Gvermi9456.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi9456.t1
Unique Name	Gvermi9456.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	332

Homology

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BLAST of Gvermi9456.t1 vs. uniprot
Match: R7QIQ0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIQ0_CHOCR)

HSP 1 Score: 261 bits (668), Expect = 5.600e-83
Identity = 147/284 (51.76%), Postives = 184/284 (64.79%), Query Frame = 0

Query:   79 VFRRSTSTLAAAFSSDRSAVQPPR----IASQAEFRRTFLKLNRHRLLRDVDGNCFRLHPIVMNGDCGFASIAKGINLARHT---MAP------------------SHPXXXXXXXXTHSSLRSNRSRFRR--SLPRLWRR--TQSAHHPNKRTLHAKDIRTAMLPEIRKAKKTYLGDRHTFGALFNDHDFDRLEREVSNPGIAGHWLGTVLGVLEHVIIAHAMNVNIFLYQFDLQRQSIRRFESATVHSPDCDVYLFFTGPATSGHFDTLVKLPN--DVIFSA 331
            +FRR  + LAA  +   +   P      I SQAEFRR FLK+++ R++RD +G CFRLHPIVMNGDCGF +IAKGIN+AR     MAP                  +           H S   +R R+RR  S P +W R   + A     ++L AKD+R AM  E++KA+KTYL +      ++ + DFD LEREVS+PGIAGHWLGTVLGVLEHVI+A AMN++I+LYQFDLQRQ IR+FESATV +PDC+VYLFFTGPA  GHFDTLVK+ N  D +F A
Sbjct:    1 MFRRRPTNLAATAAHTAARGYPNNAAAPITSQAEFRRNFLKVHKDRVIRDNNGTCFRLHPIVMNGDCGFGAIAKGINVARERVRDMAPQPXXXXXXXXFPIQQRSQTQNQPQHNNRNKHFSFAHDRKRWRRIRSRPWIWHRLVARRAQDRPTKSLQAKDLRKAMFDELKKARKTYLDECEDLSGIYTNDDFDTLEREVSHPGIAGHWLGTVLGVLEHVIVAQAMNIDIYLYQFDLQRQCIRQFESATVENPDCEVYLFFTGPAACGHFDTLVKISNTRDNLFMA 284

The following BLAST results are available for this feature:

BLAST of Gvermi9456.t1 vs. uniprot

BLAST of Gvermi9456.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
R7QIQ0_CHOCR	5.600e-83	51.76	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.70.80		coord: 115..321 e-value: 5.5E-5 score: 25.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..173

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24230	contig	ScGOVlb_24230:872412..873407 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi9456.t1	Gvermi9456.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24230 872412..873407 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi9456.t1 ID=Gvermi9456.t1|Name=Gvermi9456.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=332bp
MRQPLVNDADSRHLEFASAPNLALPPPSTPRVISEHHAAVSAFHRIQHDS
PPPQQPSPSPPRPAQRAPPTPKKPRAWAVFRRSTSTLAAAFSSDRSAVQP
PRIASQAEFRRTFLKLNRHRLLRDVDGNCFRLHPIVMNGDCGFASIAKGI
NLARHTMAPSHPPPPPPPPPTHSSLRSNRSRFRRSLPRLWRRTQSAHHPN
KRTLHAKDIRTAMLPEIRKAKKTYLGDRHTFGALFNDHDFDRLEREVSNP
GIAGHWLGTVLGVLEHVIIAHAMNVNIFLYQFDLQRQSIRRFESATVHSP
DCDVYLFFTGPATSGHFDTLVKLPNDVIFSA*