Gvermi12869.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12869.t1
Unique NameGvermi12869.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length298
Homology
BLAST of Gvermi12869.t1 vs. uniprot
Match: A0A2V3IGS9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGS9_9FLOR)

HSP 1 Score: 258 bits (660), Expect = 1.020e-82
Identity = 155/250 (62.00%), Postives = 183/250 (73.20%), Query Frame = 0
Query:    8 SQISSRNSEIQAQSNVFSSNNQKQTQHKTSRNQGALVARQAKRQKRFRFTDPYDLFLLRAVLKEDAHLSKWGELEATYRKVLEAFAKHIPSTAFLHMNRPSTKTLIDRVNRLISMRRAAIKKNVAVSGTTEEFGEKESLLDDLILQIDEKAETIGDTKEERNENEQKLVRAGECIRQKAHKSASKTDESDSHESLQSKKRPKKRRKRSPVAGSDDAFKTFLFEQAKEKQRLDAERVKLERERLEIQQKES 257
            S+ +S+++E+QAQSN  SS  Q  T  KT  +QG L      R KRF FTD YDLFL  AV KEDAH+ KW +LE TY  VL+AF KH+P TAF++MN   TKTLIDRV RLISMRRAA KK +A SG T+EF EKESLLDDLIL+IDE+AE     +E ++ENEQ L +A E I QKA K ASKTDE D+ E LQSK RPKKR KR  ++ SDDA   FL EQA+E QRLDAERVKLERERL++Q+K S
Sbjct:    4 SRSASQSAEVQAQSNDSSSKAQHDTXXKTKPSQGQLTTAPGTRPKRFHFTDAYDLFLTCAVRKEDAHIPKWADLEPTYEGVLKAFLKHVPPTAFMYMNHLLTKTLIDRVMRLISMRRAANKKTLAASGITKEFVEKESLLDDLILEIDEEAEATRVLRERKSENEQSLTKAEEFIWQKALKLASKTDERDNKERLQSKVRPKKRTKREQLSRSDDAIGNFLIEQARESQRLDAERVKLERERLDVQRKGS 253          
BLAST of Gvermi12869.t1 vs. uniprot
Match: A0A2V3ITU0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITU0_9FLOR)

HSP 1 Score: 174 bits (440), Expect = 2.700e-50
Identity = 91/147 (61.90%), Postives = 115/147 (78.23%), Query Frame = 0
Query:   52 KRFRFTDPYDLFLLRAVLKEDAHLSKWGELEATYRKVLEAFAKHIPSTAFLHMNRPSTKTLIDRVNRLISMRRAAIKKNVAVSGTTEEFGEKESLLDDLILQIDEKAETIGDTKEERNENEQKLVRAGECIRQKAHKSASKTDESDS 198
            KRFR  + +DLFLLRAV K+DAH+ KWGELE+ Y +VLE F K +PST F++MNRPSTKTLIDR  RL+SMRRA   +++A SG  E +GEKESLLDDLIL++D++AE     KEE+N  EQ+L+RAGE IR++A K +S TD SDS
Sbjct:   48 KRFRVPETFDLFLLRAVRKKDAHIPKWGELESFYERVLETFLKRVPSTVFIYMNRPSTKTLIDRFKRLVSMRRADNTRSMASSGIAETYGEKESLLDDLILEMDDRAEATRLIKEEQNMKEQRLIRAGESIRERALKRSSITDRSDS 194          
BLAST of Gvermi12869.t1 vs. uniprot
Match: A0A2V3ICE3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICE3_9FLOR)

HSP 1 Score: 149 bits (377), Expect = 4.080e-41
Identity = 77/127 (60.63%), Postives = 98/127 (77.17%), Query Frame = 0
Query:   52 KRFRFTDPYDLFLLRAVLKEDAHLSKWGELEATYRKVLEAFAKHIPSTAFLHMNRPSTKTLIDRVNRLISMRRAAIKKNVAVSGTTEEFGEKESLLDDLILQIDEKAETIGDTKEERNENEQKLVRA 178
            KRFRFT+ +DLFLLRAV KED H+ KWGELE+    VLE F K +PST F++MN PSTKTLIDR  RL+SMR+A   +++A SG  + + EKESLLDDLIL++DE+AE     KEE+N NE++L+RA
Sbjct:   48 KRFRFTETFDLFLLRAVRKEDPHIPKWGELESVSEIVLETFLKRVPSTVFIYMNHPSTKTLIDRFKRLVSMRKADNTRSMASSGIAKTYLEKESLLDDLILEMDERAEATRLMKEEQNMNEKRLIRA 174          
BLAST of Gvermi12869.t1 vs. uniprot
Match: A0A2V3IKT4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKT4_9FLOR)

HSP 1 Score: 129 bits (323), Expect = 1.610e-32
Identity = 100/167 (59.88%), Postives = 126/167 (75.45%), Query Frame = 0
Query:  131 VAVSGTTEEFGEKESLLDDLILQIDEKAETIGDTKEERNENEQKLVRAGECIRQKAHKSASKTDESDSHESLQSKKRPKKRRKRSPVAGSDDAFKTFLFEQAKEKQRLDAERVKLERERLEIQQKESLRXXXXXXXXXXXXXXXXXXXXXERSKLLRIMDHLSRKLQ 297
            +A SG  E +GEK+SLLDDLIL++DE+AE     KEE+N NEQ+L+R GE IR++A K +S TD  DS  S +S    KKR ++S  +  DDA  TFL +QA+E+QRLDA+RVK+ER++ E+QQKES  XXXXXXXXXXXXXXXXXXX  ER+K+L  MD L RKLQ
Sbjct:    1 MASSGIAETYGEKQSLLDDLILEMDERAEATRVLKEEQNMNEQRLIRVGESIRERALKRSSITDRIDSTRSQESMVPAKKRMRKSKPSTPDDAISTFLSKQAQEQQRLDADRVKIERDKFELQQKESXXXXXXXXXXXXXXXXXXXXXMEERNKVLNTMDMLGRKLQ 167          
BLAST of Gvermi12869.t1 vs. uniprot
Match: A0A2V3J6P0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6P0_9FLOR)

HSP 1 Score: 105 bits (263), Expect = 6.780e-23
Identity = 76/209 (36.36%), Postives = 110/209 (52.63%), Query Frame = 0
Query:   50 RQKRFRFTDPYDLFLLRAVLKEDAHLSKWGELEATYRKVLEAFAKHIPSTAFLHMNRPSTKTLIDRVNRLISMRRAAIKKNVAVSGTTEEFGEKESLLDDLILQIDEKAETIGDTKEERNENEQKLVRAGECIRQKA----HKSASKTDESDSHESLQSKKRP---KKRRKRSPVAGSDDAFKTFLFEQAKEKQRLDAERVKLERERLE 251
            ++KR RFT+ +DL LL+AV   DAH+   GE    + + L+ F    PS+  +H+ RP  KTL D    ++  RR  ++   + SG  ++  ++E  LDD+IL +DE+ E       ER E E++L+ A E IR K     HK   +  E D   S   K  P   KK RK      SDD  K  + E+ K ++ LD +R+KLE  RLE
Sbjct:   44 KKKRIRFTEAWDLLLLKAVTASDAHVVPHGETGKRFEQALKLFLDGAPSSQLVHITRPGPKTLRDHFTTIVEKRRVEVRGTASASGIVDKCVQREECLDDVILAMDEEQERKNALINERTEKEKQLIDAEEAIRAKPVTRMHKQKREDREEDCGASDGDKSTPVASKKVRKCVFSTDSDDDEKDAIQEEIKRRKELDVKRLKLEELRLE 252          
BLAST of Gvermi12869.t1 vs. uniprot
Match: A0A2V3IK68_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK68_9FLOR)

HSP 1 Score: 101 bits (251), Expect = 1.320e-21
Identity = 72/191 (37.70%), Postives = 100/191 (52.36%), Query Frame = 0
Query:   50 RQKRFRFTDPYDLFLLRAVLKEDAHLSKWGELEATYRKVLEAFAKHIPSTAFLHMNRPSTKTLIDRVNRLISMRRAAIKKNVAVSGTTEEFGEKESLLDDLILQIDEKAETIGDTKEERNENEQKLVRAGECIRQKAHKSASKTDESDSHE----SLQSKKRP---KKRRKRSPVAGSDDAFKTFLFEQAK 233
            ++KR RFT+ +DL LL+AV   DAH++  G+    + + L+ F    PS+  + + RP  KTL DR   ++  RR  ++   A SG  E+ G++E LLDD+IL +DE+ E       ER E E++L  AGE IR KA     K    D  E    S   K  P   KK RKR     SDD  K  + E+ K
Sbjct:   73 KKKRIRFTEAWDLLLLKAVTASDAHVAPHGKTGKRFEQALKLFLDAAPSSQLVDITRPVPKTLRDRFTTIVEKRRVEVRGTAAASGIVEKRGQREELLDDVILAMDEEQERKNALINERTEKEKQLNDAGEAIRAKAVTRMQKQQREDREEDCGASDSDKSSPVAFKKVRKRVFSTDSDDDEKDAIQEEIK 263          
BLAST of Gvermi12869.t1 vs. uniprot
Match: A0A2V3J565_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J565_9FLOR)

HSP 1 Score: 93.6 bits (231), Expect = 6.000e-20
Identity = 80/144 (55.56%), Postives = 98/144 (68.06%), Query Frame = 0
Query:  154 IDEKAETIGDTKEERNENEQKLVRAGECIRQKAHKSASKTDESDSHESLQSKKRPKKRRKRSPVAGSDDAFKTFLFEQAKEKQRLDAERVKLERERLEIQQKESLRXXXXXXXXXXXXXXXXXXXXXERSKLLRIMDHLSRKLQ 297
            +DEK+E     KE++N NEQ+L+RAGE IR++A K  S TD  D+ +S +SK   KK RK S    SDDA  TFL EQA+  QRLDA+ + +ERE+ E+QQKESL XXXXXXXXXXXXX        ER+K L IMD L  KLQ
Sbjct:    1 MDEKSEVTRLLKEKQNMNEQRLLRAGESIRERALKRLSITDRIDNTKSQESKVPAKKMRK-SKATTSDDAISTFLIEQAEGPQRLDADGMNIEREKFELQQKESLXXXXXXXXXXXXXXCERMQAKEERNKFLNIMDMLGWKLQ 143          
BLAST of Gvermi12869.t1 vs. uniprot
Match: A0A2V3INH1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INH1_9FLOR)

HSP 1 Score: 92.0 bits (227), Expect = 6.710e-19
Identity = 51/137 (37.23%), Postives = 79/137 (57.66%), Query Frame = 0
Query:   50 RQKRFRFTDPYDLFLLRAVLKEDAHLSKWGELEATYRKVLEAFAKHIPSTAFLHMNRPSTKTLIDRVNRLISMRRAAIKKNVAVSGTTEEFGEKESLLDDLILQIDEKAETIGDTKEERNENEQKLVRAGECIRQKA 186
            ++KR RF + +D  LL+AV   DAH++  GE    + + L+ F    PS+  +++  P   TL DR   ++  RR  ++   A SG  E+ G++E LLDD+IL +D++ E       ER E E++L+ AGE IR KA
Sbjct:   44 KKKRIRFPEAWDPLLLKAVTASDAHVAPHGETGKRFEQALKLFLDAAPSSQLVNITHPVPLTLRDRFTTIVEKRRVEVRGTAAASGIVEKRGQREELLDDVILAMDKEQERKNALINERTEKEKQLIEAGEAIRGKA 180          
BLAST of Gvermi12869.t1 vs. uniprot
Match: A0A2V3II51_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II51_9FLOR)

HSP 1 Score: 85.1 bits (209), Expect = 4.090e-16
Identity = 47/118 (39.83%), Postives = 69/118 (58.47%), Query Frame = 0
Query:   53 RFRFTDPYDLFLLRAVLKEDAHLSKWGELEATYRKVLEAFAKHIPSTAFLHMNRPSTKTLIDRVNRLISMRRAAIKKNVAVSGTTEEFGEKESLLDDLILQIDEKAETIGDTKEERNE 170
            R RF+  +DLFLL+A+   DAH +  G+ +  + + L+ F   +P +   ++  PS KTL DR  ++IS  R A+  N   SG  E  GE+E LLDDLIL+IDE  E     ++ER +
Sbjct:   76 RIRFSAAWDLFLLKAISAVDAHNASHGKTQPRFEEALQIFCAAVPDSWLANVTAPSWKTLNDRFKKIISEHRKAVNCNAVASGIIEVRGEREPLLDDLILEIDEFEERRRTERDERTD 193          
BLAST of Gvermi12869.t1 vs. uniprot
Match: A0A2V3J3D3_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3D3_9FLOR)

HSP 1 Score: 87.4 bits (215), Expect = 4.400e-16
Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 0
Query:   50 RQKRFRFTDPYDLFLLRAVLKEDAHLSKWGELEATYRKVLEAFAKHIPSTAFLHMNRPSTKTLIDRVNRLISMRRAAIKKNVAVSGTTEEFGEKESLLDDLILQIDE 156
            ++KR RF+  +DLFLL+A+   DAH +  GE++  + + L+ F   +P +    +  PS KTL DR  ++IS  R A+  N   SG  E  GE+E+LLDDLIL IDE
Sbjct:   73 KKKRIRFSAAWDLFLLKAISAVDAHTAPHGEMQPRFEEALQIFLAAVPDSWLATVTAPSWKTLNDRFKKIISEHRKAVNCNAVASGIIEVRGERETLLDDLILDIDE 179          
The following BLAST results are available for this feature:
BLAST of Gvermi12869.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A2V3IGS9_9FLOR1.020e-8262.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITU0_9FLOR2.700e-5061.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICE3_9FLOR4.080e-4160.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IKT4_9FLOR1.610e-3259.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6P0_9FLOR6.780e-2336.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IK68_9FLOR1.320e-2137.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J565_9FLOR6.000e-2055.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3INH1_9FLOR6.710e-1937.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II51_9FLOR4.090e-1639.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J3D3_9FLOR4.400e-1642.99Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 228..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availablePANTHERPTHR37558FAMILY NOT NAMEDcoord: 33..289
NoneNo IPR availablePANTHERPTHR37558:SF1SUBFAMILY NOT NAMEDcoord: 33..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1857219..1858112 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12869.t1Gvermi12869.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1857219..1858112 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12869.t1 ID=Gvermi12869.t1|Name=Gvermi12869.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=298bp
MKKSPPASQISSRNSEIQAQSNVFSSNNQKQTQHKTSRNQGALVARQAKR
QKRFRFTDPYDLFLLRAVLKEDAHLSKWGELEATYRKVLEAFAKHIPSTA
FLHMNRPSTKTLIDRVNRLISMRRAAIKKNVAVSGTTEEFGEKESLLDDL
ILQIDEKAETIGDTKEERNENEQKLVRAGECIRQKAHKSASKTDESDSHE
SLQSKKRPKKRRKRSPVAGSDDAFKTFLFEQAKEKQRLDAERVKLERERL
EIQQKESLRRLELEEKRFELEKRERMQAMEERSKLLRIMDHLSRKLQ*
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