Gvermi9683.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi9683.t1
Unique NameGvermi9683.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length257
Homology
BLAST of Gvermi9683.t1 vs. uniprot
Match: A0A2V3ILR8_9FLOR (Mitochondrial inner membrane protease subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILR8_9FLOR)

HSP 1 Score: 415 bits (1067), Expect = 2.750e-144
Identity = 202/256 (78.91%), Postives = 235/256 (91.80%), Query Frame = 0
Query:    1 MRQKGIYRSVEYVIEKLSLDGREIVSTAAVPPSRLDQVVATVRPLNSLLPRFERAWPVDVALGDAVLWTYKQDLVRCALVTIAMSVSFVAGGLLGPTVLGIYSIPTVSMEPSLRVGDALLVEKLSLRATPPRKGEIVLFTPPWRLKSILMSSAQRQSASRVPRRNDLFVKRVVAVAGDVIEVRLTGVFVNGRKVDDIVPNSPIVEPRHIPEGFVFVVGDNASQSLDSRYWGLLPIDCVVGRPVARIFPPQRMRMSV 256
            MRQ+G+YRSVEYVIEKL+LDG+E+ +TA+VPPSR+ +VVATVRPLN LLPRFERAWPV+VA+GDAVLWTYK+DL+RCALVT+AMSV+FV  GL+GPTVLGIYSIPTVSMEPSL VGDALLVEK+SLRATPPRKGEIVLFTPP RLKSIL SS Q  +++R+P RNDLF+KRVVAV GDVIEVRLTGVFVN  K+D++VPNSPIV P  IP+G++FV+GDN S+SLDSRYWGLLPI+CVVGRPVARIFPPQR+ + V
Sbjct:   60 MRQRGVYRSVEYVIEKLTLDGQEVFTTASVPPSRVHEVVATVRPLNRLLPRFERAWPVEVAVGDAVLWTYKRDLIRCALVTLAMSVTFVTIGLIGPTVLGIYSIPTVSMEPSLYVGDALLVEKISLRATPPRKGEIVLFTPPSRLKSILTSSNQHLASTRIPHRNDLFIKRVVAVPGDVIEVRLTGVFVNAVKIDEVVPNSPIVAPCTIPDGYIFVIGDNPSKSLDSRYWGLLPIECVVGRPVARIFPPQRLHVPV 315          
BLAST of Gvermi9683.t1 vs. uniprot
Match: A0A8J5X9V5_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X9V5_DIALT)

HSP 1 Score: 118 bits (296), Expect = 1.660e-28
Identity = 64/154 (41.56%), Postives = 92/154 (59.74%), Query Frame = 0
Query:  104 IPTVSMEPSLRVGDALLVEKLSLRATPPRKGEIVLFTPPWRLKSILMSSAQRQSASRVPRRNDLFVKRVVAVAGDVIEVRLTGVFVNGRKVDD--IVPNSPIVEPRH-IPEGFVFVVGDNASQSLDSRYWGLLPIDCVVGRPVARIFPPQRMRM 254
            IP++SM P+  VGD L VEK+S R  P  + E+V+F PP     +          S  P+ ND  +KR+VA+AGD +EVR   ++VNG +VD+  I        PR  +PEG VFV+GDN + S DS YWG LP + ++G+ V + +PP R+ +
Sbjct:  120 IPSLSMFPAFEVGDQLAVEKVSKRFAPMARDEVVVFKPPPAFFEL----------SGKPQDNDALIKRIVAIAGDTVEVRNGELYVNGEQVDEPFIAERPEYTMPRFTVPEGCVFVLGDNRNHSFDSHYWGPLPEENIIGKAVLKYWPPWRLAL 263          
BLAST of Gvermi9683.t1 vs. uniprot
Match: A0A5J4YRP0_PORPP (Mitochondrial inner membrane protease subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRP0_PORPP)

HSP 1 Score: 117 bits (294), Expect = 3.640e-28
Identity = 77/190 (40.53%), Postives = 105/190 (55.26%), Query Frame = 0
Query:   68 WTYKQ--DLVRCALVTIAMSVSFVAGGLL---GPTVLGIYSIPTVSMEPSLRVGDALLVEKLSLRATPPRKGEIVLFTPPWRLKSILMSSAQRQSASRVPRRNDLFVKRVVAVAGDVIEVRLTGVFVNGRKVDDIVPNSPIVEPRHIPEGFVFVVGDNASQSLDSRYWGLLPIDCVVGRPVARIFPPQRM 252
            WT +Q  DLV  A  T+  ++  VA GL    G  V  +Y+IPT SM P+L  GD LLVEKLS+   PP+  EIVLF PP  L +      Q        +  D FVKRV A  GDV+ V    V +N + V+     +    P  +P G+ FV+GDN  +S+DSRY+G +  D ++GRP+ R FP  ++
Sbjct:   68 WTDEQRRDLVAFAAATLIGNL--VALGLFCLFGAQVASVYAIPTTSMVPTLNAGDGLLVEKLSIHVRPPQNNEIVLFHPPEELVN------QVHKLGGHVQYKDTFVKRVAASGGDVVHVTHGQVLINSKFVES-ADAALEYGPVTVPHGYFFVLGDNECRSVDSRYFGFVSEDLLIGRPMLRCFPLNKL 248          
BLAST of Gvermi9683.t1 vs. uniprot
Match: A0A448ZBV4_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV4_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.900e-28
Identity = 98/270 (36.30%), Postives = 144/270 (53.33%), Query Frame = 0
Query:    1 MRQKGIYRSVEY-VIEKLSLDGREIVSTAAVPPSRLDQVVATVRPLNSLLPRFERAWPVDVALGDAV-LWTYKQDLVRCALVTIAMSVSFVAGGLLGPTVLGIYSIPTVSMEPSLRVGDALLVEKLSLRATPPRK---GEIVLFTPPWRLKSILMSSAQRQSASRVPRRNDLFVKRVVAVAGDVIEVRLTG-VFVNGRKV----DDIVPNSPI------VEPRH---IPEGFVFVVGDNASQSLDSRYWGLLPIDCVVGRPVARIFPPQR 251
            M ++G Y  VEY ++  L  DGRE  ++       L       +P+  L+ + ER WPV V   D   L+T     +  A  ++  + S +    L    + ++ IP+ SM+P+L+VGD LLV+K+S R TP RK   G++VLF+PP RL+ I+  +    S+       DLFVKR+ A  GD + V   G V VNG+ V     D+    P+      +EPR    I +  VFV+GD +S S+DSR WG L  + +VGRP+ RI+P  R
Sbjct:  361 MFEQGAYPGVEYRILRILDRDGRERFTSCPGADYEL-------KPVYPLVAQLERPWPVRVNERDIPKLFTPSMYNLLSAFGSLFTAASGLFVAFLLSQAISLFFIPSKSMDPTLKVGDVLLVDKVSSR-TPFRKNEVGDMVLFSPPSRLQEIVAKNGGNLSS------RDLFVKRIAASPGDRVTVYKDGKVDVNGQDVVAGRRDLCEAEPLRLIEKYIEPREDKIIDQKEVFVMGDCSSVSVDSRVWGSLEAENIVGRPIVRIWPLDR 616          
BLAST of Gvermi9683.t1 vs. uniprot
Match: U5D806_9CHRO (Signal peptidase I n=1 Tax=Rubidibacter lacunae KORDI 51-2 TaxID=582515 RepID=U5D806_9CHRO)

HSP 1 Score: 114 bits (285), Expect = 1.190e-27
Identity = 69/156 (44.23%), Postives = 91/156 (58.33%), Query Frame = 0
Query:  104 IPTVSMEPSLRVGDALLVEKLSLRATPPRKGEIVLFTPPWRLKSILMSSAQRQSASRVPRRNDLFVKRVVAVAGDVIEVRLTGVFVNGRKVDDIVPNSPIVEPRHIPEGFV-------FVVGDNASQSLDSRYWGLLPIDCVVGRPVARIFPPQRM 252
            IP+ SM P+L VGD L++EK+S R  PPR+GEIV+FTPP  L+     S Q             F+KRVVA+ GD + VR   VF++GR +D+   ++ I EP   P G V       FV+GDN + S DS  WG LP D  +GR V R +PP R+
Sbjct:   49 IPSESMLPTLEVGDRLVIEKVSYRFRPPRRGEIVVFTPPPLLQQQGYESDQA------------FIKRVVAIEGDRLRVRNGRVFLDGRPLDE---SAYIAEPPAYPLGPVVVPPESLFVMGDNRNNSRDSHIWGFLPADHALGRAVFRFWPPSRI 189          
BLAST of Gvermi9683.t1 vs. uniprot
Match: A0A0D2QJW9_GOSRA (Peptidase_S26 domain-containing protein n=21 Tax=Gossypium TaxID=3633 RepID=A0A0D2QJW9_GOSRA)

HSP 1 Score: 118 bits (295), Expect = 1.380e-27
Identity = 65/157 (41.40%), Postives = 93/157 (59.24%), Query Frame = 0
Query:  103 SIPTVSMEPSLRVGDALLVEKLSLRATPPRKGEIVLFTPPWRLKSILMSSAQRQSASRVPRRNDLFVKRVVAVAGDVIEVRLTGVFVNGRKVDDIVPNSPI---VEPRHIPEGFVFVVGDNASQSLDSRYWGLLPIDCVVGRPVARIFPPQRMRMSV 256
            SIP+ SM P+L VGD +L EK+S     P   +IV+F  P  L+    SS            ND+F+KR+VA AGD +E R   +F+NG   D+     P+   ++P  +PEG+VFV+GDN + S DS YWG LPI+ +VGR V R +PP ++  ++
Sbjct:  207 SIPSASMYPTLGVGDRILAEKVSYFFREPEVSDIVIFRAPPILQEYGYSS------------NDVFIKRIVAKAGDCVEARDGKLFINGVAQDEDFVLEPLAYKMDPMVVPEGYVFVLGDNRNNSFDSHYWGPLPIENIVGRSVFRYWPPSKVSATI 351          
BLAST of Gvermi9683.t1 vs. uniprot
Match: UPI000B7938F3 (thylakoidal processing peptidase 1, chloroplastic-like n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B7938F3)

HSP 1 Score: 116 bits (290), Expect = 9.080e-27
Identity = 66/157 (42.04%), Postives = 93/157 (59.24%), Query Frame = 0
Query:  103 SIPTVSMEPSLRVGDALLVEKLSLRATPPRKGEIVLFTPPWRLKSILMSSAQRQSASRVPRRNDLFVKRVVAVAGDVIEVRLTGVFVNGRKVDDIVPNSPI---VEPRHIPEGFVFVVGDNASQSLDSRYWGLLPIDCVVGRPVARIFPPQRMRMSV 256
            SIP+ SM P+L VGD +L EK+S     P   +IV+F  P  L+ I  SS             D F+KR+VA AGD++EVR   ++VNG   D+     P+   +EP  IPEG+VFV+GDN + S DS  WG LP++ +VGR V R +PP ++  ++
Sbjct:  222 SIPSTSMYPTLDVGDRILAEKVSYIFRKPEVSDIVIFKAPPILQEIGYSSG------------DAFIKRIVATAGDIVEVREGKLYVNGVVQDEDFILEPLAYEMEPVLIPEGYVFVMGDNRNNSFDSHNWGPLPVENIVGRSVFRYWPPSKVSNTI 366          
BLAST of Gvermi9683.t1 vs. uniprot
Match: A0A1U8MA61_GOSHI (probable thylakoidal processing peptidase 2, chloroplastic n=23 Tax=Gossypium TaxID=3633 RepID=A0A1U8MA61_GOSHI)

HSP 1 Score: 115 bits (288), Expect = 1.440e-26
Identity = 65/157 (41.40%), Postives = 94/157 (59.87%), Query Frame = 0
Query:  103 SIPTVSMEPSLRVGDALLVEKLSLRATPPRKGEIVLFTPPWRLKSILMSSAQRQSASRVPRRNDLFVKRVVAVAGDVIEVRLTGVFVNGRKVDDIVPNSPI---VEPRHIPEGFVFVVGDNASQSLDSRYWGLLPIDCVVGRPVARIFPPQRMRMSV 256
            SIP+ SM P+L VGD +L EK+S     P   +IV+FT P  L+ I  SS             D+F+KR+VA AGD +E R   + +NG + D+     P+   +EP  +PEG+VFV+GDN ++S DS  WG LPID ++GR V R +PP ++  ++
Sbjct:  209 SIPSSSMYPTLDVGDRILAEKVSYFFREPEVSDIVIFTAPPILQEIGYSSG------------DVFIKRIVAKAGDCVEARDGKLLINGIEQDEDFVLEPLGYEMEPLVVPEGYVFVLGDNRNKSFDSHDWGPLPIDNIIGRSVFRYWPPSKVSDTI 353          
BLAST of Gvermi9683.t1 vs. uniprot
Match: A0A7J8MSL1_9ROSI (Peptidase_S26 domain-containing protein n=3 Tax=Gossypium TaxID=3633 RepID=A0A7J8MSL1_9ROSI)

HSP 1 Score: 114 bits (284), Expect = 1.500e-26
Identity = 64/157 (40.76%), Postives = 93/157 (59.24%), Query Frame = 0
Query:  103 SIPTVSMEPSLRVGDALLVEKLSLRATPPRKGEIVLFTPPWRLKSILMSSAQRQSASRVPRRNDLFVKRVVAVAGDVIEVRLTGVFVNGRKVDDIVPNSPI---VEPRHIPEGFVFVVGDNASQSLDSRYWGLLPIDCVVGRPVARIFPPQRMRMSV 256
            SIP+ SM P+L VGD +L EK+S     P   +IV+FT P  L+ I   S             D+F+KR+VA AGD +E R   + +NG + D+     P+   +EP  +PEG+VFV+GDN ++S DS  WG LPID ++GR V R +PP ++  ++
Sbjct:  136 SIPSSSMYPTLDVGDRILAEKVSYFFREPEVSDIVIFTAPPILQEIGYGSG------------DVFIKRIVAKAGDCVEARDGKLLINGIEQDEDFVLEPLGYEMEPLVVPEGYVFVLGDNRNKSFDSHDWGPLPIDNIIGRSVFRYWPPSKVSDTI 280          
BLAST of Gvermi9683.t1 vs. uniprot
Match: UPI0011D21B85 (probable thylakoidal processing peptidase 2, chloroplastic n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D21B85)

HSP 1 Score: 115 bits (288), Expect = 1.700e-26
Identity = 67/153 (43.79%), Postives = 91/153 (59.48%), Query Frame = 0
Query:  103 SIPTVSMEPSLRVGDALLVEKLSLRATPPRKGEIVLFTPPWRLKSILMSSAQRQSASRVPRRNDLFVKRVVAVAGDVIEVRLTGVFVNGRKVDD---IVPNSPIVEPRHIPEGFVFVVGDNASQSLDSRYWGLLPIDCVVGRPVARIFPPQRM 252
            SIP+ SM+P+L VGD +L EK+S     P   +IV+F  P  L+ +  SSA            D+F+KR+VA AGD +EV    + VNG   D+   + P S  +EP  IPEG+VFV+GDN + S DS  WG LP+  +VGR V R +PP R+
Sbjct:  220 SIPSTSMKPTLDVGDRILAEKVSYFFRKPEVSDIVIFKAPPILQEVGFSSA------------DVFIKRIVAKAGDYVEVHDGKLLVNGVAQDEDFILEPLSYEMEPMLIPEGYVFVMGDNRNNSFDSHNWGPLPVKNIVGRSVFRYWPPSRV 360          
The following BLAST results are available for this feature:
BLAST of Gvermi9683.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILR8_9FLOR2.750e-14478.91Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A8J5X9V5_DIALT1.660e-2841.56Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A5J4YRP0_PORPP3.640e-2840.53Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A448ZBV4_9STRA5.900e-2836.30Mitochondrial inner membrane protease subunit n=1 ... [more]
U5D806_9CHRO1.190e-2744.23Signal peptidase I n=1 Tax=Rubidibacter lacunae KO... [more]
A0A0D2QJW9_GOSRA1.380e-2741.40Peptidase_S26 domain-containing protein n=21 Tax=G... [more]
UPI000B7938F39.080e-2742.04thylakoidal processing peptidase 1, chloroplastic-... [more]
A0A1U8MA61_GOSHI1.440e-2641.40probable thylakoidal processing peptidase 2, chlor... [more]
A0A7J8MSL1_9ROSI1.500e-2640.76Peptidase_S26 domain-containing protein n=3 Tax=Go... [more]
UPI0011D21B851.700e-2643.79probable thylakoidal processing peptidase 2, chlor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 97..113
score: 35.71
coord: 209..228
score: 51.55
coord: 168..180
score: 45.79
IPR000223Peptidase S26A, signal peptidase ITIGRFAMTIGR02227TIGR02227coord: 89..248
e-value: 4.1E-28
score: 96.3
IPR000223Peptidase S26A, signal peptidase IPANTHERPTHR43390SIGNAL PEPTIDASE Icoord: 93..252
IPR019533Peptidase S26PFAMPF10502Peptidase_S26coord: 88..244
e-value: 3.0E-30
score: 105.4
IPR019533Peptidase S26CDDcd06530S26_SPase_Icoord: 101..242
e-value: 1.57542E-17
score: 73.0035
NoneNo IPR availableGENE3D2.10.109.10Umud Fragment, subunit Acoord: 96..256
e-value: 6.2E-29
score: 102.5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..256
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..76
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
IPR019758Peptidase S26A, signal peptidase I, conserved sitePROSITEPS00761SPASE_I_3coord: 214..227
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 98..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24230contigScGOVlb_24230:1761906..1762676 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi9683.t1Gvermi9683.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24230 1761906..1762676 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi9683.t1 ID=Gvermi9683.t1|Name=Gvermi9683.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=257bp
MRQKGIYRSVEYVIEKLSLDGREIVSTAAVPPSRLDQVVATVRPLNSLLP
RFERAWPVDVALGDAVLWTYKQDLVRCALVTIAMSVSFVAGGLLGPTVLG
IYSIPTVSMEPSLRVGDALLVEKLSLRATPPRKGEIVLFTPPWRLKSILM
SSAQRQSASRVPRRNDLFVKRVVAVAGDVIEVRLTGVFVNGRKVDDIVPN
SPIVEPRHIPEGFVFVVGDNASQSLDSRYWGLLPIDCVVGRPVARIFPPQ
RMRMSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000223Pept_S26A_signal_pept_1
IPR019533Peptidase_S26
IPR019758Pept_S26A_signal_pept_1_CS
IPR036286LexA/Signal_pep-like_sf