Gvermi9567.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi9567.t1
Unique NameGvermi9567.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1880
Homology
BLAST of Gvermi9567.t1 vs. uniprot
Match: A0A2V3ISU4_9FLOR (B-block_TFIIIC domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISU4_9FLOR)

HSP 1 Score: 1504 bits (3893), Expect = 0.000e+0
Identity = 887/1885 (47.06%), Postives = 1190/1885 (63.13%), Query Frame = 0
Query:    1 MDELFAKVVDHIALGGREGSSLLASLTAVQGKSPRPGVLHFLHRQFVTRGERFCAKPSFAAPAEEVIIIAHEAIRQRALGFSPLEQPPLPRQGLQILERVGMARSDGILQSEIGQYVGLAPNMVHHYLGGLIARSLVARKKVVLTKRRAKGGIKHQPTESSLSQPEQLKPYGTTANKSVTYTAVVVLIRFAPVISQSSASRPVVTLNGSENPEITSSSAAAEQTQDPTRAQSVIDLTMETRVYRAMQALRPEPHIRSEKDLKVIAMPDSDRAQGVSEEYFRRRRHRCYRALRAKLERAGLVEVVHRECRARNGKAVGNQACLKLTELGIQKLRKRKDGRLLAEDFDASQSSKKRDAHPLLRDGIHTRLVEEVGVMEQVYQLLRKAEKGGISIPEMEQYLDGETKLTGLPGKRIRRLVDEIAKFDPITESQRFEGSAMYLRIALSSFV----SSEKLNDPNDRASDQGNK-PGNRGSKRRKAGITSLGHRRQQIVLKLLEERKVILLEPLGREVAVLEDSGLQRVDPKVMRRLLNDLISREKIKLITAMKPAIKESKRNQTVTIVALPDIAEGSQDVRNLVTSVVNRTLYGPSSNAAAVSCKSRTNEHPYPQASRKRLSGAGLDIVSCEGGEDTLQEECGTEEVVEQELSRLNGTGKTEEINKSDEHARAGVNEEEAIEEVIKTSAQEYTEFDGNCSSIVISGERTICDKTNAGDDGTNPPIDKNEPPNGSRETN-SEPQHVLNESRTGSDSGKPADLNSA-PVDNMTMSSIAEVDSCSMPTEEQSPCGKIKGDEDEDNDDYVV-SDIVGKKITRINKLRAIDYGLLKGKMARVRAFHKTIYIQMRHNQDSVPVDQPVAHHTVDSAMDAPVLGRFTMSNVVANMTVGEYATAIGFYQNHGDLVLSFKDEKISNVQGQLEEEVQGQTSARQILNLVQTLTRLGLVESGGDSQWALSGSGLIRDFGKGMPSGVVPHGIIFTSMKAVDTYWRELEQFARCRMSRRPMHVE-TEGVEEDMIPSNDIEMRF--VSDIYFPTRWASGVVRLQKKDQLIYESMLQLLSGVQLELNLPNSLITTSFKDHPLKHFSVEELEEAFERYKDKIPSLRATQRSMPSHEKLLLYSRYRTKNPIPQWIRERENKIRRQPSAQENVENEFVGDHTCILHLSSKESVVEGLHFRAGITSLGKRPSFSSIMKTRNAIQGPVKVSKKDSTQCASSSIGKDEEKGEDGRTEKDKKNLIARGTSHGEHKDRVTDGMAVDAQRMVHVSKAVIKSRATAYFCNNSQALEWKGVSSMVNWYVRRLYKEELNNDPEMVTVVRLLINAMVKFCDMSMVRAALDTLALKLVILGRFCGEMALPENNKNSSRLGSPQCMEKFVTEWQELDHILFALIILQSHDLKYSGNVILSEETLKGFTDQESAKRVIQKEFQLDGLIYGREELLSHMLEVMASRFRRVADMHLRENVSHGMLVRCISETETALRERASCCTNYMLRPSALVSQSSNMSTKTAIDKDCEFKTMDIMGKLGPGNEATKADQAEQAHQPTNKSGETHHISVEKTAEGIKSSCGSAKYRRELIEMVVQVVGREQYHMQDSVQSRRLLDKFCWSDIASARDRLLLRGALTYRAERDSGNGFFTATRNVGGNDYLSM-LRDEGEVSKGWMSELCSEEA-EVRWETSKFRDAVCDIGEASVSSIATNLLTKKMFFENDGLSMMARMSGSGSSKEPIQLFIGRAQNDWTWAVRKK-----RRIAVRSELKTEIRRRIVCAIGESRHQGRLLTELLEVVKPRSDEDRAAVVWGLHGLLQDGCVRRFVVEQGDVPEEKFAAWHGVLYLGRAYCEDLELQQDSVGKNGTRVAWWRNTNGQCDTQLVGGMRDCILNCLTETP 1867
            MD+LFA+VVDHIAL G  G+SLL SLTAV G+ PR G++ +LHRQF  R +RF AKPSF APA EV + AH+ IRQRALGF+PLEQ PLP     +LER+GMA S+GILQSE+G+YVGLAPNMVHHYLG L+ARSLVARKKVVLTK+R     K Q T+  ++  E L   G     SVTYTAVVVL R+A  ISQS+AS+ +   +     E  S  + ++Q    + A SVIDLTMETR+ R M AL+P PH RSEKDLKVIAMPDSD+ + +S+E FRRRRHR YRALR+KL RAGLVE+V REC AR+GK +GN ACLKLT LG++KL+   + +L +ED  A Q S  R  HPLL+DG   R +EEVG++EQVYQL++++ K GISIPE+ +YLDG T LTG  GKRIRR+VD I++ +P  E+QRFEGSAMY+RIAL S       S  L  PN ++  Q  + PG++G KRRK GIT+LG +RQ+IV+KLLE RKV++LE LGREVA +ED+GL RVD KVMRRLLNDLI +  IKLITA+KPAIK+ KR+QTVT+VALP++AE  Q+VR+++TSVVNR LYG S+  A++    R +E      S K     G   V                     +L  +N  G    I   D   R+ +++E       K +  +    D +    ++  E  I     AGD        K    N  + T   E      E +    S K  D+     +D  T +         +    +S      G +D+      V SD   K+  RINKLR+IDYGLLKGK+ARVR FH+TI+  ++ ++ S   ++P+ HH+V+    A  LG F +   +++MTV EYA  IGFYQ+HGDL+ S K+E+I+N++ QL++E+  QT+ARQIL+LVQ LTRLGLVES  DSQW L+G G+IRDFGKG+PSGVVPHGI+F+ MKAVDT+WRELEQFARCRMSR+P + + T   EE     ++ E +   V+D+Y+P RW++GVVRLQK+DQL+YE++LQ  +GV++ELNLPN+L+TT+F + PL+ FS+EELEEAF  Y +KIPSL+ATQRS PSHEKLL+YSRYRTKNP+P WIRERE K++RQ    E VE+EF GD++CILHLSS+ S VEG   R GI  LGKRPS  +  K  N  +   K+ KK S Q  +                         GT+        +D   V+ QRMV V KA++KSRA AY+C NS+ALEWKG  +M+NW+VR+ YK+++  D  ++ V+  L  AMV FCDM +VR  LD ++LK+VI GR CG M + E +   S+    + M+  V  W  L+ ++ ALI L   DLKYSG + ++    +      +AK++I++E +++GL +GRE  L H LE MA RF+R+AD+ LRENVSHG+L  C+S    A+R+R  CCT  + +      Q  N+  +    +D   K   + G          A Q E+              +V    +G +  CG  ++R E++++VV  +GR++ H QD  +SR LL++FCWSDIA ARDRLLLRGAL YR ++  G G F  T+    +D   + L D+G+ ++ W  EL +     V WE SK + +VCD GE SVSSIA   LT+K+ F  DGL M   M+ SG+S E +QL +  +  +   +  ++      RI V + L++ ++ R+   I      G+ L ELL  V+PR+DE+RAA+V  LHGL+ DG VRRF VE+  + +E+FAAW GVLY+   +   L     S+G     + WWR+  G  D + + G+R  +L  LT  P
Sbjct:    1 MDQLFAQVVDHIALSGSAGASLLDSLTAVLGRQPRRGLVIYLHRQFAARSDRFFAKPSFNAPAHEVRLTAHDNIRQRALGFTPLEQSPLPSHAYNVLERIGMAGSNGILQSELGKYVGLAPNMVHHYLGVLMARSLVARKKVVLTKQRTVIK-KEQLTDQPVTNQETLTS-GDGLGPSVTYTAVVVLARYALNISQSTASKSLAPPHDQPQTE-PSPESTSQQPSKASSAPSVIDLTMETRIERIMLALQPSPHTRSEKDLKVIAMPDSDKQEHISDELFRRRRHRGYRALRSKLVRAGLVEIVQRECIARDGKHLGNHACLKLTSLGLEKLQGGLNSKLRSEDLSAHQRSAHRKVHPLLQDGTRARFLEEVGLVEQVYQLIKRSGKEGISIPEIHEYLDGGTDLTGAVGKRIRRIVDSISRIEPTIETQRFEGSAMYIRIALRSIACPEGESNDLQQPNSQSLSQHERTPGSQGKKRRKVGITTLGQQRQEIVMKLLESRKVVILETLGREVATVEDAGLHRVDQKVMRRLLNDLIKQNAIKLITAVKPAIKDCKRSQTVTLVALPEVAENGQEVRSIMTSVVNRALYG-STEGASIEADKRNSE------SMKEEPSNGKSYV---------------------DLKNVNRNGDAA-IPIPD---RSRLSQERNAVHPKKPAPDD----DQDNGPPIVVYEHNIPKGKTAGDSNAQVNCRKRSSSNDKKRTKLKESSKTAEEDKLKPPSSKVRDVTGEMAIDTQTTTIDDNAKPTPLSASNKSARHSKGGSKDKGGAAVCVESDGRDKRKLRINKLRSIDYGLLKGKLARVRVFHRTIFGMLQPDRASRESEKPIPHHSVEDVFQAENLGCFKVGECLSSMTVSEYAAVIGFYQDHGDLITSRKEERIANIRDQLDQEINSQTAARQILSLVQMLTRLGLVESNADSQWTLAGQGIIRDFGKGLPSGVVPHGIVFSDMKAVDTFWRELEQFARCRMSRKPPNSDMTPNPEEGTSADSEGERKMLPVTDVYYPNRWSTGVVRLQKRDQLLYEAILQRANGVEIELNLPNALLTTAFNNEPLRRFSIEELEEAFATYIEKIPSLKATQRSTPSHEKLLMYSRYRTKNPMPTWIREREQKLQRQDYTPEKVEDEFAGDYSCILHLSSRASEVEGRLVRVGIPLLGKRPSTETTPKNENESKKTPKLRKKSSIQSFA-------------------------GTAK-------SDQFFVEGQRMVMVCKALVKSRAMAYYCRNSEALEWKGAVNMINWFVRKFYKDQVKKDSSLLEVLSALAKAMVSFCDMFIVRRVLDIISLKVVIHGRRCGAMNVVELDDEVSKSEVLKWMDGIVDNWSALERVVLALITLVEKDLKYSGKIRVTGVMNEEVGRVSNAKKIIEEELEMNGLFFGREANLGHTLEAMAWRFQRIADLRLRENVSHGILFECMSVAGEAIRKRPWCCTRIVQQ------QERNIEGEHMAKRD---KLRSLQG----------AAQIERILP-----------NVSDLDDG-ERMCGKGRHRDEIMDLVVLTLGRQERHRQDCAESRELLNRFCWSDIALARDRLLLRGALVYRDDK-RGGGMFATTKIGNAHDITRVILEDDGKFTERWTQELMNAGGMAVEWEASKLKSSVCDKGEVSVSSIAMEALTRKLLFSPDGLQMRVSMTNSGTSTEAVQLSLRHSSGEERNSGLEEDANDGERIMVDAALQSTMQERLAREIRNGGCLGKRLDELLRAVEPRTDEERAAMVQSLHGLVDDGTVRRFAVEERQLRDEQFAAWDGVLYVSAMHVAAL-----SLGNRAATLCWWRDAAGLVDQRALSGVRTAVLMELTRGP 1777          
BLAST of Gvermi9567.t1 vs. uniprot
Match: R7QB02_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB02_CHOCR)

HSP 1 Score: 506 bits (1303), Expect = 6.530e-145
Identity = 534/2017 (26.47%), Postives = 882/2017 (43.73%), Query Frame = 0
Query:    1 MDELFAKVVDHIALGGREGSSLL-ASLTAVQGKSPRPGVLHFLHRQFVTRGERFCAKPSFAAPAEEVIIIAHEAIRQRALGFSPLEQPPLPRQGLQILERVGMARSDGILQSEIGQYVGLAPNMVHHYLGGLIARSLVARKKVVLTKRRAKGGIKHQ--PTE--SSLSQPEQLKPYGTTANKSVTYTAVVVLIRFAPVISQSSASRPVVTLNGSENPEITSSSAAAEQTQDPTRAQSVI--DLTMETRVYRAMQALRPEPHIRSEKDLKVIAMPDSDRAQGVSEEYFRRRRHRCYRALRAKLERAGLVEVVHRECRARNGKAVGNQACLKLTEL-----GIQKLR----KRKDGRLLAEDFDA---SQSSKKRDAHPLLRDGIHT--------RLVEEVGVMEQVYQLLRKAEKGGISIPEMEQYLDGETKLTGLPGKRIRRLVDEIAKFDPITESQRFEGSAMYLRIALSSFVSSEK---------------LNDPNDRASDQGNKPGNRGSKRRKAGITSLGHRRQQIVLKLLEERKVILLEPLGREVAVLE-DSGLQRVDPKVMRRLLNDLISREKIKLITAMKPAIKESKRNQTVTIVALPDIAEGSQDVRNLVTSVVNRTLYGPSSNAAAVSCKSRTNEHPYPQASRKRLSGAGLDIVSCEGGEDTLQEECGTEEVVEQELSRLNGTGKTEEINKSDEHARAGVNEEEAIEEVIKTSAQEYTEFDGNCSSIVISGERTICDKTNAGDDGTNPPIDKNEPPNGSRETNSEPQHVLNESRTGSDSGKPADLNSAPVDNMTMSSIAEVDSCSMPTEEQSPCGKIKGDEDEDNDDYVVSDIVGKKITRINKLRAIDYGLLKGKMARVRAFHKTIYIQMRHNQDSVPVDQPVAHH-TVDSAMDAPVLGRFTMSNVVANMTVGEYATAIGFYQNHGDLVLSFKDEKISNVQGQLEEEVQGQTSARQILNLVQTLTRLGLVESGGDSQWALSGSGLIRDFGKGMPSGVVPHGIIFTSMKAVDTYWRELEQFARCRMSRRPMHVETEGVEEDMIPSNDIEMRFVSDIYFPTRWASGV-VRLQKKDQLIYESMLQLLSGVQLELNLPNSLITTSFKDHPLKHFSVEELEEAFERYKDKIPSLRATQRSMPSHEKLLLYSRYRTKNPIPQWIRERENKIRRQPSAQENVENEFVGDHTCILHLS-SKESVVEGLHFRAGITSLGKRPSFSSIMKTRNAIQGPVKVSKKDSTQCASSSIGKDEEKGEDGRTEKDKKNLIARGTSHGEHKDRVTDGMAVDAQRMVHVSKAVIKSRATAYFCNNSQALEW---------KGVS---------------SMVNWYVRRLYKE---------------------ELNNDPEMVTVVRLLI--NAMVKFCDMSMVRAALDTLALKLVIL--GRFCGEMALP-ENNKNSSRLGSPQCMEKFVTEWQELDHILFALIILQSHDLKYSGNVILSEETLKGFTDQESAKRVIQKEFQL-DGLIYGREELLSHMLEVMASRFRRVADMHLRENVSHGMLVRCISETETALRERASCCTNYM-------LRPSALVSQSSNMSTKTAIDKDCEFKTMDIMGK-----LGPGNEATKADQAEQAH-----QPTNKSGETHHISVEKT------AEGIKSSCGSAKYRRELIEMVVQVVGREQYHMQDSVQSRR----LLDKFCWSDIASARDRLLLRGALTYRAERDSGNGFFTATRNVGGNDYLSMLRDEGEVSKGWMSELCSEEAEVRWETSKFRDAVCDI--------GEASVSSIATNLLTKKMFFENDGLSMMARMSGSGSSKEPIQLFIGRAQNDWTWAVRKKRRIAVRSELKTEIRRRIVCAIGESRHQGRLLTELLEVVKPRSDEDRAAVVWGLHGLLQDGCVRRFVVEQGDVPEEKFAAWH---GVLYLGRAYCEDL-----ELQQDSVGKNGTRVAW-WRNTNGQ-CDTQLVGGMRDCILNCLTETPSARDTELV 1875
            MD++FA+ VD +AL G  G++L   +  A     PRP +L FL  QF TR   F + P +A P   + +IA E++R+RALG+S +E P LP Q  ++L +VG A  DGILQS++   V L+  MV HYLG L AR LVARK+VVLT  +    + H+  P E  +  +QP+ + P  +   K VT T V+VL RFA  ++ S+AS P  T                  +  P R   V   +L +     R ++AL+  P+IR+ KDLK IA+PD +R +  + E F+RRRHR +RA R +LE+A LV VV REC   NG   G+ ACL L  +     G   +     + ++     EDFD    ++ +K   A P L   I T          + EV +++QVY L+R++   G+S+P++   LD  TKL     KRIR +++ +++F PI ESQ+F+GSAM L++ L+ F   +                +    +R + +  +  N   KR K  +TSLG +R+ ++L+LL+E K I+LE LGR +A  E +S + RVD KV+RR++NDL+ ++K++++T +KP+I+  KR QT+ +V LP +   S +V + V+ VV++ ++G  S                P+  RKR +    D++  E  + ++ E                                       AIEE  K   +   +            ER + D                          S P  + +   T ++ G   D+  A   + ++S   + D   +  E ++                        + TRI +L A+DYG +KGK+AR + FH+ +Y ++   Q+ V        H ++++A  AP LGRFT+ + +  M+V +YA  +G +Q+HGD + S + +KIS V+  L+ E+    ++RQ+ +LVQ L +L L++S  + ++AL+GSG+IRDFGKGMP+GV PHG++FT   ++D +W+EL+QFA     +  +H    G   +     +     + D+Y   RW         + +QL YE +LQ +SGV +E+N       +  K   LK F V E+ +  ++    + S+ A  ++    EKLL YSR+R++N IP+ + E   K+   PS ++             L LS    SV+          +  +RP       T+ A++ P +                              + L+ R        D  T+ + VD QR V     ++K RA  Y  +  +   W         K VS               S+V    R+  K                        N +   V++   L+   A+   CD  +V+  +D ++L+LV+       GE A   E   N     S + +             LF   +++ HD  YS + I+ +ET   F  +   K V ++EF L   +    +  +   L  +  R+R ++++  R+ +    +   + +T   +   +   + Y+       +  S L S      +   +     F+  DI        L      T  D  E+       +P  +     H+  +K+      A  ++ +   AK  + +  +    +G++    +  ++SR+    + +   +S+  + R RL L+  + +R E  +G         VG          EG + KG   E  +  ++++ +  K R   C+         GEA       N   K +   +       R    GS        +G            K  +  + E   E+ +++   I E +H G  + EL+E         R  +   + GLL+ G V R  +E    P      W    GVLY+   YC  L     ++     G+   R+A  WR  +G  C+T L   +R  ++N +   P      LV
Sbjct:   41 MDQVFARCVDVLALSGPPGATLTHVTAAATAAPHPRPALLRFLSVQFHTRRALF-SSPDWAQPPHTLHLIACESLRKRALGYSAIEHPVLPEQAWRVLIQVGRAGPDGILQSKLAPLVSLSAVMVSHYLGTLTARRLVARKRVVLTTTKLTSSVTHENAPAEHPNLSNQPQLISP--SDLKKRVTSTTVIVLARFASHLASSNASIPTNTTRIDPTRPPVDPLPYQSNSVPPDRDADVAIHELDVNQGADRVLRALQRPPYIRTLKDLKTIALPDHERPKACTVEDFQRRRHRAFRAFRIRLEKAKLVTVVDRECIDINGNCRGSHACLMLANIPHTNHGANVVAPVVVEDEEAVAAVEDFDIDEDNEGTKPHVASPRLPISIATPPWKGSTAEYIAEVDLVQQVYNLVRESGASGLSVPQIASKLDAGTKLLSAHQKRIRNIINGMSRFVPIIESQKFDGSAMSLKLVLAEFAPKKPEKQEGSHMQECETSLIGSGKERKTGRTQRASNLPRKRNK--LTSLGVQRRNVLLQLLDENKAIVLETLGRRIAERETESSVDRVDQKVLRRIINDLVLQKKVQVLTTLKPSIQ--KRAQTLRLVTLPGLKADSPEVAHAVSVVVSQNVHGKQST---------------PRKPRKRKAE---DVIVLEADDISIAES--------------------------------------AIEEKTKKRRRSQPQ------------ERQLKDSKM-----------------------SNPASIWD---TITEGGLEGDIEQAS-QSASLSGAPQRDPIVVHKERRN-----------------------MRNTRIYRLTAVDYGWMKGKLARAQKFHEHLYQEVCKQQNHVRSGTNALQHISIENARAAPALGRFTIQSCLLQMSVADYAAVVGIHQDHGDALESVQQKKISEVEDILKGEIASSHASRQLTSLVQCLMKLELMKSAQEGKFALAGSGIIRDFGKGMPTGVFPHGVLFTCRTSLDLFWKELQQFAHFEHRKSFVHSSLTGKHGE--ERCEAGQHALPDVYIRMRWGKAFGYTFTQNEQLQYEVVLQRMSGVPVEMNHKGIAANSHIKTDCLKRFDVGEILDHAQKVAPALGSILARLKNTVVAEKLLFYSRFRSRNEIPKDVFE-HLKMGDVPSLRQASTTSEAESSGSTLRLSRGAPSVIRP-------AAATRRPKRLQKRSTKPALKTPPR------------------------------RQLLKR--------DPETE-VVVDIQRFVTALGVIVKRRAKTYCNDVLEVPRWFDSENCSDSKTVSLNKRRSEKHCSPRKASLVETQERKSNKRGNQPRNQSGHLLLCDLDHNAVSQNEEYPSVSISDKLLFPKAIATLCDSQIVQGVIDLVSLRLVLRLKSMHVGESAEQLEKGANDELQTSSESLAA-----------LFRTAVVECHDELYSRHKIVLDETTT-FPSKLQRKAVFEREFHLTSNMRMSYDNSVGDQLTYLVERYRCISNLKARDTLWRQFVF--LGDTVDDVMSSSDDDSTYVRVEVMEQVLLSILNSGRQTQKSSHVMSLLNRFRQEDICNARDRLLLRGAIHVTSTDTMERFFMTRKGEPGGRESAIRHVLQQKSNMADLWASDLEKNWAKAK-DKGMGSIGKTKLGKDAAGKR-CLESRKAAMTITEMVFYSE--NKRRRLRLKPYVGFREE--NGKAIGNVPEKVGPGSDRVQKTVEG-IDKGGPVEKDNGASQLKDKEKKRRQKKCEKQFAGSSSDGEAKEEDTGKNCGPKTLIDVSFRYEEEVRAGAHGSGP------LGSC----------KMEVVAKVE-DGELEKQVEDVIMEGKHLGVTIRELVE--SRVGQGCRWKLARAVQGLLRKGMVHRLSIETDGHPTLHGVEWECSDGVLYIHANYCSALMVHRYKMDSKKQGRTEARLACIWRTCDGNGCET-LASNVRQSVMNQVMRNPGMEVISLV 1842          
The following BLAST results are available for this feature:
BLAST of Gvermi9567.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ISU4_9FLOR0.000e+047.06B-block_TFIIIC domain-containing protein n=1 Tax=G... [more]
R7QB02_CHOCR6.530e-14526.47Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1076..1096
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1194..1233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1515..1544
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 647..666
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1522..1536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1208..1233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 652..666
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 718..748
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 704..757
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..478
IPR007309B-block binding subunit of TFIIICPFAMPF04182B-block_TFIIICcoord: 95..191
e-value: 4.6E-6
score: 26.7
IPR044210Transcription facto Tfc3-likePANTHERPTHR15180GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1coord: 1..995

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24230contigScGOVlb_24230:1322377..1328703 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi9567.t1Gvermi9567.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24230 1322377..1328703 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi9567.t1 ID=Gvermi9567.t1|Name=Gvermi9567.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1880bp
MDELFAKVVDHIALGGREGSSLLASLTAVQGKSPRPGVLHFLHRQFVTRG
ERFCAKPSFAAPAEEVIIIAHEAIRQRALGFSPLEQPPLPRQGLQILERV
GMARSDGILQSEIGQYVGLAPNMVHHYLGGLIARSLVARKKVVLTKRRAK
GGIKHQPTESSLSQPEQLKPYGTTANKSVTYTAVVVLIRFAPVISQSSAS
RPVVTLNGSENPEITSSSAAAEQTQDPTRAQSVIDLTMETRVYRAMQALR
PEPHIRSEKDLKVIAMPDSDRAQGVSEEYFRRRRHRCYRALRAKLERAGL
VEVVHRECRARNGKAVGNQACLKLTELGIQKLRKRKDGRLLAEDFDASQS
SKKRDAHPLLRDGIHTRLVEEVGVMEQVYQLLRKAEKGGISIPEMEQYLD
GETKLTGLPGKRIRRLVDEIAKFDPITESQRFEGSAMYLRIALSSFVSSE
KLNDPNDRASDQGNKPGNRGSKRRKAGITSLGHRRQQIVLKLLEERKVIL
LEPLGREVAVLEDSGLQRVDPKVMRRLLNDLISREKIKLITAMKPAIKES
KRNQTVTIVALPDIAEGSQDVRNLVTSVVNRTLYGPSSNAAAVSCKSRTN
EHPYPQASRKRLSGAGLDIVSCEGGEDTLQEECGTEEVVEQELSRLNGTG
KTEEINKSDEHARAGVNEEEAIEEVIKTSAQEYTEFDGNCSSIVISGERT
ICDKTNAGDDGTNPPIDKNEPPNGSRETNSEPQHVLNESRTGSDSGKPAD
LNSAPVDNMTMSSIAEVDSCSMPTEEQSPCGKIKGDEDEDNDDYVVSDIV
GKKITRINKLRAIDYGLLKGKMARVRAFHKTIYIQMRHNQDSVPVDQPVA
HHTVDSAMDAPVLGRFTMSNVVANMTVGEYATAIGFYQNHGDLVLSFKDE
KISNVQGQLEEEVQGQTSARQILNLVQTLTRLGLVESGGDSQWALSGSGL
IRDFGKGMPSGVVPHGIIFTSMKAVDTYWRELEQFARCRMSRRPMHVETE
GVEEDMIPSNDIEMRFVSDIYFPTRWASGVVRLQKKDQLIYESMLQLLSG
VQLELNLPNSLITTSFKDHPLKHFSVEELEEAFERYKDKIPSLRATQRSM
PSHEKLLLYSRYRTKNPIPQWIRERENKIRRQPSAQENVENEFVGDHTCI
LHLSSKESVVEGLHFRAGITSLGKRPSFSSIMKTRNAIQGPVKVSKKDST
QCASSSIGKDEEKGEDGRTEKDKKNLIARGTSHGEHKDRVTDGMAVDAQR
MVHVSKAVIKSRATAYFCNNSQALEWKGVSSMVNWYVRRLYKEELNNDPE
MVTVVRLLINAMVKFCDMSMVRAALDTLALKLVILGRFCGEMALPENNKN
SSRLGSPQCMEKFVTEWQELDHILFALIILQSHDLKYSGNVILSEETLKG
FTDQESAKRVIQKEFQLDGLIYGREELLSHMLEVMASRFRRVADMHLREN
VSHGMLVRCISETETALRERASCCTNYMLRPSALVSQSSNMSTKTAIDKD
CEFKTMDIMGKLGPGNEATKADQAEQAHQPTNKSGETHHISVEKTAEGIK
SSCGSAKYRRELIEMVVQVVGREQYHMQDSVQSRRLLDKFCWSDIASARD
RLLLRGALTYRAERDSGNGFFTATRNVGGNDYLSMLRDEGEVSKGWMSEL
CSEEAEVRWETSKFRDAVCDIGEASVSSIATNLLTKKMFFENDGLSMMAR
MSGSGSSKEPIQLFIGRAQNDWTWAVRKKRRIAVRSELKTEIRRRIVCAI
GESRHQGRLLTELLEVVKPRSDEDRAAVVWGLHGLLQDGCVRRFVVEQGD
VPEEKFAAWHGVLYLGRAYCEDLELQQDSVGKNGTRVAWWRNTNGQCDTQ
LVGGMRDCILNCLTETPSARDTELVTASH*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007309TFIIIC_Bblock-bd
IPR044210Tfc3-like