Gvermi9672.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi9672.t1
Unique Name	Gvermi9672.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	561

Homology

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BLAST of Gvermi9672.t1 vs. uniprot
Match: A0A2V3IQP6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQP6_9FLOR)

HSP 1 Score: 269 bits (688), Expect = 1.020e-79
Identity = 192/482 (39.83%), Postives = 280/482 (58.09%), Query Frame = 0

Query:  101 QTHVAGREIKNFPPVSSGEAVSVSLSTADQMDRQHQQRAHIFPERMIAENSVQKDIKEHTASDGSVDPGRRSADQNADLKRQINDRVKAVMKNADKSKRLSFFSVLHPALAAALSPEKSEEKADIPRPPLSTIDYSSGPLKGTESRDQEALRFPAVVQSKQSVLAEMQEKAAELRESEGIEQKEHQFDAQDSQARINEIGERFGEEGKALGLVRR-----DEFQHPAQNY-QREKA----STGGGID-LNAKEKESQDGEVDETISSPRAHKGITRLESDKASDNGNTESANIYSSPAHSTNNLT----SVLNSTEVDEPSRTGKVLKTTAKYWHGFVNQVKRVVGAFRSAKPASSETTKDQQTDNFSEDDVQDMVNEVVREIQTRTDGRKQLDLAGGSVAKDGN----GEHVAHETG---KGPLLMLRTKTVVSADVVADAVTSTAKKMLSERGDSISHETSSRLLREVQDKLEELLQPID 560
            Q      +IKNF P +     +     A   +R H   + I+      E+ V  ++KE+ A+  +  P ++      DL  QIN +VKA ++NADK+KRLS FSVLHPALAAAL+ EK+ E ++IPR PL+ +DY++GPLKGTES D++AL++   V S+Q++LA++QE     RE+ G++     F  ++   R+ E GE      +    V       D  +H    Y Q+E+A         +D +NA+E+     E D  I  P  +    R  S + S+N  +E++N    P   ++ LT    + LN T V+E S   +++KTTA+YWHGFV++VKRVV A ++ K + S+T  ++  D+F+E       NE+V ++Q R     + D+     +K GN    G+   H +G   +G LLMLRTKT+VS D VADAVTS AK+MLSERGDS+S ETSSR LREVQDK+EELLQP++
Sbjct:   76 QQEALASDIKNFVPDTKTGKGNQEDRIASMQNRDH--GSEIYARAEHPEDPVGNELKEYGANSDAASPFKKVQSNKVDLPEQINRKVKAALQNADKAKRLSIFSVLHPALAAALTSEKTPEHSNIPRAPLNDVDYTTGPLKGTESHDRDALQYANTVPSRQAILAQIQEAVPRARETRGVKHVARGFGRKER--RVAEEGELTNRHSQGDETVDNTAGSSDTERHIHGQYLQQERAVSHPKARDQVDSVNAEERT----ERDLNILKPEMNAQSDRESSGRISEN--SENSN---RPPKGSSTLTPHSNASLNITVVEERSGMDRIMKTTARYWHGFVSRVKRVVEALKTPKSSPSQTPDNKLKDDFTEXXXXXXXNEIVHDLQRRN----EEDIFSDKNSKHGNRLSTGDTKEHSSGGRKRGSLLMLRTKTLVSPDAVADAVTSAAKRMLSERGDSVSRETSSRFLREVQDKMEELLQPME 540

The following BLAST results are available for this feature:

BLAST of Gvermi9672.t1 vs. uniprot

BLAST of Gvermi9672.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IQP6_9FLOR	1.020e-79	39.83	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 257..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 373..393
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..372
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 327..393
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..245
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 29..560
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..28
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 10..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 24..28
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..9

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24230	contig	ScGOVlb_24230:1742158..1743930 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi9672.t1	Gvermi9672.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24230 1742158..1743930 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi9672.t1 ID=Gvermi9672.t1|Name=Gvermi9672.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=561bp
MFSLMSRRELVIAIFLLLIHVFVRESLGAPVALSKHPRTVAGDEGALTSH
LQDPDESKNQVPYSEHHTQHQSAQPGTYHRGDTDVPTNGPSPKAPNDERG
QTHVAGREIKNFPPVSSGEAVSVSLSTADQMDRQHQQRAHIFPERMIAEN
SVQKDIKEHTASDGSVDPGRRSADQNADLKRQINDRVKAVMKNADKSKRL
SFFSVLHPALAAALSPEKSEEKADIPRPPLSTIDYSSGPLKGTESRDQEA
LRFPAVVQSKQSVLAEMQEKAAELRESEGIEQKEHQFDAQDSQARINEIG
ERFGEEGKALGLVRRDEFQHPAQNYQREKASTGGGIDLNAKEKESQDGEV
DETISSPRAHKGITRLESDKASDNGNTESANIYSSPAHSTNNLTSVLNST
EVDEPSRTGKVLKTTAKYWHGFVNQVKRVVGAFRSAKPASSETTKDQQTD
NFSEDDVQDMVNEVVREIQTRTDGRKQLDLAGGSVAKDGNGEHVAHETGK
GPLLMLRTKTVVSADVVADAVTSTAKKMLSERGDSISHETSSRLLREVQD
KLEELLQPID*