Gvermi9509.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi9509.t1
Unique Name	Gvermi9509.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	349

Homology

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BLAST of Gvermi9509.t1 vs. uniprot
Match: A0A2V3IXU9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXU9_9FLOR)

HSP 1 Score: 389 bits (1000), Expect = 4.410e-132
Identity = 212/338 (62.72%), Postives = 261/338 (77.22%), Query Frame = 0

Query:   15 FVFTLVPTRSLASTAAALSSAPSKSSADHNQCHAVVK-EDEILCEAAKVKQASINQVIQEDEAWRDQEPHPEP-RDPWAAAFEQWVIGKSPSDDKKGVNPALEEELKRYP--SAKEAKIIDETVTLADTNDDELTVITAAVRNISELEVASEQLKVALDTIEELCNSGDNGRQMQAAGGVPHLLRHASSVSTDVSLLSIRALATCAQNNPIVFDSAVDEGAIVSMLKLADNGNDALRAASLRVLVAVSDSSKAKDVLQEEESDIVRVVLDSLRKNSGMDGTRCQIRALALVEQCLLRYKDNWKQIFASSGLVGVAEEALHSESVDVREGAARVLRMLR 348
            F+F L+   + ASTA +L  APS + A   QC A    EDE+LCEAAK K+ASI QV++EDEA R+    P   RD W AA+EQW+ GK  +   K VN AL+E +KRYP  ++ + K       + D +DDELTVITAAV+ IS+  V +E+LK+AL TIEELCNSGDNGRQMQAAGGVPHLLRHA+S S ++SLLS+R LATCAQNNP VFDSAV+EGA+ SML LADNGNDALRAASLR LVAV+DS KA + LQ+++ D+VR+V +SL+KNSG DG RCQIRALALVEQCL+R +D+WK +F S GL+ +AE+AL S+S+DVREGAARVLRMLR
Sbjct:   11 FLFALLINSTFASTATSLR-APSDAPAQEEQCRAGGGLEDEVLCEAAKAKRASIQQVVEEDEASREPPETPSADRDVWTAAYEQWIEGKQSAGKPKAVNRALKEAMKRYPDVASPQEKEQQNDFIMPDMDDDELTVITAAVQQISDANVTAERLKLALVTIEELCNSGDNGRQMQAAGGVPHLLRHATSESVELSLLSVRTLATCAQNNPSVFDSAVEEGAVASMLTLADNGNDALRAASLRALVAVADSGKAHEPLQDKKDDVVRIVRESLKKNSGTDGQRCQIRALALVEQCLVRLRDSWKTVFVSGGLIDIAEQALKSDSIDVREGAARVLRMLR 347

The following BLAST results are available for this feature:

BLAST of Gvermi9509.t1 vs. uniprot

BLAST of Gvermi9509.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IXU9_9FLOR	4.410e-132	62.72	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 154..174
None	No IPR available	PANTHER	PTHR19316:SF18	HSP70-BINDING PROTEIN 1	coord: 97..344
None	No IPR available	PANTHER	PTHR19316	PROTEIN FOLDING REGULATOR	coord: 97..344
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 9..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..8
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 21..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..348
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 125..348 e-value: 2.6E-23 score: 84.6
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 160..347

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24230	contig	ScGOVlb_24230:1126011..1127260 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi9509.t1	Gvermi9509.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24230 1126011..1127260 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi9509.t1 ID=Gvermi9509.t1|Name=Gvermi9509.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=349bp
MVASNALEFLPSAPFVFTLVPTRSLASTAAALSSAPSKSSADHNQCHAVV
KEDEILCEAAKVKQASINQVIQEDEAWRDQEPHPEPRDPWAAAFEQWVIG
KSPSDDKKGVNPALEEELKRYPSAKEAKIIDETVTLADTNDDELTVITAA
VRNISELEVASEQLKVALDTIEELCNSGDNGRQMQAAGGVPHLLRHASSV
STDVSLLSIRALATCAQNNPIVFDSAVDEGAIVSMLKLADNGNDALRAAS
LRVLVAVSDSSKAKDVLQEEESDIVRVVLDSLRKNSGMDGTRCQIRALAL
VEQCLLRYKDNWKQIFASSGLVGVAEEALHSESVDVREGAARVLRMLR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold