Gvermi9593.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi9593.t1
Unique NameGvermi9593.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length171
Homology
BLAST of Gvermi9593.t1 vs. uniprot
Match: A0A2V3IQQ4_9FLOR (Mitotic spindle-associated MMXD complex subunit MIP18 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQQ4_9FLOR)

HSP 1 Score: 234 bits (598), Expect = 1.070e-76
Identity = 111/156 (71.15%), Postives = 134/156 (85.90%), Query Frame = 0
Query:   15 DNPNPKVKVLDREARDPRKPLTLKEHVFEVIRDIRDPEYPHSLEELDVVKLEYIDIRKPPSDSPGYGSVSVQFHPTVPHCSLASMIGLSICSKLKESKILEPRGEQYYKLKVTCIEGTHTNSRDINKQLADKERVSAAFENPRIMSLLRECTENLP 170
            DNPNP+VKVL RE R+P KPLTL++ VFE+IRDIRDPE+PHSLEEL VV L  I+I  PP DSPG+G + V F PTVPHCSLAS+IGLSI SK++ES IL P+GE YYKLKVTC++GTHT++ +INKQL DKERVSAAFENP+I+ +LRECT++LP
Sbjct:    5 DNPNPEVKVLSRERREPGKPLTLQQRVFEIIRDIRDPEHPHSLEELSVVDLNCINITNPPDDSPGHGKIWVSFTPTVPHCSLASIIGLSIQSKIRESGILNPKGEHYYKLKVTCVDGTHTSAGEINKQLGDKERVSAAFENPKILKVLRECTDHLP 160          
BLAST of Gvermi9593.t1 vs. uniprot
Match: A0A0V0G594_TRIDM (FeS_assembly_P domain-containing protein (Fragment) n=3 Tax=Triatominae TaxID=70999 RepID=A0A0V0G594_TRIDM)

HSP 1 Score: 117 bits (294), Expect = 7.070e-31
Identity = 64/131 (48.85%), Postives = 92/131 (70.23%), Query Frame = 0
Query:   38 KEHVFEVIRDIRDPEYPHSLEELDVVKLEYIDIRKPPSDSPGYGSVSVQFHPTVPHCSLASMIGLSICSKLKESKILEPRGEQYYKLKVTCIEGTHTNSRDINKQLADKERVSAAFENPRIMSLLRECTEN 168
            KE VF+++R IRDPE P +LEELDVV  E I+I +   DS  Y  VS++F PTV HC+LA++IGL I  KL+++ + +      YKLKVT  +GTH    D+NKQ+ DKERV+AA ENP ++ ++++C ++
Sbjct:   11 KETVFDLVRSIRDPEKPATLEELDVVSEEGIEICRNWDDSIFY--VSLEFQPTVAHCNLATLIGLCIRVKLQKNLVHK------YKLKVTVKKGTHQTEEDVNKQINDKERVAAALENPSLLEMVQKCIKD 133          
BLAST of Gvermi9593.t1 vs. uniprot
Match: A0A224XM54_9HEMI (FeS_assembly_P domain-containing protein n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XM54_9HEMI)

HSP 1 Score: 116 bits (291), Expect = 5.730e-30
Identity = 63/131 (48.09%), Postives = 92/131 (70.23%), Query Frame = 0
Query:   38 KEHVFEVIRDIRDPEYPHSLEELDVVKLEYIDIRKPPSDSPGYGSVSVQFHPTVPHCSLASMIGLSICSKLKESKILEPRGEQYYKLKVTCIEGTHTNSRDINKQLADKERVSAAFENPRIMSLLRECTEN 168
            KE VF+++R IRDPE P +LE+LDVV  E I+I +   DS  Y  VS++F PTV HC+LA++IGL I  KL+++ + +      YKLKVT  +GTH    D+NKQ+ DKERV+AA ENP ++ ++++C ++
Sbjct:   48 KETVFDLVRSIRDPEKPATLEDLDVVSEEGIEICRNWDDSIFY--VSLEFQPTVAHCNLATLIGLCIRVKLQKNLVHK------YKLKVTVKKGTHQTEEDVNKQINDKERVAAALENPSLLEMVQKCIKD 170          
BLAST of Gvermi9593.t1 vs. uniprot
Match: A0A0R3W383_TAEAS (FeS_assembly_P domain-containing protein n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A0R3W383_TAEAS)

HSP 1 Score: 115 bits (287), Expect = 1.390e-29
Identity = 70/134 (52.24%), Postives = 90/134 (67.16%), Query Frame = 0
Query:   32 RKPLTLKEHVFEVIRDIRDPEYPHSLEELDVVKLEYIDIRKPPSDSPGYGSVSVQFHPTVPHCSLASMIGLSICSKLKESKILEPRGEQYYKLKVTCIEGTHTNSRDINKQLADKERVSAAFENPRIMSLLREC 165
            R+P+T  E VFE IRDIRDPE+P++LE L VV+ E I +     D  G  +VSVQF PT+PHCS+A++IGLSI  KL  S    PR    +K++VT   G H +  DINKQLADKERV+AA ENP +   + +C
Sbjct:   31 REPITPAE-VFEHIRDIRDPEHPYTLEVLGVVRKEDIAV-----DDAG-STVSVQFTPTIPHCSMATLIGLSIKVKLLRSL---PRR---FKIRVTIAPGMHDSEADINKQLADKERVAAAMENPALARAVNQC 151          
BLAST of Gvermi9593.t1 vs. uniprot
Match: A0A0R3UA17_MESCO (FeS_assembly_P domain-containing protein n=1 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3UA17_MESCO)

HSP 1 Score: 114 bits (285), Expect = 2.940e-29
Identity = 66/134 (49.25%), Postives = 90/134 (67.16%), Query Frame = 0
Query:   32 RKPLTLKEHVFEVIRDIRDPEYPHSLEELDVVKLEYIDIRKPPSDSPGYGSVSVQFHPTVPHCSLASMIGLSICSKLKESKILEPRGEQYYKLKVTCIEGTHTNSRDINKQLADKERVSAAFENPRIMSLLREC 165
            R+P+T  E VFE IRDIRDPE+PH+LE L VV+ ++I +     D  G  +VSV   PT+PHC++A++IGLS+  KL+ S    PR    +K+ V    G+H    DINKQLADKERV+AA ENP +M ++ +C
Sbjct:   31 REPITAAE-VFEHIRDIRDPEHPHTLEALGVVQEDHITV-----DDAG-SAVSVLITPTIPHCTMATLIGLSVKIKLQRSL---PRR---FKVSVVIAPGSHNTEDDINKQLADKERVAAAMENPTLMRMVNDC 151          
BLAST of Gvermi9593.t1 vs. uniprot
Match: UPI001CF5A73E (cytosolic iron-sulfur assembly component 2A-like isoform X1 n=4 Tax=Acropora TaxID=6127 RepID=UPI001CF5A73E)

HSP 1 Score: 113 bits (283), Expect = 4.190e-29
Identity = 60/144 (41.67%), Postives = 90/144 (62.50%), Query Frame = 0
Query:   22 KVLDREARDPRKPLTLKEHVFEVIRDIRDPEYPHSLEELDVVKLEYIDIRKPPSDSPGYGSVSVQFHPTVPHCSLASMIGLSICSKLKESKILEPRGEQYYKLKVTCIEGTHTNSRDINKQLADKERVSAAFENPRIMSLLREC 165
            K+L   A      L L + VF++++DIRDPE P +LEEL V++ E+I I K  +D      + ++F PTVPHCSLA++IGL +  KL+ S   +      +KL ++   GTH+   +INKQ+ DKER++AA ENP +  ++ EC
Sbjct:    5 KILSTAADSSFDNLVLVQEVFDIVKDIRDPELPQTLEELHVIEEEFIKIDKIGNDDY---IIKIEFTPTVPHCSLATLIGLCLRVKLERSLPYK------FKLDISLSRGTHSTENEINKQINDKERIAAAMENPNLKKIVEEC 139          
BLAST of Gvermi9593.t1 vs. uniprot
Match: UPI001EE55260 (cytosolic iron-sulfur assembly component 2A-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE55260)

HSP 1 Score: 114 bits (285), Expect = 4.710e-29
Identity = 66/159 (41.51%), Postives = 99/159 (62.26%), Query Frame = 0
Query:   15 DNPNPKVKVLDRE---ARDPRKPLTLK---EHVFEVIRDIRDPEYPHSLEELDVVKLEYIDIRKPPSDSPGYGSVSVQFHPTVPHCSLASMIGLSICSKLKESKILEPRGEQYYKLKVTCIEGTHTNSRDINKQLADKERVSAAFENPRIMSLLRECTE 167
            +N +P  K  + E   A DP +   LK   E ++++IRD+RDPE P +LEEL+V+  E + + +      G   V + F PTVPHCSLAS+IGLS+ +KL++         + +KL +   EGTH+ + +INKQ+ DKER++AA ENP +  L+ +CTE
Sbjct:   18 ENNSPPEKACNDENTTASDPERERELKILEETIYDIIRDVRDPEKPETLEELNVISEEGVHVSRL---QDGQLLVKLTFVPTVPHCSLASLIGLSLRTKLEKCL------PEQHKLDIFIKEGTHSTADEINKQINDKERIAAAMENPNLRELISKCTE 167          
BLAST of Gvermi9593.t1 vs. uniprot
Match: A0A068YFA9_ECHMU (FeS_assembly_P domain-containing protein n=2 Tax=Echinococcus TaxID=6209 RepID=A0A068YFA9_ECHMU)

HSP 1 Score: 113 bits (283), Expect = 5.560e-29
Identity = 67/134 (50.00%), Postives = 87/134 (64.93%), Query Frame = 0
Query:   32 RKPLTLKEHVFEVIRDIRDPEYPHSLEELDVVKLEYIDIRKPPSDSPGYGSVSVQFHPTVPHCSLASMIGLSICSKLKESKILEPRGEQYYKLKVTCIEGTHTNSRDINKQLADKERVSAAFENPRIMSLLREC 165
            R+P+T  E +FE IRDIRDPE+P++LE L VV+ E I +    S      +VS+QF PT+PHCS+A++IGLSI  KL  S    PR    +K+ VT   G H    DINKQLADKERV+AA ENP +   + +C
Sbjct:   31 REPITAAE-IFEHIRDIRDPEHPYTLEALGVVRREEIAVDDAAS------TVSLQFTPTIPHCSMATLIGLSIKVKLLRSL---PRR---FKIHVTIASGMHETEADINKQLADKERVAAAMENPALAQAVNQC 151          
BLAST of Gvermi9593.t1 vs. uniprot
Match: A0A150G9L7_GONPE (FeS_assembly_P domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G9L7_GONPE)

HSP 1 Score: 113 bits (283), Expect = 6.390e-29
Identity = 68/156 (43.59%), Postives = 99/156 (63.46%), Query Frame = 0
Query:   16 NPNPKVKVL------DREARDPRKPLTLKEHVFEVIRDIRDPEYPHSLEELDVVKLEYIDIRKPPSDSPGYGSVSVQFHPTVPHCSLASMIGLSICSKLKESKILEPRGEQYYKLKVTCIEGTHTNSRDINKQLADKERVSAAFENPRIMSLLREC 165
            NPNP V+        +  A   R+P+   E +F+ IRDI DPE+P++LE+L+VV  E+IDI          G VSVQF PTV HCS+A++IGLS+  KL  S  L PR    +K+ +    G+H++   +NKQL+DKERV+AA ENP +++++ +C
Sbjct:    6 NPNPIVRERRATTRSEPRAEGGREPIDALE-IFDHIRDINDPEHPYTLEQLNVVSEEHIDI------DDTRGRVSVQFTPTVAHCSMATLIGLSLRVKLLRS--LPPR----FKVDIKLAPGSHSSEAAVNKQLSDKERVAAALENPNLLAMVNKC 148          
BLAST of Gvermi9593.t1 vs. uniprot
Match: R0KT06_NOSB1 (FeS_assembly_P domain-containing protein n=1 Tax=Nosema bombycis (strain CQ1 / CVCC 102059) TaxID=578461 RepID=R0KT06_NOSB1)

HSP 1 Score: 113 bits (282), Expect = 1.370e-28
Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = 0
Query:   41 VFEVIRDIRDPEYPHSLEELDVVKLEYIDIRKPPSDSPGYGS------VSVQFHPTVPHCSLASMIGLSICSKLKESKILEPRGEQYYKLKVTCIEGTHTNSRDINKQLADKERVSAAFENPRIMSLLRECT 166
            VFE+IRDI+DPE+P ++EELDV++ EY+ I +      G         +S+ F PT+PHCS+A +IGLSI       K+L  R  + +K+ V  IEGTH+N   I+KQL DK+RV AA EN  +M ++RECT
Sbjct:   32 VFELIRDIKDPEHPLTIEELDVIRREYVKITRIEYTGIGINVGYPINIISIVFKPTIPHCSMAGIIGLSI-------KLLLERFIKGFKIDVRVIEGTHSNWEAISKQLNDKDRVMAASENESLMGIIRECT 156          
The following BLAST results are available for this feature:
BLAST of Gvermi9593.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQQ4_9FLOR1.070e-7671.15Mitotic spindle-associated MMXD complex subunit MI... [more]
A0A0V0G594_TRIDM7.070e-3148.85FeS_assembly_P domain-containing protein (Fragment... [more]
A0A224XM54_9HEMI5.730e-3048.09FeS_assembly_P domain-containing protein n=1 Tax=P... [more]
A0A0R3W383_TAEAS1.390e-2952.24FeS_assembly_P domain-containing protein n=1 Tax=T... [more]
A0A0R3UA17_MESCO2.940e-2949.25FeS_assembly_P domain-containing protein n=1 Tax=M... [more]
UPI001CF5A73E4.190e-2941.67cytosolic iron-sulfur assembly component 2A-like i... [more]
UPI001EE552604.710e-2941.51cytosolic iron-sulfur assembly component 2A-like n... [more]
A0A068YFA9_ECHMU5.560e-2950.00FeS_assembly_P domain-containing protein n=2 Tax=E... [more]
A0A150G9L7_GONPE6.390e-2943.59FeS_assembly_P domain-containing protein n=1 Tax=G... [more]
R0KT06_NOSB11.370e-2846.97FeS_assembly_P domain-containing protein n=1 Tax=N... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002744MIP18 family-likePFAMPF01883FeS_assembly_Pcoord: 38..110
e-value: 3.7E-9
score: 36.6
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 36..134
e-value: 2.1E-26
score: 93.6
IPR034904Fe-S cluster assembly domain superfamilySUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 37..110
NoneNo IPR availableGENE3D6.10.250.1280coord: 136..166
e-value: 7.7E-13
score: 49.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 5..29
NoneNo IPR availablePANTHERPTHR12377:SF2CYTOSOLIC IRON-SULFUR ASSEMBLY COMPONENT 2Acoord: 38..166
IPR039796MIP18 familyPANTHERPTHR12377UNCHARACTERIZEDcoord: 38..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24230contigScGOVlb_24230:1391217..1391729 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi9593.t1Gvermi9593.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24230 1391217..1391729 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi9593.t1 ID=Gvermi9593.t1|Name=Gvermi9593.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=171bp
MSAAHVSISHNITPDNPNPKVKVLDREARDPRKPLTLKEHVFEVIRDIRD
PEYPHSLEELDVVKLEYIDIRKPPSDSPGYGSVSVQFHPTVPHCSLASMI
GLSICSKLKESKILEPRGEQYYKLKVTCIEGTHTNSRDINKQLADKERVS
AAFENPRIMSLLRECTENLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002744MIP18-like
IPR034904FSCA_dom_sf
IPR039796MIP18