Gvermi9636.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi9636.t1
Unique NameGvermi9636.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length304
Homology
BLAST of Gvermi9636.t1 vs. uniprot
Match: R7QAY5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAY5_CHOCR)

HSP 1 Score: 216 bits (549), Expect = 9.400e-65
Identity = 125/226 (55.31%), Postives = 149/226 (65.93%), Query Frame = 0
Query:   84 SAGQNEAQPASAPPASFQGDLPVANEARLRLPDLDATSR----RRRRKPLQKAVEEPREEREVMATEA--------VQRLTAAYRAGGAEAQKVINELEKDPDYFLQTGNAKGEYDFASAIIGTGKPNKQGIYVLPYLQSGHLLLLGITLLVALIDYPGFPLTEASDQTRDVLKKGLALAGAFNGVLAGFAYRAAQLRAQPPAFWALKTAFLGNLAFNELRTNAPL 297
            SA   E   AS  P +    LP  +E +LRLPD+ +       RR+RKP  +A+E+ +EER +   EA        ++ LT AYR  G EAQ +I+ELEKDPD+  QTGN +GEYD  SAIIGTG PNKQG+YVLPYLQSGHLLLL +TLL   + YPGFPLTE  D  R  LK GLA+    N  LA  A++ AQ R QP AFWALKTAF GN+AFNELR NAPL
Sbjct:  109 SAADVEISLASDVPTATDVALPQVDEGKLRLPDIGSMGSGRAIRRKRKP--RALEDVKEERSIEVEEARKALPTNTIRELTQAYRKKGKEAQVLIDELEKDPDFMFQTGNPEGEYDLTSAIIGTGSPNKQGVYVLPYLQSGHLLLLLVTLLCTFVYYPGFPLTELEDSLRGYLKVGLAITYTLNAGLAILAFKDAQKRGQPAAFWALKTAFFGNIAFNELRRNAPL 332          
BLAST of Gvermi9636.t1 vs. uniprot
Match: A0A7S0ZF87_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZF87_9RHOD)

HSP 1 Score: 134 bits (337), Expect = 2.110e-33
Identity = 73/157 (46.50%), Postives = 100/157 (63.69%), Query Frame = 0
Query:  148 VQRLTAAYRAGGAEAQKVINELEKDPDYFLQTGNAKGE-YDFASAIIGTGKPNKQGIYVLPYLQSGHLLLLGITLLVALIDYPGFPLTEASDQTRDVLKKGLALAGAFNGVLAGFAYRAAQLRAQPPAFWALKTAFLGNLAFNELRTNAPLVKDAEK 303
            V+RLT  Y+ G  E   ++ ++E +PD+  Q   A+ E YD  + I+G+G+P+K G Y LPYLQSGHLL L I L+   I YPGFPLT+ SD TRD L+K L +  + NGVLA  +   A++R QP +FW LKT   G L+ NEL+T+   V +  K
Sbjct:  173 VRRLTKRYKMGRKE---LMRKIEAEPDFMFQPEVAENETYDLTAGILGSGRPSKSGTYFLPYLQSGHLLGLFIVLIATFIYYPGFPLTQLSDATRDQLQKALFIVFSVNGVLAIASLGEAKIRNQPMSFWFLKTLLFGGLSLNELQTSVKPVNENSK 326          
BLAST of Gvermi9636.t1 vs. uniprot
Match: M2XKJ3_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XKJ3_GALSU)

HSP 1 Score: 133 bits (335), Expect = 6.200e-33
Identity = 68/161 (42.24%), Postives = 101/161 (62.73%), Query Frame = 0
Query:  143 MATEAVQRLTAAYRAGGAEAQKVINELEKDPDYFLQTGNAKGEYDFASAIIGTGKPNKQGIYVLPYLQSGHLLLLGITLLVALIDYPGFPLTEASDQTRDVLKKGLALAGAFNGVLAGFAYRAAQLRAQPPAFWALKTAFLGNLAFNELRTNAPLVKDAEK 303
            +A ++++ LT  ++       + +  LEKDP+Y L+  +    YD+A+A+IG G+ NK+G ++LPYLQSGH++ L + LL   + YPGF LTE  + TR+VL+K LA+  + NG+LAG+A   A+ R QP   W +K   LG LA NEL+ N PL     K
Sbjct:  181 IAEDSIKSLTENFKK---RRDQFVQNLEKDPNYGLKRIDEDDSYDWAAALIGRGRANKKGFFLLPYLQSGHIVCLVVVLLCTFVYYPGFYLTELPESTREVLRKSLAIVFSVNGILAGYAGWEAKRRNQPIVLWIIKCMLLGGLALNELQQNVPLTMKTPK 338          
BLAST of Gvermi9636.t1 vs. uniprot
Match: A0A7S0BHH3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BHH3_9RHOD)

HSP 1 Score: 109 bits (272), Expect = 3.250e-26
Identity = 54/108 (50.00%), Postives = 72/108 (66.67%), Query Frame = 0
Query:  193 IGTGKPNKQGIYVLPYLQSGHLLLLGITLLVALIDYPGFPLTEASDQTRDVLKKGLALAGAFNGVLAGFAYRAAQLRAQPPAFWALKTAFLGNLAFNELRTNAPLVKD 300
            +G G  +++  Y+LPYLQ+GH++ LG+ LL A I YPGFPLT+ S++ R+ L++GL +  AFN VLA   Y   Q R QP  FW  K   LG LAFNELR N P++ D
Sbjct:    2 LGRGSKSEEFGYILPYLQTGHMVGLGVVLLTANIYYPGFPLTQLSEEVREGLRRGLLIIYAFNAVLAVLTYFECQKRRQPWTFWVPKVLLLGGLAFNELRDNLPVIAD 109          
BLAST of Gvermi9636.t1 vs. uniprot
Match: A0A5J4Z3V4_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3V4_PORPP)

HSP 1 Score: 112 bits (280), Expect = 1.070e-24
Identity = 69/161 (42.86%), Postives = 91/161 (56.52%), Query Frame = 0
Query:  144 ATEAVQRLTAAYRAGGAEAQKVINELEKDPDYFLQTGNAKGE-YDFASAIIGTGKPNKQG----IYVLPYLQSGHLLLLGITLLVALIDYPGFPLTEASDQTRDVLKKGLALAGAFNGVLAGFAYRAAQLRAQPPAFWALKTAFLGNLAFNELRTNAPLVK 299
            A + V+RLT  ++    E   ++ ++E DPD+  Q   AK + YD  +AIIG G+P + G    +Y+LPYLQ+GHL+ L   LL+     PG PLT   D+ R  L +GL +    N  L     R A LR QP AFWALK   LG LA NEL+TN   VK
Sbjct:  174 ADDPVKRLTRRFKMSRDE---LMMKVEADPDFMFQAEIAKDDTYDMTAAIIGAGQPREVGGGNTVYILPYLQNGHLIGLLTILLMTFAYNPGLPLTNLPDEFRGALARGLLVTFVVNSCLVLAVPREAALRRQPTAFWALKVFLLGGLALNELQTNIRPVK 331          
BLAST of Gvermi9636.t1 vs. uniprot
Match: A0A8J5XSB9_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XSB9_DIALT)

HSP 1 Score: 83.6 bits (205), Expect = 1.520e-14
Identity = 49/118 (41.53%), Postives = 67/118 (56.78%), Query Frame = 0
Query:  179 TGNAKGEYDFASAIIGTGKPNKQGIYVL-PYLQSGHLLLLGITLLVALIDYPGFPLTEASDQTRDVLKKGLALAGAFNGVLAGFAYRAAQLRAQPPAFWALKTAFLGNLAFNELRTNA 295
            +  A  EYD  SA++G G+  + G + L PYLQSGHL+LL ++LL A    P FPLT+   + R++LK  LA+  A N   A +A  AA  R     FW  K   LG +A +EL + A
Sbjct:  250 SAGASEEYDIISALLGEGQRTEAGNFFLGPYLQSGHLILLSVSLLSAFAYSPNFPLTDLPAEYRELLKLALAVTLAVNTGTAAYAATAASARGLSAPFWVAKCLLLGGVALSELTSIA 367          
BLAST of Gvermi9636.t1 vs. uniprot
Match: A0A7S3L7U9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L7U9_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 2.940e-12
Identity = 48/118 (40.68%), Postives = 63/118 (53.39%), Query Frame = 0
Query:  186 YDFASAIIGTGKPNKQGIYVLPYLQSGHLLLLGITLLVALIDYPGFPLTEASDQTRDVLKKGLALAGAFNGVLAGFAYRAAQLRAQPPAFWALKTAFLGNLAFNELRTNAPLVKDAEK 303
            Y   SA++G       GI   P LQ GHL+     +L+A ++YPGFPLT      RD L  GL    A N VLAG +   AQ R QP  FW  KT  +G LA+++L T  P  ++ +K
Sbjct:  145 YGTVSALLGERAKPFLGIPTGP-LQVGHLIGTLAIMLMAFVEYPGFPLTNLPTPIRDALAGGLGTVYAINAVLAGVSIFKAQERGQPVPFWMAKTFTVGGLAYDQL-TQLPTTEELQK 260          
BLAST of Gvermi9636.t1 vs. uniprot
Match: A0A448ZGR7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGR7_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 5.400e-11
Identity = 71/226 (31.42%), Postives = 105/226 (46.46%), Query Frame = 0
Query:   82 DASAGQNEAQPASAPPASFQGDLPVANEARLRLPDLDATSRRRRRKPLQKAVEEPREEREVMATEAVQRLTAAYRAGGAEAQKVINELEKDP-----DYFLQTGNAKGEYDFASAIIGTGKPNKQGIYVLPYLQSGHLLLLGITLLVALIDYPGFPLTEASDQTRDVLKKGLALAGAFNGVLAGFAYRAAQLRAQPPAFWALKTAFLGNLAFNELRTNAPLVKDAE 302
            DA+  Q   +  +APPA     +   + + + LPD+  T RR++ + +QK     ++E  +M    + R          + Q ++  LE+DP     D F Q    + EY   SA++G       GI + P LQ GH +   + +L+A I+YPGFPLT      RD L+ GL      N +LA  A   A  R QP   W  KT  +G LA ++L T  P     E
Sbjct:  141 DAAPQQIPEEAVAAPPAELSSPVQEVDGS-IPLPDIKDTMRRKQAE-VQKGP--AKDEDSIMPKTKIDR---------GDRQALLKLLEQDPYADGDDSFFQ----EEEYTTVSALLGERAKPFLGIPIGP-LQVGHTIGALVIILMAFIEYPGFPLTNLPTPIRDALQGGLGTIYGINALLAVVASFKAGERGQPAPLWMAKTFTVGGLALDQL-TQLPTTAQIE 347          
BLAST of Gvermi9636.t1 vs. uniprot
Match: K0S8C4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S8C4_THAOC)

HSP 1 Score: 73.2 bits (178), Expect = 9.830e-11
Identity = 54/154 (35.06%), Postives = 73/154 (47.40%), Query Frame = 0
Query:  170 EKDPDYFLQTGNAKGEYDFASAIIGTGKP----------NKQGIYVLPY----------LQSGHLLLLGITLLVALIDYPGFPLTEASDQTRDVLKKGLALAGAFNGVLAGFAYRAAQLRAQPPAFWALKTAFLGNLAFNELRTNAPLVKDAEK 303
            ++D  YF + G      DF SA++G  +P          NK G  VL            LQ GH       +L+A ++YPGFPLT   D  R  L+ GLA   A N VLA  A+ +A  R Q PA W  KT  +G +A+++L       + AEK
Sbjct:   97 DEDSSYFEEEG-----VDFISALLGDVEPGVGTESDENTNKSGKRVLKKTSFLGIGSGPLQVGHFFGALSAVLMAFVEYPGFPLTNLPDPLRGALQGGLATVYAINAVLAVLAFLSASERNQSPALWGAKTFAVGAIAYDQLMQIPTPGEAAEK 245          
BLAST of Gvermi9636.t1 vs. uniprot
Match: A0A7S2III6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2III6_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.230e-10
Identity = 70/203 (34.48%), Postives = 99/203 (48.77%), Query Frame = 0
Query:  104 LPVANEARLRLPDL-DATSRRRRRKPLQKAVEEPREEREVMATEAVQRLTAAYRAGGAEAQKVINELEKDPDYFLQTGN-AKGEYDFASAIIGTGKPNKQGIYVLPYLQSGHLLL-LGITLLVALIDYPGFPLTEASDQTRDVLKKGLALAGAFNGVLAGFAYRAAQLRAQPPAFWALKTAFLGNLAFNELRTNAPLVKDAEK 303
            L  + E  L LP++ DA +++R+RK  ++A E  R ER               R   ++   +   LE DP       N  + EY   SA++  G     GI     LQ GH +L LGI +L+A ++YPGFPLT      R+ L+ GL      N VLA  A   A  R QPPA WA K+  +G LAF++L T  P  ++  +
Sbjct:  149 LVSSREKALDLPNIRDAMAQKRQRKK-EEAFEAERMERR--------------RISRSDKDAMARLLEMDPLADDDKRNFEEEEYTTVSALLAEGAKPFLGI-TSGQLQVGHFILSLGI-ILMAYVEYPGFPLTNLPTPLRECLQSGLGTVYVVNTVLAILAVFKAMERDQPPALWAAKSFSVGGLAFDQL-TQLPTKEEMRR 333          
The following BLAST results are available for this feature:
BLAST of Gvermi9636.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
R7QAY5_CHOCR9.400e-6555.31Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZF87_9RHOD2.110e-3346.50Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M2XKJ3_GALSU6.200e-3342.24Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S0BHH3_9RHOD3.250e-2650.00Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z3V4_PORPP1.070e-2442.86Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A8J5XSB9_DIALT1.520e-1441.53Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S3L7U9_9STRA2.940e-1240.68Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A448ZGR7_9STRA5.400e-1131.42Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
K0S8C4_THAOC9.830e-1135.06Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2III6_9STRA1.230e-1034.48Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..138
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 229..247
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 267..303
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 205..228
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..204
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 248..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24230contigScGOVlb_24230:1528210..1529121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi9636.t1Gvermi9636.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24230 1528210..1529121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi9636.t1 ID=Gvermi9636.t1|Name=Gvermi9636.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=304bp
MRSPRAAPPRAAFAPPLHLAARPVVRPLRSRPHPQSPPPPPPPSPPPPPA
ARPPIVCAKKRSNRRRKRPEPPPSKPAPSSSDASAGQNEAQPASAPPASF
QGDLPVANEARLRLPDLDATSRRRRRKPLQKAVEEPREEREVMATEAVQR
LTAAYRAGGAEAQKVINELEKDPDYFLQTGNAKGEYDFASAIIGTGKPNK
QGIYVLPYLQSGHLLLLGITLLVALIDYPGFPLTEASDQTRDVLKKGLAL
AGAFNGVLAGFAYRAAQLRAQPPAFWALKTAFLGNLAFNELRTNAPLVKD
AEK*
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