Gvermi9462.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi9462.t1
Unique NameGvermi9462.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length335
Homology
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BLAST of Gvermi9462.t1 vs. uniprot
Match: A0A2V3J6G6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6G6_9FLOR)

HSP 1 Score: 296 bits (759), Expect = 4.290e-96
Identity = 155/290 (53.45%), Postives = 204/290 (70.34%), Query Frame = 0 
Query:   41 RTYSCGERVPMEEVLRGIRRLQASAHPENEPLVLLNEVDQRRKD--HVRSLPPFIPYSLQWHPTDLLSGPMLFQRKFLTSSVVDQLVVLVDHNDRANGVYCSVGGPWDNTIRDHLSEKYTLRPLSQFSIRDRERLLYSPNVYRFLFVQHPLTRLHIMYRNATKAGLDSHAYRSFVSTVRGIPLGEGERVMQLLTPRFFITFLSRLPTLPVDFASQSQFCAFSTIKYHLAGHIESFASNIAQLNRRLSLGGGTFSEPSLLDKKSFEKEWADKRLRSHIAKLYADDFRNFEY 328
            R++SCGE VP++EV R I   Q   +PE+EP+V L E D RR++  H+R LPP   +SLQW  T   S  M+  R+FL S +VD+L+V+ D+ DR   VYC V G     +R HL  +YTLRPL QFSIRDRERLL +  ++RFLFV++P+ RL  +++NAT  GL+S +YR+F+S VRG+PL + ER+MQLLTP+FF+ FLSRLP L   FASQS  C +S I+YHLAGH+ESF+ +I  +NR LSL GGTF   +    ++   EW +KRL S IAKLYADDFR+F Y
Sbjct:   35 RSFSCGESVPIDEVFRAIYHRQFIPNPESEPIVPLTESDARRRESAHIR-LPPQ-SHSLQWSHTYFHS--MVLPRQFLKSPLVDRLLVVTDNADRPRAVYCPVFGTMHEALRAHLGTRYTLRPLWQFSIRDRERLLTTSEIFRFLFVENPVRRLQHIFQNATDQGLNSESYRNFLSQVRGVPLAKDERIMQLLTPKFFLAFLSRLPVLTHTFASQSDSCGYSVIQYHLAGHVESFSEHIMYVNRNLSLPGGTFHTATGTHHRALPPEWMEKRLLSRIAKLYADDFRHFGY 320
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BLAST of Gvermi9462.t1 vs. uniprot
Match: A0A7S1T5I0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T5I0_9RHOD)

HSP 1 Score: 98.6 bits (244), Expect = 2.230e-19
Identity = 64/182 (35.16%), Postives = 98/182 (53.85%), Query Frame = 0 
Query:  159 LRPLSQFSIRDRERLLYSPNVYRFLFVQHPLTRLHIMYRNATK-AGLDSHAYRSFVSTVRGIPLGEGERVMQLLTPRFFITFLSRLPT--LPVDFASQSQFCAFSTIKYHLAGHIESFASNIAQLNRRLSLGGGTFSEP-----SLLDKKSFEKEW-ADKRLRSHIAKLYADDFRNFEYEVS 331
            LR LS +S RD+ERLL+  +  R +FV++P  R+  +Y NAT  A L+SH YR+F+S VRG  L E ER +Q+++  FF+  +  +    LP  FA Q   C    I Y   G  ESF  ++ +L  +L +    F  P     +L +K  +     A  + R  I K+Y +DF  ++Y ++
Sbjct:  246 LRLLSDYSDRDKERLLHREDFIRIIFVRNPFNRILSLYYNATHDADLNSHEYRNFMSLVRGRKLSEKEREVQIISFSFFLKDIGSVKRQELPPLFAPQVDVCGAEFIDYQFVGRYESFGRDVQRLLSKLGIPLSLFPTPGELGLALTNKSRYHSLLDASPKHRPRIVKIYNEDFVAWKYSMN 427
The following BLAST results are available for this feature:
BLAST of Gvermi9462.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6G6_9FLOR4.290e-9653.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1T5I0_9RHOD2.230e-1935.16Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005331SulfotransferasePFAMPF03567Sulfotransfer_2coord: 156..328
e-value: 1.2E-6
score: 28.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..334
NoneNo IPR availableTMHMMTMhelixcoord: 21..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24230contigScGOVlb_24230:883245..884249 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi9462.t1Gvermi9462.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24230 883245..884249 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi9462.t1 ID=Gvermi9462.t1|Name=Gvermi9462.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=335bp
MLRSRRQRAKYNTRLLVRRSVAAVVACFILYTFAGPQHQPRTYSCGERVP
MEEVLRGIRRLQASAHPENEPLVLLNEVDQRRKDHVRSLPPFIPYSLQWH
PTDLLSGPMLFQRKFLTSSVVDQLVVLVDHNDRANGVYCSVGGPWDNTIR
DHLSEKYTLRPLSQFSIRDRERLLYSPNVYRFLFVQHPLTRLHIMYRNAT
KAGLDSHAYRSFVSTVRGIPLGEGERVMQLLTPRFFITFLSRLPTLPVDF
ASQSQFCAFSTIKYHLAGHIESFASNIAQLNRRLSLGGGTFSEPSLLDKK
SFEKEWADKRLRSHIAKLYADDFRNFEYEVSVPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005331Sulfotransferase