Gvermi9402.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi9402.t1
Unique NameGvermi9402.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length260
Homology
BLAST of Gvermi9402.t1 vs. uniprot
Match: A0A2V3IM67_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM67_9FLOR)

HSP 1 Score: 315 bits (806), Expect = 1.840e-105
Identity = 150/251 (59.76%), Postives = 195/251 (77.69%), Query Frame = 0
Query:    9 KEPNQLVVPVVSVPDEKSVMTPGELRQVSLDYELFQSILKSGSTCFGCIKADEYSFGITGVSGALVTLLMVKGVEREDGPRVVLDCRCSSRLTVLSTASESENSNVTMARVQKVRDHPLDSFAERREVSQLEWRLWNTCKEISSLQNMLENDQLPSKTVEQELAVWAPKAYDKEIEEHEWNATPYVTRQVFWDRAECFSFGILRCMQGDETVTLKARHTTKTLERLRMAIAFLQEKKALTYAQLSLKKALD 259
            +EP QLV+PV+SVP E S+M PGE+RQ+SLDYELFQS+L+ GST FGC+ A +   G+ G+SGAL+T+L VK +E+ + PRV+++CRCS RL+VLS A+ES   N+   RVQKV+D   DS +ERREV+QLEW LW +CKE+  L   L+N  + ++ VE EL+VWAP+ YD++IEEHEW +TP VTRQV+W+RAECFSFG+LR M+GDE +  KAR  T T +RLRMA+ F+ EKKA TYAQLSLK AL 
Sbjct:    4 QEPQQLVLPVISVPGENSLMAPGEVRQLSLDYELFQSMLQGGSTFFGCVSAKDCKNGVLGISGALLTVLAVKSIEQGELPRVLIECRCSGRLSVLSAATESSTENLDFVRVQKVKDESEDSISERREVAQLEWALWKSCKEVVGLVRKLQNGVVKARAVELELSVWAPREYDRDIEEHEWESTPQVTRQVYWERAECFSFGVLRWMEGDEELMRKARRMTNTADRLRMALLFVDEKKAKTYAQLSLKNALS 254          
BLAST of Gvermi9402.t1 vs. uniprot
Match: R7QMT2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMT2_CHOCR)

HSP 1 Score: 142 bits (359), Expect = 2.970e-38
Identity = 86/227 (37.89%), Postives = 128/227 (56.39%), Query Frame = 0
Query:   54 FGCIKADEYS-FGITGVSGALVTLLMVK----------GVEREDG--PRVVLDCRCSSRLTVLST-----ASESENSNVTMARVQK----VRDHPLDSFAERREVSQLEWRLWNTCKEISSLQNMLENDQLPSKTVEQELAVWAPKAYDKEIEEHEWNATPYVTRQVFWDRAECFSFGILRCMQGDETVTLKARHTTKTLERLRMAIAFLQEKKALTYAQLSLKKAL 258
            +G + ADE+   G     G ++ +L ++          G E  D   PR+++ CRCS R  V        A ++   ++  + V      VRD   +S A+R++++ LEW  WN C+E++SL   L   +  +  +EQEL+VWAP  YD++I E EW  TP  TR+VF  RAE FSFG+LRCM+ +  V  +AR TT T++RL MAI   ++++A   AQLSLK  L
Sbjct:    2 YGIVHADEWDPSGERSTRGVVMNVLSIENLLQNSSAETGQEDPDKLLPRILVGCRCSGRFDVQRVVDGVLAEDARPDSIVYSHVNAMCTLVRDLGAESIADRQKLATLEWDAWNACREVASLIRKLAPPKGKAPLIEQELSVWAPADYDRDISEGEWAKTPPPTREVFCRRAESFSFGVLRCMESEGEVMREARLTTSTVQRLEMAIDMAEKRQAYVKAQLSLKNTL 228          
BLAST of Gvermi9402.t1 vs. uniprot
Match: A0A1X6PFX7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PFX7_PORUM)

HSP 1 Score: 92.8 bits (229), Expect = 1.420e-18
Identity = 77/261 (29.50%), Postives = 119/261 (45.59%), Query Frame = 0
Query:   14 LVVPVVSVPDEKSVMTPGELRQVSLDYELFQSILKSGSTCFG-CIKADEYSFGITGVSG------------ALVTLLMV-----KGVEREDGPRVVLDCRCSSRLTVLSTASESENSNVTMARVQKVRDHPLDSFAERREVSQLEWRLWNTCKEISSLQNMLENDQ---LPSKTVEQELAVWAPKAYDKEIEEHEWNATPYVTRQVFWDRAECFSFGILRCMQGDETVTLKARHTTKTLERLRMAIAFLQEKKALTYAQLS 253
            L +PVV VP   + +TPG    +++ Y     +L SG+T F   + A   + G    S             A+VT+L +      G    D   V +D RC+SR  +L      + ++VT + V  + D P  + A+R  ++  EW +W   + +S L   L+       P  T    + VWAP AYD+E+ E EW ATP   R  +  R E FSFG+LR           A   T   ERL +A   +++++    A+L+
Sbjct:   44 LHLPVVFVP-AGAKLTPGATGSITVVYGELTRLLSSGATSFAQLVPAPSSAIGAAATSSRDERMPPPLAIAAVVTILSLVRVDPTGATSGDEAVVTMDVRCTSRARLLLY----DPASVTASFVS-LTDWPAWTLADRAAIAHAEWDVWTAVQGLSRLAGRLDRGGGGWCPLPTAVVAVRVWAPPAYDRELSEPEWAATPVPVRTAWQARVEAFSFGVLRVAGARGEDVDAAMELTDVRERLELAGLAVEQQRRTILARLA 298          
The following BLAST results are available for this feature:
BLAST of Gvermi9402.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IM67_9FLOR1.840e-10559.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QMT2_CHOCR2.970e-3837.89Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6PFX7_PORUM1.420e-1829.50Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 224..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24230contigScGOVlb_24230:429806..430585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi9402.t1Gvermi9402.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24230 429806..430585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi9402.t1 ID=Gvermi9402.t1|Name=Gvermi9402.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=260bp
MMIPSTPDKEPNQLVVPVVSVPDEKSVMTPGELRQVSLDYELFQSILKSG
STCFGCIKADEYSFGITGVSGALVTLLMVKGVEREDGPRVVLDCRCSSRL
TVLSTASESENSNVTMARVQKVRDHPLDSFAERREVSQLEWRLWNTCKEI
SSLQNMLENDQLPSKTVEQELAVWAPKAYDKEIEEHEWNATPYVTRQVFW
DRAECFSFGILRCMQGDETVTLKARHTTKTLERLRMAIAFLQEKKALTYA
QLSLKKALD*
back to top