Gvermi953.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi953.t1
Unique NameGvermi953.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length465
Homology
BLAST of Gvermi953.t1 vs. uniprot
Match: A0A2E5AK36_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2E5AK36_9FLAO)

HSP 1 Score: 75.1 bits (183), Expect = 1.270e-10
Identity = 58/205 (28.29%), Postives = 99/205 (48.29%), Query Frame = 0
Query:  163 GCMDETAINFNPLAFEDDGSCVYTLVLESGTVVQPVCTGDL-GSVPYTISGGTEPYT-VTVDGETVGNPALLEVGTHTVLLTDSGVDELAQTAQFDVTINEPEEFIATVSIVE-NQLQALAGNSYTWSLDGVL---------IDGAVSQDYTPVASGDYTVTVFNAIDCSDESDAIAI-----VIGCMDDTFVEYNADANIDDGS 350
            GC D TA+N++PLA  DDGSC+Y  V  + TV    C G   G++   ++GG+ PYT +  +G+T  +   L  G+++V++TDS    + Q A     I EP+      +++  +   +  G+ Y ++  G+               +Q    +  G YT  + +   C    + I +     + GC D T + Y++ A +DDGS
Sbjct:  419 GCTDSTALNYDPLATVDDGSCIYPPVTLNATVNNISCYGQTDGNINLHVTGGSSPYTFIWSNGQTTEDIYNLSSGSYSVVVTDS----INQQATASFNIIEPDSLYTNYTVINASGPTSNDGSIYAFTFGGITPYTYYWLSSYINDTTQHLLNIPPGSYTSYILDDNGCFT-FELITVGYDSTIYGCTDPTALNYDSLATVDDGS 618          
BLAST of Gvermi953.t1 vs. uniprot
Match: A0A2E4REH3_9FLAO (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2E4REH3_9FLAO)

HSP 1 Score: 69.3 bits (168), Expect = 9.750e-9
Identity = 50/150 (33.33%), Postives = 75/150 (50.00%), Query Frame = 0
Query:   37 ESTATVLIAPEGNDILLFGNPIEVGDTLGVFVEAEAGVFNCAGKVAWEGPDENLVIAARGDISGAGEPANGFVAGDDYIFYVKT-QDTEQSFPGTPTYDTSDFFIDTWGADQFTKVTALVINADAPAGCMDETAINFNPLAFEDDGSCVY 185
            +  AT+LI  + N I + GNPI++G  +GVF     G     G V W G  E   IAA G  +G    +NGF  G+ Y + V     ++ +  G+       F  + +  +  + + AL   A    GC+D TA+N+NP A +D+GSC Y
Sbjct:  913 DCNATILIPGDAN-ITIDGNPIDIGSWIGVFYIDNNGELAFGGGVEWNG--ETTSIAAWGSEAGL---SNGFATGESYTWAVYDFNSSDITLAGSVEMS---FGENAYSCNGLSGLAAL--EAGIIPGCIDSTALNYNPNAEQDNGSCCY 1051          
BLAST of Gvermi953.t1 vs. uniprot
Match: A0A2D9UGU0_9FLAO (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2D9UGU0_9FLAO)

HSP 1 Score: 65.1 bits (157), Expect = 2.060e-7
Identity = 51/152 (33.55%), Postives = 73/152 (48.03%), Query Frame = 0
Query:   35 NPESTATVLIAPEGNDILLFGNPIEVGDTLGVFVEAEAGVFNCAGKVAWEGPDENLVIAARGDISGAGEPANGFVAGDDYIFYVKTQDTEQ-SFPGTPTYDTSDFFIDTWGADQFTKVTALVINADAPAGCMDETAINFNPLAFEDDGSCVY 185
            N +  AT+L+ PE  +I + G  +  G  +GVF   + G     G   W G  E   IAA G  S AGE  NGF +G++Y + V   D E+ S     +    D      G    + + A +I      GC D +A+N+NP A +D+GSC Y
Sbjct:  906 NTDCNATILV-PEDVNISIDGISLSFGSWIGVFYTDQNGELAFGGGTIWNG--ETTSIAAWG--SEAGED-NGFQSGEEYTWGVYNIDNEETSLASNISMSFGDNAYSCNGLSGLSSLEAGII-----PGCTDSSALNYNPNAEQDNGSCCY 1046          
BLAST of Gvermi953.t1 vs. uniprot
Match: A0A3C0K6Q6_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3C0K6Q6_9CHLR)

HSP 1 Score: 61.6 bits (148), Expect = 1.290e-6
Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 0
Query:   61 GDTLGVFVEAEAGVFNCAGKVAWEGPDENLVIAARGDISGAGEPANGFVAGDDYIFYVKTQDTEQSFPGTPTYDTSDFFIDTWGADQFTKVTALVINADAPAGCMDETAINFNPLAFEDDGSCVYTLVLESGTVVQPVCTGDLGSVP 207
            GD +GVF         C G   +E  D    +AA G  +G     NGF  G+ +I+ V   +T  S     TY  +      +  +  + +++ +   +   GCMD  A N+NPLA EDDGSC+Y   +   T+    C   +  VP
Sbjct:   71 GDWIGVFYTDSNNQLACGGYTLFE--DVTSAVAAWGAETGED---NGFQIGESFIWMVYDSETNTSIIVDATYSNNLPNQGEYAPNGLSAISSFIWTFE---GCMDIEAYNYNPLATEDDGSCIYPPWIPPVTITD--CNAQVAFVP 207          
BLAST of Gvermi953.t1 vs. uniprot
Match: A0A2E4KAA8_9FLAO (Peptidase M12B domain-containing protein (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2E4KAA8_9FLAO)

HSP 1 Score: 60.1 bits (144), Expect = 5.800e-6
Identity = 36/107 (33.64%), Postives = 55/107 (51.40%), Query Frame = 0
Query:  163 GCMDETAINFNPLAFEDDGSCVYTLVLESGTVVQPVCTGDL-GSVPYTISGGTEPYTVTVD-GETVGNPALLEVGTHTVLLTDSGVDELAQTAQFDVTINEPEEFIA 267
            GC D  AIN++P A  DDG+C+Y   + S  ++   C G    S+  T+SGG  PY    D G    +   ++ G +TV +    +D L QT+    T++EP +  A
Sbjct:  421 GCTDPNAINYDPNATVDDGTCLYNAPVLSANIIDVSCFGASDASIDLTVSGGLSPYIFIWDNGSFTQDLFNIDAGVYTVTV----IDNLGQTSSSTFTVSEPSQLNA 523          
BLAST of Gvermi953.t1 vs. uniprot
Match: A0A7T9J0J7_9SPHI (T9SS type A sorting domain-containing protein n=1 Tax=Sphingobacteriales bacterium TaxID=2044944 RepID=A0A7T9J0J7_9SPHI)

HSP 1 Score: 60.1 bits (144), Expect = 6.100e-6
Identity = 36/105 (34.29%), Postives = 61/105 (58.10%), Query Frame = 0
Query:  229 PALLEVGTHTVLLTDSGVDELAQTAQFDVTINEPEEFIATVSIVENQ-LQALAGN--SYTWSLDGVLIDGAVSQDYTPVASGDYTVTVFNAIDCSDESDAIAIVI 330
            PA+  +GTHT+  T   +     TA+FD+T+ EP   + T +IV+N  + ++  +  +Y W ++G+ +DGA S  +TP+ SG Y+VT +    C+  S+    VI
Sbjct:  507 PAVAGIGTHTITYTYDDI-----TAEFDITVTEP---LGTETIVQNDNVLSIPSDYQTYQWYMNGIPVDGANSNTFTPLVSGSYSVT-YTLNSCTATSETTQFVI 602          
The following BLAST results are available for this feature:
BLAST of Gvermi953.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2E5AK36_9FLAO1.270e-1028.29Uncharacterized protein n=1 Tax=Flavobacteriales b... [more]
A0A2E4REH3_9FLAO9.750e-933.33Thioredoxin domain-containing protein (Fragment) n... [more]
A0A2D9UGU0_9FLAO2.060e-733.55Thioredoxin domain-containing protein (Fragment) n... [more]
A0A3C0K6Q6_9CHLR1.290e-629.93Uncharacterized protein (Fragment) n=1 Tax=Chlorof... [more]
A0A2E4KAA8_9FLAO5.800e-633.64Peptidase M12B domain-containing protein (Fragment... [more]
A0A7T9J0J7_9SPHI6.100e-634.29T9SS type A sorting domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044960Ribulose bisphosphate carboxylase/oxygenase activase-likePANTHERPTHR32429FAMILY NOT NAMEDcoord: 158..186
NoneNo IPR availablePANTHERPTHR32429:SF9POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASEcoord: 158..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..464

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:1525733..1539155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi953.t1Gvermi953.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 1525733..1539155 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi953.t1 ID=Gvermi953.t1|Name=Gvermi953.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=465bp
MKKLYAKVFLSLVCMTLFGMKMSAQTINWQLPSENPESTATVLIAPEGND
ILLFGNPIEVGDTLGVFVEAEAGVFNCAGKVAWEGPDENLVIAARGDISG
AGEPANGFVAGDDYIFYVKTQDTEQSFPGTPTYDTSDFFIDTWGADQFTK
VTALVINADAPAGCMDETAINFNPLAFEDDGSCVYTLVLESGTVVQPVCT
GDLGSVPYTISGGTEPYTVTVDGETVGNPALLEVGTHTVLLTDSGVDELA
QTAQFDVTINEPEEFIATVSIVENQLQALAGNSYTWSLDGVLIDGAVSQD
YTPVASGDYTVTVFNAIDCSDESDAIAIVIGCMDDTFVEYNADANIDDGS
CATVVVEGCTDDTFLEFNPDANTDDGSCLTPVVEGCTDDTAFNYNADANV
DDGSCVAPLSIEYTITNPGCDLDNGTVDYTISGVDDDIIDNANAVDEEKM
ATHHSYLFFGQFAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR044960RCA-like