Gvermi6296.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6296.t1
Unique NameGvermi6296.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length540
Homology
BLAST of Gvermi6296.t1 vs. uniprot
Match: A0A7S2EH43_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EH43_TRICV)

HSP 1 Score: 227 bits (579), Expect = 1.810e-63
Identity = 124/185 (67.03%), Postives = 140/185 (75.68%), Query Frame = 0
Query:   82 PKPLKFLRPHFAGLKDFFSSIGKSSSGDSDSGDATFKADVTELRARLANVLAVLAMTMGKPEERESLKFKLAGAKDYEALASKGVKLQGVAVDSTHDNLGSWGHEFVRSLAGEIGQEYGSRVIDGADPASDEPFEDLLQMVRAVVPFSVAHNAEAEAVDLLIEVQRLKFLLTLDTIDETNYQRIC 266
            PKPLKFLRPHF  +K  ++S+    +GD    +A    ++  LRARLA+VLAVLAMTMGKPEERESLKFKL   KDY+ L  +G   +   VD   DNLGSWGHEFVRSLAGEIGQEY +RV+DGADP SD PF DLL MV  +VPF V+HNAEAEAVDLLIEVQRLK LL LDTIDE NY RIC
Sbjct:   94 PKPLKFLRPHFGKIKAHYTSL----AGD----EAVSDGEMLSLRARLADVLAVLAMTMGKPEERESLKFKLTAFKDYDQLKKRG---EAPKVDD--DNLGSWGHEFVRSLAGEIGQEYNTRVLDGADPESDVPFVDLLSMVDVIVPFHVSHNAEAEAVDLLIEVQRLKKLLDLDTIDENNYGRIC 265          
BLAST of Gvermi6296.t1 vs. uniprot
Match: A0A448ZR97_9STRA (Uncharacterized protein n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A448ZR97_9STRA)

HSP 1 Score: 232 bits (591), Expect = 4.650e-63
Identity = 119/185 (64.32%), Postives = 144/185 (77.84%), Query Frame = 0
Query:   82 PKPLKFLRPHFAGLKDFFSSIGKSSSGDSDSGDATFKADVTELRARLANVLAVLAMTMGKPEERESLKFKLAGAKDYEALASKGVKLQGVAVDSTHDNLGSWGHEFVRSLAGEIGQEYGSRVIDGADPASDEPFEDLLQMVRAVVPFSVAHNAEAEAVDLLIEVQRLKFLLTLDTIDETNYQRIC 266
            PKPLKFLRPHF  LK  + S+ K  +       ++ + +  E RARLA+V+AVLAMTM KPE+RESLKFKL+G KDY+ALA+    +QG + + + DNLGSWGHEFVRSLAGEIGQEY  R+IDGADP SDE FEDLL+ V  +VPF + HNAEAEAVDLLIEVQRLKFLL LD+ID+ N++RIC
Sbjct:   92 PKPLKFLRPHFESLKTLYLSLQKEEA-------SSMEKEPLEFRARLADVVAVLAMTMSKPEDRESLKFKLSGDKDYDALAA----MQGESKNESEDNLGSWGHEFVRSLAGEIGQEYNQRLIDGADPDSDEAFEDLLKFVHVIVPFHLTHNAEAEAVDLLIEVQRLKFLLQLDSIDDKNFRRIC 265          
BLAST of Gvermi6296.t1 vs. uniprot
Match: A0A1Z5KBF7_FISSO (26S proteasome regulatory subunit N1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBF7_FISSO)

HSP 1 Score: 231 bits (589), Expect = 9.110e-63
Identity = 125/186 (67.20%), Postives = 144/186 (77.42%), Query Frame = 0
Query:   82 PKPLKFLRPHFAGLKDFFSSI-GKSSSGDSDSGDATFKADVTELRARLANVLAVLAMTMGKPEERESLKFKLAGAKDYEALASKGVKLQGVAVDSTHDNLGSWGHEFVRSLAGEIGQEYGSRVIDGADPASDEPFEDLLQMVRAVVPFSVAHNAEAEAVDLLIEVQRLKFLLTLDTIDETNYQRIC 266
            PKPLKFLRPHF+ LK+ F+SI G+SSS          +  +  LRARLA+VL+VLAMTMGKPE+RESL FKLAGAKDYE LA  G + +  A     DNLGSWGHE+VRSLAGEIG+EY +RVI G++P  DEPF DLL+MV  +VPF V HNAEAEAVDLLIEVQRLK LL +DTIDE NYQRIC
Sbjct:   93 PKPLKFLRPHFSVLKNLFNSITGESSS---------VETQMLGLRARLADVLSVLAMTMGKPEDRESLHFKLAGAKDYEPLAQHGAEYKSAA-----DNLGSWGHEYVRSLAGEIGEEYAARVIAGSNPEEDEPFADLLRMVDVIVPFHVNHNAEAEAVDLLIEVQRLKNLLKIDTIDEKNYQRIC 264          
BLAST of Gvermi6296.t1 vs. uniprot
Match: B7G2F7_PHATC (Regulatory proteasome non-atpase subunit 1 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2F7_PHATC)

HSP 1 Score: 229 bits (584), Expect = 3.680e-62
Identity = 126/185 (68.11%), Postives = 140/185 (75.68%), Query Frame = 0
Query:   82 PKPLKFLRPHFAGLKDFFSSIGKSSSGDSDSGDATFKADVTELRARLANVLAVLAMTMGKPEERESLKFKLAGAKDYEALASKGVKLQGVAVDSTHDNLGSWGHEFVRSLAGEIGQEYGSRVIDGADPASDEPFEDLLQMVRAVVPFSVAHNAEAEAVDLLIEVQRLKFLLTLDTIDETNYQRIC 266
            PKPLKFLRPHFA LK  + +IG     D D+       ++ ELRARL++VLAVLAMTMGKPEERESLKFKLAG KDY  L  +  K      D   DNLGSWGHEFVRSLAGEIGQEY  RVIDGADP  D+ FEDLL M+  +VPF V+HNAE+EA+DLLIEVQRLK LL LDTIDETNYQRIC
Sbjct:   80 PKPLKFLRPHFALLKSCYDAIG-----DCDN-------ELIELRARLSDVLAVLAMTMGKPEERESLKFKLAGVKDYALLRDR--KSPSKHAD---DNLGSWGHEFVRSLAGEIGQEYDQRVIDGADPNQDDSFEDLLSMIDVIVPFHVSHNAESEAIDLLIEVQRLKNLLKLDTIDETNYQRIC 247          
BLAST of Gvermi6296.t1 vs. uniprot
Match: A0A7S1UWM2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWM2_9STRA)

HSP 1 Score: 229 bits (585), Expect = 4.720e-62
Identity = 126/186 (67.74%), Postives = 141/186 (75.81%), Query Frame = 0
Query:   82 PKPLKFLRPHFAGLKDFFSSIGKSSSGDSDSGDATFKADVTELRARLANVLAVLAMTMGKPEERESLKFKLAGAKDYEALASKGVKLQGVAVDSTHDNLGSWGHEFVRSLAGEIGQEYGSRVID-GADPASDEPFEDLLQMVRAVVPFSVAHNAEAEAVDLLIEVQRLKFLLTLDTIDETNYQRIC 266
            PKPLKFLRPH+  +KD  +SI  S S      +A   A+  ELRARLA+VLAVLAMTMGK +ERESLKFKLAG KDY+ALA+KG      A     DNLGSWGHEFVRSLAGEIGQEY  RV++  ADP  DEPF+DLL MVR +VPF + HNAEAEA+DLLIEVQRL  LLTLDTID  NYQRIC
Sbjct:  125 PKPLKFLRPHYQVIKDLHTSIISSPS------EADPDAEALELRARLADVLAVLAMTMGKHDERESLKFKLAGMKDYDALAAKGK-----ASKHAEDNLGSWGHEFVRSLAGEIGQEYNQRVLEESADPDQDEPFKDLLGMVRVIVPFHLTHNAEAEAIDLLIEVQRLPTLLTLDTIDAENYQRIC 299          
BLAST of Gvermi6296.t1 vs. uniprot
Match: A0A7R9Z915_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z915_9STRA)

HSP 1 Score: 218 bits (556), Expect = 5.210e-62
Identity = 122/186 (65.59%), Postives = 140/186 (75.27%), Query Frame = 0
Query:   82 PKPLKFLRPHFAGLKDFFSSIGKSSSGDSDSGDATFKADVTELRARLANVLAVLAMTMGKPEERESLKFKLAGAKDYEALASKGVKLQGVAVDSTHDNLGSWGHEFVRSLAGEIGQEYGSRVIDGA-DPASDEPFEDLLQMVRAVVPFSVAHNAEAEAVDLLIEVQRLKFLLTLDTIDETNYQRIC 266
            PKPLKFLRPHF+ +K+  +S     SGD    +A    ++  LRARLA+VL+VLAMTMGK EERESLKFKL+  KDY AL ++G   +   VD   DNLGSWGHEFVRSLAGEIGQEY +RV+DGA DP  D PF DLL MV  +VPF V+HNAEAEAVDLLIEVQRLK LL L+TIDE NY RIC
Sbjct:   94 PKPLKFLRPHFSKIKELHASF----SGD----EAVSDVEMLVLRARLADVLSVLAMTMGKHEERESLKFKLSAFKDYSALEARG---ESSRVDD--DNLGSWGHEFVRSLAGEIGQEYNARVLDGAGDPDDDAPFSDLLSMVDVIVPFHVSHNAEAEAVDLLIEVQRLKKLLNLETIDENNYGRIC 266          
BLAST of Gvermi6296.t1 vs. uniprot
Match: A0A7S2EGD7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EGD7_TRICV)

HSP 1 Score: 227 bits (579), Expect = 2.090e-61
Identity = 124/185 (67.03%), Postives = 140/185 (75.68%), Query Frame = 0
Query:   82 PKPLKFLRPHFAGLKDFFSSIGKSSSGDSDSGDATFKADVTELRARLANVLAVLAMTMGKPEERESLKFKLAGAKDYEALASKGVKLQGVAVDSTHDNLGSWGHEFVRSLAGEIGQEYGSRVIDGADPASDEPFEDLLQMVRAVVPFSVAHNAEAEAVDLLIEVQRLKFLLTLDTIDETNYQRIC 266
            PKPLKFLRPHF  +K  ++S+    +GD    +A    ++  LRARLA+VLAVLAMTMGKPEERESLKFKL   KDY+ L  +G   +   VD   DNLGSWGHEFVRSLAGEIGQEY +RV+DGADP SD PF DLL MV  +VPF V+HNAEAEAVDLLIEVQRLK LL LDTIDE NY RIC
Sbjct:   94 PKPLKFLRPHFGKIKAHYTSL----AGD----EAVSDGEMLSLRARLADVLAVLAMTMGKPEERESLKFKLTAFKDYDQLKKRG---EAPKVDD--DNLGSWGHEFVRSLAGEIGQEYNTRVLDGADPESDVPFVDLLSMVDVIVPFHVSHNAEAEAVDLLIEVQRLKKLLDLDTIDENNYGRIC 265          
BLAST of Gvermi6296.t1 vs. uniprot
Match: A0A7S2DXF7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2DXF7_9STRA)

HSP 1 Score: 223 bits (569), Expect = 5.020e-60
Identity = 122/185 (65.95%), Postives = 136/185 (73.51%), Query Frame = 0
Query:   82 PKPLKFLRPHFAGLKDFFSSIGKSSSGDSDSGDATFKADVTELRARLANVLAVLAMTMGKPEERESLKFKLAGAKDYEALASKGVKLQGVAVDSTHDNLGSWGHEFVRSLAGEIGQEYGSRVIDGADPASDEPFEDLLQMVRAVVPFSVAHNAEAEAVDLLIEVQRLKFLLTLDTIDETNYQRIC 266
            PKPLKFLRPHF  LK   SSI  ++  D+D         +  LRARLA+VLAVLAMTMGK EERESL+FKL+G KDY+ LA +G   +        DNLGSWGHEF RSLAGEIGQEY +RV+DGADP  D PF DLL MV  +VPF V+HNAEAEAVDLLIEVQRLK LL LDTIDE NY RIC
Sbjct:   98 PKPLKFLRPHFDKLKKLHSSIDSNAVKDND---------MLVLRARLADVLAVLAMTMGKHEERESLQFKLSGKKDYDTLADRGETSR-----IEEDNLGSWGHEFARSLAGEIGQEYNARVLDGADPEDDTPFADLLGMVDVIVPFHVSHNAEAEAVDLLIEVQRLKKLLDLDTIDENNYGRIC 268          
BLAST of Gvermi6296.t1 vs. uniprot
Match: A0A7S4K560_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K560_9STRA)

HSP 1 Score: 221 bits (562), Expect = 4.500e-59
Identity = 122/185 (65.95%), Postives = 139/185 (75.14%), Query Frame = 0
Query:   82 PKPLKFLRPHFAGLKDFFSSIGKSSSGDSDSGDATFKADVTELRARLANVLAVLAMTMGKPEERESLKFKLAGAKDYEALASKGVKLQGVAVDSTHDNLGSWGHEFVRSLAGEIGQEYGSRVIDGADPASDEPFEDLLQMVRAVVPFSVAHNAEAEAVDLLIEVQRLKFLLTLDTIDETNYQRIC 266
            PKPLKFLRP FA +KD ++S     SGD    +A    ++  LRARLA+VLAVLAMTMGK EERESLKFKL+  KDY+AL ++G   Q   VD   DNLGSWGHEFVRSLAGEIGQEY +RV++G DP  D PF DLL MV  +VPF V+HNAEAEAVDLLIEVQRLK LL LD+ID  NY RIC
Sbjct:   94 PKPLKFLRPQFAKIKDLYASF----SGD----EAVSDIEMLVLRARLADVLAVLAMTMGKHEERESLKFKLSAFKDYDALTTRG---QASRVDD--DNLGSWGHEFVRSLAGEIGQEYNARVLEGEDPDDDTPFSDLLSMVDVIVPFHVSHNAEAEAVDLLIEVQRLKKLLDLDSIDGNNYGRIC 265          
BLAST of Gvermi6296.t1 vs. uniprot
Match: A0A7S0GCY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GCY1_9STRA)

HSP 1 Score: 207 bits (527), Expect = 3.970e-58
Identity = 115/185 (62.16%), Postives = 131/185 (70.81%), Query Frame = 0
Query:   82 PKPLKFLRPHFAGLKDFFSSIGKSSSGDSDSGDATFKADVTELRARLANVLAVLAMTMGKPEERESLKFKLAGAKDYEALASKGVKLQGVAVDSTHDNLGSWGHEFVRSLAGEIGQEYGSRVIDGADPASDEPFEDLLQMVRAVVPFSVAHNAEAEAVDLLIEVQRLKFLLTLDTIDETNYQRIC 266
            PKPLKFLRP F  LK  + SI  +          T ++D+   RARLA+VLAVLAMTMGK EERESLKFKL G  DY  L  + V+        T DN+GSWGHEFVRSLAGEIGQEY +RV DGADP  D  F D+L MV  +VPF V+HNAE+EAVDLLIEVQRLK LL +DTID TNY+RIC
Sbjct:   26 PKPLKFLRPCFDSLKKAYGSISAT----------TDESDLLVFRARLADVLAVLAMTMGKIEERESLKFKLMGLADYALLKERKVEHS-----VTDDNMGSWGHEFVRSLAGEIGQEYNARVNDGADPDEDSSFADILGMVDIIVPFHVSHNAESEAVDLLIEVQRLKRLLDIDTIDNTNYRRIC 195          
The following BLAST results are available for this feature:
BLAST of Gvermi6296.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2EH43_TRICV1.810e-6367.03Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A448ZR97_9STRA4.650e-6364.32Uncharacterized protein n=2 Tax=Bacillariaceae Tax... [more]
A0A1Z5KBF7_FISSO9.110e-6367.2026S proteasome regulatory subunit N1 n=2 Tax=Fistu... [more]
B7G2F7_PHATC3.680e-6268.11Regulatory proteasome non-atpase subunit 1 n=1 Tax... [more]
A0A7S1UWM2_9STRA4.720e-6267.74Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7R9Z915_9STRA5.210e-6265.59Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S2EGD7_TRICV2.090e-6167.03Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2DXF7_9STRA5.020e-6065.95Hypothetical protein (Fragment) n=2 Tax=Lithodesmi... [more]
A0A7S4K560_9STRA4.500e-5965.95Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0GCY1_9STRA3.970e-5862.16Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040892RPN1, N-terminalPFAMPF17781RPN1_RPN2_Ncoord: 82..267
e-value: 1.0E-42
score: 146.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..85
NoneNo IPR availablePANTHERPTHR10943:SF1226S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 2 HOMOLOGcoord: 82..266
NoneNo IPR availablePANTHERPTHR1094326S PROTEASOME NON-ATPASE REGULATORY SUBUNITcoord: 82..266
NoneNo IPR availableCDDcd18186BTB_POZ_ZBTB_KLHL-likecoord: 450..512
e-value: 7.4813E-4
score: 36.763

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_151contigScGOVlb_151:2301..4396 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6296.t1Gvermi6296.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_151 2301..4396 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6296.t1 ID=Gvermi6296.t1|Name=Gvermi6296.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=540bp
MEYVIDSIQYKHGSQRQGCSRTDSHQSRFIVQQKIQKGCRRDQNGRIHER
ERQGAQGALAWKRPGRDGDGTAQRDGEHDERPKPLKFLRPHFAGLKDFFS
SIGKSSSGDSDSGDATFKADVTELRARLANVLAVLAMTMGKPEERESLKF
KLAGAKDYEALASKGVKLQGVAVDSTHDNLGSWGHEFVRSLAGEIGQEYG
SRVIDGADPASDEPFEDLLQMVRAVVPFSVAHNAEAEAVDLLIEVQRLKF
LLTLDTIDETNYQRICFKKSPSTTLNNLSATMAAAAADTSRHHHRHPQHQ
YLHDEDVVVVGRGNTATDDWFARGFHHGGGGDDDPEVVYHDRHDTRSSTS
EHKDDCDASLAGVQSNDGGFLMGEHDDFDGTAAAGDAASQSRIARADDDD
DEGSVAEGALLWRIHPKSSYSDWLIVVTYDDASAAGGGGGGLQQQKYQQT
SYHVHKALLASGPRHSLVFRSLFQADKAFQLFLDLLYDRNMHVDHADEGM
KRHVVALHQLAEAHQVASLSHEIATAFVPRIDLLDADRY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040892RPN1_N