Gvermi9650.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi9650.t1 vs. uniprot
Match: A0A2V3IRQ4_9FLOR (DNA repair protein XRCC2-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRQ4_9FLOR) HSP 1 Score: 308 bits (789), Expect = 3.680e-101 Identity = 156/317 (49.21%), Postives = 223/317 (70.35%), Query Frame = 0
Query: 1 MTDDTILNAISKRLGTYP----STTPDQSLGPIISTGIGILDDVKQHPVRLGSLVDISGVSMSGKTQVLHAITAHVLLKHFGGRGPFVCWFDLNRGLCPNRLRGLM-RKMRDESFDVNCDVNCEDQIDAMTGLRVYYPSSTISMCSSLHALLEYIFTEEGNEVCTVVIDSLGSFHYVDKHSFERADLDTSVRKQSHELILCKVLEQLLLTRKVTVFVSKSCLFGETKLDVPWPFPKAGVPMIPKEFMPDLWKSISSHILLTYHLQTLENGESNG-QRGIIALKYIEPVRSPGRRALVSAAAVVIIDNEGITMDTLHV 311
M+ D + AI+ RLGT+ T D+ ++ TG+ +LD+ + PVRLGSL+D++GVS+SGKTQVLH I A+ LL G GP VCW+DLNRGL PNRLR ++ K R +V E I + GL VY PSST+S+C+S+H L ++ + EG V TV+IDSLGSFHY+DK+ F+ D+S KQS EL+L +VLE +L RKV V+VSKSCLF E KLD+PWPFP+AGVP +PK+FMPDLWK+++SHI+L YH+++ + +NG +RG++A+ Y +P ++ R+ +V +A++ I+N+G+ ++LHV
Sbjct: 1 MSPDPVSRAIAARLGTFAIPRNRLTVDRGAA-VVRTGLAVLDETRDMPVRLGSLIDVTGVSLSGKTQVLHFIAAYALLNRTCGNGPVVCWYDLNRGLDPNRLRQMIISKQRQGGSNVT-----ERDISDLDGLLVYRPSSTLSLCASIHDLKRFL-SAEGAGVQTVIIDSLGSFHYMDKYEFDSGLRDSSTMKQSIELVLARVLEPILSLRKVVVYVSKSCLFDEVKLDIPWPFPRAGVPSMPKDFMPDLWKNLTSHIILMYHIESTSSDYNNGARRGVVAMYYKDPQKNLIRKPVVGSASLATINNDGLFFESLHV 310
BLAST of Gvermi9650.t1 vs. uniprot
Match: R7Q2X9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2X9_CHOCR) HSP 1 Score: 110 bits (275), Expect = 1.290e-25 Identity = 67/162 (41.36%), Postives = 99/162 (61.11%), Query Frame = 0
Query: 158 VCTVVIDSLGSFHYVDKHSFERADL-DTSVRKQSHELILCKVLEQLLLTRKVTVFVSKSCLFGETKLDVPWPFPKAGVPMIPKEFMPDLWKSISSHILLTYHLQTLENGESNGQ----RGIIALKYIEPVRSPGRRALVSAAAVVIIDNEGI--TMDTLHVV 312
V V+ID+LG+FHY+DK +D+ + + ++E +L VL +LL ++KV VF SKS LF E L V WPF +AG+P IP+EFMP W+SIS H +L Y + E++ + RGI++L E S R V+AA+ + ID++GI + +HVV
Sbjct: 35 VRNVIIDALGTFHYLDKFQISTSDVREKAPGSGTNEFVLVNVLRELLKSQKVIVFASKSALFEEEALGVKWPFSQAGIPSIPREFMPSSWRSISLHTVLLYFTADGRSAEAHERIDQRRGIVSLLRNED-NSFIREMTVTAASTIRIDSDGILENENDIHVV 195
BLAST of Gvermi9650.t1 vs. uniprot
Match: UPI000B8CC4E5 (DNA repair protein XRCC2 homolog isoform X1 n=4 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CC4E5) HSP 1 Score: 65.5 bits (158), Expect = 2.260e-8 Identity = 65/265 (24.53%), Postives = 112/265 (42.26%), Query Frame = 0
Query: 37 LDDVKQHPVRLGSLVDISGVSMSGKTQVLHAITAHVLLK------HFGGRGPFV------CWFDLNR-------------GLCPNRLRGLMRKMRDESFDVNCDVNCEDQIDAMTG-------LRVYYPSSTISMCSSLHALLEYIFTEEGNEVCTVVIDSLGSFHYVDKHSFERADLDTSVRKQSHELILCKVLEQ---LLLTRKVTVFVSKSCLFGE--TKLDVPWPFPKAGV------------PMIPKEFMPDLWKSISSH 252
L + + P+R G+++++ G S S KTQ+L+ + + +L H+GG G V C FD+ R G +G + SF+V N + +R Y +S +LH LL+ +EVC ++IDS+GSFH++D+ S + R S + + V+ + LL + V +K+ + G+ + DV F V P +E+MP +W+S+ +H
Sbjct: 36 LPPLHRVPLRTGNVIELVGPSPSAKTQILYQVAINGILPKQWNGIHYGGLGQLVFFLDLDCRFDILRFSHMLKHRIMEANGSSNRASQGNREVDKWSSFEVQKKPNIAYDKELFAFCLRRFLYVRCYDTHEFLSSFKTLHCLLQKERNTHDSEVCLLMIDSIGSFHWMDRASSSLPLGANNRRNLSLQNVFESVVHEIRKLLQLHPLLVITTKATILGDRHSMHDVKLKFASLNVANSRNATNNSQQPWF-REYMPFVWQSLVTH 299
BLAST of Gvermi9650.t1 vs. uniprot
Match: UPI000511508D (DNA repair protein XRCC2 homolog n=2 Tax=Maleae TaxID=721813 RepID=UPI000511508D) HSP 1 Score: 60.1 bits (144), Expect = 1.200e-6 Identity = 55/247 (22.27%), Postives = 111/247 (44.94%), Query Frame = 0
Query: 36 ILDDVKQHPVRLGSLVDISGVSMSGKTQVLHAITAHVLLK------HFGGRGPFVCWFDLNRGLCPNRLRGLMRKMRDESFDVNCDVNCEDQIDAMTG-----LRVYYPSSTISMCSSLHALLEYIFTEEGNEVCTVVIDSLGSFHYVDKHSFERADLDTSVRKQSHELILCKVLEQ---LLLTRKVTVFVSKSCLFG------ETKLDVPWPFPK------AGVPMIP-KEFMPDLWKSISSHILL 255
++ + + P+R+G++V++ G S S KT +L + +L H+GG V + DL+ C + L ++ + N +N ++ + + +R Y ++ ++H L E + ++IDS+GSFH++D+ S D ++ S + + V+++ L L + V +K + G E K + +P + +P +E+MP +W+S +H LL
Sbjct: 28 LIPPLHRVPLRVGNVVELVGPSSSAKTLILIQAAVNCILPKEWNGVHYGGLERLVMFLDLD---CRFDILRLSEVLKLRIMEPNGSMNYDEGLFNLCMRRFLYVRCYDSRQFLATLKTMHYRLRKEKEEHHVSIYLLMIDSIGSFHWIDRGSTFFPLGDEKRKRLSLQSVSDAVVQEIRKLQLVHPMLVIATKEIILGNAYGAYEAKQNTSFPEVSDLRNSTSNTQQLPYREYMPSVWQSFVTHKLL 271
BLAST of Gvermi9650.t1 vs. uniprot
Match: A0A5N5HES0_9ROSA (DNA repair protein XRCC2-like protein n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5HES0_9ROSA) HSP 1 Score: 59.3 bits (142), Expect = 3.700e-6 Identity = 67/296 (22.64%), Postives = 130/296 (43.92%), Query Frame = 0
Query: 36 ILDDVKQHPVRLGSLVDISGVSMSGKTQVLHAITAHVLLK------HFGGRGPFVCWFDLNRGLCPNRLRGLMRKMRDESFDVNCDVNCEDQIDAMTG-----LRVYYPSSTISMCSSLHALLEYIFTEEGNEVCTVVIDSLGSFHYVDKHSFERADLDTSVRK----QSHELILCKVLEQLLLTRKVTVFVSKSCLFG------ETKLDVPWPFPK------AGVPMIP-KEFMPDLWKSISSHILLTY----HLQTLENGESNGQRGIIALKYIEPVRSPGRRALVSAAAVVII 299
++ + + P+R+G++V++ G S S KT +L + +L H+GG V + DL+ C + L ++ + N +N ++ + + +R Y ++ ++H L E + ++IDS+GSFH++D+ S L RK QS + + + +L L + V +K + G E K + +P + +P +E+MP +W+S +H LL HL + ES+ + +++ P S + +V A +VI+
Sbjct: 311 LIPPLHRVPLRVGNVVELVGPSSSAKTLILIQAAVNCILPKEWNGVHYGGLERLVMFLDLD---CRFDVLRLSEMLKLRIMEPNGSMNYDEGLFNLCMRRFLYVRCYDSLQFLATLKTMHYRLRKEKEEHHVSIYLLMIDSIGSFHWIDRGS-TFFPLGGEKRKRLSLQSVSDAVVQEIRKLQLVHPMLVITTKEIILGNAYGAYEAKQNTSFPEVSDLRNSTSNTQQLPYREYMPSVWQSFVTHKLLVRASDDHLPIRHHEESS----LYLSEWLLPSLSFRDKFIVKDAGIVIV 598 The following BLAST results are available for this feature:
BLAST of Gvermi9650.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi9650.t1 ID=Gvermi9650.t1|Name=Gvermi9650.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=314bpback to top |