGCTTATTCTGCTGTGTATGGCTCTCCTTTCTCT CGAGGAGTTGTAATTGTAATGGATGGTATGGGTGATGCAAGGGATGACTG GCTCGTTGCCCGCGCCCGGAACGACCCATCTCACATCTCTGAACTTTCAT ATCCCGAATTTGTACAAAATGATCCTGATTTTAGGGAGTATCCCAAAGAT GTTGATGATCGGCCCGGGGTATCATTCAGAGAAGCAGAGACAGCGTATAT CTTTGAAAAATGTCAGCATGGTGTTCGTTTCTCTCGAATATTCAAGCGGT GGACTCCTGAGAACGCCCCCCCTGAACTACCTAATCATTCTTTTGAAGAA ATGGATAGTATCGGAGCAATGTATAGTCGCATATCGGCTTTAATTTTCAA GGACTGGAACAACTGCGGAAAGGTGATGGGTTTAGCCCCTTATGGACAAG CTCAATCAAAACTTTCTGTGGAAGAAAGATATTTCATAACTGGTTCTCTT TATGATGGGAGTATCGATTTAGAACCTGGAAAAAAGAAAGGGCTTGAGCA CCTTGAGAAAAGCATTGCTGACGCCGACGATACTTTGAAAGGGACAGAAC TCCGCAATTATTTCCGCCGAATTGCATATTATATACAACACGATTTGGAG CAAATCGCGATTGACTTCGTTTTAAAATTGTTATCCGATACTGGCGAGAG CAACCTCGTTCTTGCTGGTGGCGTTGCTTTAAACAGCACCATGAATGGTA TAATAAGCTCAAGCCCAGGTGTGAAAGGATTCTATGTCCCACCGTATCCC GGCGATGAAGGGATTGCCATCGGTTGTGCGTTTTTTGGGTTTTCTTACAT TTCCCGTTCTCTAGGGCGATGTCTGCAATACCTCCCAAAGATTTTCATGC CCTACTTGGGGAGGAAGTATTCACCAAAAGATTTTGAGCACGCCATAGAG TGCTATAGCCCATGGATTCGAAAAAAACGAGGCAACTGTGTGAAAGAAGC TGCTGTGGCGCTGGCCAAGGGGAAGACAGTAGCTTGGTTCAACGGAAGAA GCGAGTTTGGTCCGAGGGCTTTGGGAAACCGTTCGCTTCTTGCAGATCCA CGTGACAAAAACATGGTAACCCATCTTAACGATGTTGTGAAGAAACGAGA GTCATTTCGACCTTTTGCTCCCTCCGTATTGGTAGAGCATGCCTCGCACT GGTTTTGGAAGTGCAATACCGAAGCATCTCCATTTATGTCATTAACAAAG AGGGCAAAAATGCGTGATTTGATACCAGCCGTTGTTCACGTAGATGGAAC TTCTCGCTTGCAGACAGTAACTCGAGAGCATAATCCAGTGTATTATGCCC TAATCAGCCACTTTTTCGACATGACAAAGATACCGATGGTGCTGAATACT TCCTTTAATACGGCAGGAGAACCAATCGTGGAGTCACCCACTGATGCCAT CAATACCTTTCTCAGAAGTGATGGTATTGACTTGCTCATTTTTCCGAACC ATATACTTACAAAGAGAAACGATATTGCACTCTCACTTGAGCACGAAATA TCTTCTGCGTGTTCTGGGTTTCGGTCCAAGCAGATTCAAAACATCCGTGG TGAAAATTTACGAACAAGCATTTTTCTACAGGGCAGAATTTTTGAAACCG ATGGCGAGGCATTTAGTTCTCACCGGGACGAAGAAGAAGTAGAGCTAATT GATAGCCAGCAGCTTGGAATTCTAGAAATCGTTCACGAGCTTGGAATCTG A back to top
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