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Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001878 | Zinc finger, CCHC-type | SMART | SM00343 | c2hcfinal6 | coord: 262..278
e-value: 1.5
score: 10.0
coord: 239..255
e-value: 0.0075
score: 24.3 |
| None | No IPR available | GENE3D | 4.10.60.10 | | coord: 223..285
e-value: 9.1E-8
score: 33.8 |
| None | No IPR available | PFAM | PF13650 | Asp_protease_2 | coord: 447..532
e-value: 1.0E-6
score: 29.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 294..309 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 288..309 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 356..371 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 324..385 |
| None | No IPR available | CDD | cd00303 | retropepsin_like | coord: 447..536
e-value: 2.67616E-18
score: 78.1471 |
| IPR021109 | Aspartic peptidase domain superfamily | GENE3D | 2.40.70.10 | Acid Proteases | coord: 439..559
e-value: 2.0E-19
score: 71.6 |
| IPR021109 | Aspartic peptidase domain superfamily | SUPERFAMILY | 50630 | Acid proteases | coord: 446..543 |
| IPR036875 | Zinc finger, CCHC-type superfamily | SUPERFAMILY | 57756 | Retrovirus zinc finger-like domains | coord: 234..279 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi967.t1 ID=Gvermi967.t1|Name=Gvermi967.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=627bp
MAPTWYSRGGSSSDSNAAFTVYDGSSIDVVKFFFYFENVAMRGKTDEDMA
LELLGFLEDKAFEFYYDSYAVNGSLSEEAKDYRSVKQAFINRFGKAEEPE
EDIRLAISAKLDYADLVGSLTYVDNLFLKAGFNAKAKFGLLKKAVMEYAD
LAQFVVFRGADDYDELKVQVKAFDAARKAMGNYVSLSTPPKRIVQKHRSS
EETITHALESKVDKLSEQFAQLSLMVKKTQTDRRDYEKVCSYCRKPGHYA
SQCDSNPHRDTRCTRCEKIGHSEITCWRRIRPEETRKVWDTNEGSKESAS
SLQKGSDPVSIVTENAGNTDVVAITKRSADGEALPKQRRSDDGAPIPPLL
NATGYEERVRRPKVYEQTVKKQKQRKSKKQSLQDHASKYNVLTELANASS
GLTFGQLIRGDADDAKKEIRKLIGRRSNVRRPFVGPVGKQPRRLEAVPVM
IYGTGTEALLDSGAVPNLMSTKLCDRLALEPKHTTKKITVANGQSAVCRG
ILYDIPISFRGVSVPLDFLVIDGPPFDIIVGCPTLESLQACLDLGNQHVK
MHIDGKRVTHGFDYARLKISDREGFQTDSDDFTSYSDAAIDSDFASEDEE
QLVVALTEKNHDETPKRLKETTWFLV* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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