Gvermi939.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi939.t1
Unique NameGvermi939.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length500
Homology
BLAST of Gvermi939.t1 vs. uniprot
Match: A0A2V3J331_9FLOR (DNA polymerase delta small subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J331_9FLOR)

HSP 1 Score: 651 bits (1679), Expect = 2.510e-230
Identity = 324/502 (64.54%), Postives = 388/502 (77.29%), Query Frame = 0
Query:    1 MRSKETSDLSMSSARNGAHPVERKTIKIDTTPSKRFLLPRKKRYEPQYAHIYFCRLIALRPAVQTAAHASFGPPSEKLFYANRIVNVSSENAQDVETVIIGVVYRQMQKPSILALYEQPSHDLIPSPPRRSSTPYPGSSDSVVLEDENGRCTLDVSALHPMPDSFVTGFVVAVKGAEDQVTGTFKVSDFCSVMPAPQKALKELQGDSYICLLSSLSLSTPSFAPEILAEFLKGNTLEEDEGFQRNIVAVVIAGNLIGHVEAAPVHKPLAVGDKERIASPMVDADRFLSGLASAIPVFHMAGEKDPTNYLLPQQPLHRCLLPSSARNANFKRVANPFACEFGGRLLLATSGQNVSDFALYETQQSKEGNDETTNMEDA---EKAYEPSGERVTDILESMLKNRHVAPTCPDTLGSYPFYEKDPFVVESTPHIFIAGNQKEFGTKTMKVRSEASQQSDEQTNVDRDLNGSVRLISVPRFDSTGQAVFVNLKNMDCTIREFGVAM 499
            M SKE +    S+  NG H   RKTI ID  PSKRF+LP KKRYEPQYAHIYFCRL ALRPA+++ A   FGPPS+KL +A RIVNVSSE A + ETVIIGVV+RQM KPSILALYEQ SHDLIP+PP R++ PYPG+ D+V LEDENGRCTLD+S    +PD+FVTGFVVAVKG ED + GTFKV  F  V+ APQ  LK  + D+YIC++SSL L  PSF  E+L EFLKGNTLEEDE F  N VA+VI GN+IGHV   P H+PLAVG+KERIASPMVDADRFLSG+AS +PVF+M GE D TNYLLPQQ ++RCLLPS++RN+NF RV NP  CE  GR LLATSGQNV DFALY  + +K+  ++   +E     +  YE  GERV +I+ +MLKNRH+APTCPDTLGSYPFYE+DPFV+E TPHIF+ GNQKEFG + ++V +E SQ SDE   V+ ++ G+V L+S PRFD +GQAVFVNL+NM+C +REF V M
Sbjct:    1 MHSKEQAAQPQSNGENGNHAKVRKTIPIDLEPSKRFVLPSKKRYEPQYAHIYFCRLTALRPALESTARVIFGPPSDKLHHAKRIVNVSSEGANERETVIIGVVFRQMTKPSILALYEQASHDLIPAPPPRATAPYPGADDTVFLEDENGRCTLDMSGFDQIPDAFVTGFVVAVKGKEDHLKGTFKVGSFTPVLAAPQPTLKPYEEDAYICIVSSLCLPQPSFGVELLGEFLKGNTLEEDEAFAMNTVALVITGNVIGHVSDTPTHQPLAVGEKERIASPMVDADRFLSGVASTLPVFYMPGEHDATNYLLPQQAVNRCLLPSASRNSNFHRVPNPLLCEMAGRSLLATSGQNVEDFALYAAESAKDQQNDNQMLERDPVNKGMYEADGERVLEIMGNMLKNRHIAPTCPDTLGSYPFYERDPFVIERTPHIFVVGNQKEFGARRIRVSTEGSQSSDEGMIVEGEICGTVCLVSAPRFDKSGQAVFVNLRNMECCVREFAVDM 502          
BLAST of Gvermi939.t1 vs. uniprot
Match: R7Q512_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q512_CHOCR)

HSP 1 Score: 460 bits (1183), Expect = 4.820e-155
Identity = 251/504 (49.80%), Postives = 341/504 (67.66%), Query Frame = 0
Query:   18 AHPVERKTIKIDTTPSKRFLLPRKKRYEPQYAHIYFCRLIALRPAVQTAAHASFGPPSE-KLFYANRIVNVSSENAQDVETVIIGVVYRQMQ-KPSILALYEQPSHDLIPSPPRRSSTPYPGSSDSVVLEDENGRCTLDVSALHPMPD--SFVTGFVVAVKGAEDQVTGTFKVSDFCSVMPAPQKALKELQGDSYICLLSSLSLSTPS---FAPEILAEFLKGNTLEEDEGFQ-RNIVAVVIAGNLIGHVE--------AAPVHKPLAVGDKERIASPMVDADRFLSGLASAIPVFHMAGEKDPTNYLLPQQPLHRCLLPSSARNANFKRVANPFACEFGGRLLLATSGQNVSDFALYETQQSKEGNDETTNMEDAEKA--YEPSGERVTDILESMLKNRHVAPTCPDTLGSYPFYE-KDPFVVESTPHIFIAGNQKEFGTKTMK---VRSEASQQSDEQTNVDRDLNGSVRLISVPRFDSTGQAVFVNLKNMDCTIREFGVAM 499
            +HP  R   +ID +P+KRF+LP+KK+YEPQYAH+YF RL +L   V  +A  +FG   E KL Y+ RI +++S++  ++ETV++GV++R M+ KPSILA Y+ PSH+LIP+PP R++  YP   D V +EDE GRC LD+S L       S VTGFV+A+KG ED+ TG+FKV+       APQK+L EL GD +IC+ S+LS         A E+L EFL+G+  E+ EG    NIV +++AGN +  +E            H+PL  G+KER+A+P+V+ DRFLS +AS++PV  M GE DP NYLLPQQP HRCLLPSS+RN N  RV NPF C    R++L TSGQ V+DFALYE Q S         M+D ++A    PSGE+V DIL  ML+NRH+APTCPDTL S+PF +  DPFV+ESTPH+F AGNQ+E+ ++ ++   V+++AS  S    +  +    +VR++SVPRFD TGQ V VNL+ +DC +REF + M
Sbjct:   16 SHPTVRVVSEIDLSPAKRFILPKKKKYEPQYAHVYFSRLKSLTAHVLKSAKLTFGEGEEGKLQYSKRIADIASKD--EMETVVVGVIFRHMKSKPSILAQYDVPSHELIPAPPDRATCTYPRDDDEVFIEDEYGRCALDLSQLDSAVATLSLVTGFVLALKGHEDRRTGSFKVNAISYAGQAPQKSLPELPGDKFICITSALSFGKADGDVLAAELLMEFLRGSAGEDPEGSTCANIVQLIVAGNSVPQLEDTESGPSAVLAAHRPLKSGEKERVAAPIVEVDRFLSVIASSLPVAVMPGEADPVNYLLPQQPFHRCLLPSSSRNENLARVPNPFECSVDKRVILGTSGQPVTDFALYEDQSSV--------MKDGKEAGKLRPSGEKVLDILTLMLQNRHLAPTCPDTLASFPFSDGSDPFVLESTPHVFFAGNQREYASRLVRTPHVQTQASSGSSMDIDGVQGGEKTVRIVSVPRFDETGQVVLVNLRTLDCIVREFALTM 509          
BLAST of Gvermi939.t1 vs. uniprot
Match: M2X386_GALSU (DNA polymerase delta subunit 2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X386_GALSU)

HSP 1 Score: 261 bits (666), Expect = 3.460e-78
Identity = 169/471 (35.88%), Postives = 245/471 (52.02%), Query Frame = 0
Query:   36 FLLPRKKRYEPQYAHIYFCRLIALRPAVQTAAHASFGPPSEKLFYANRIVNVSSENAQDVETVIIGVVYRQMQ-KPSILALYEQPSHDLIPSPPRRSSTPYPGSSDSVVLEDENGRCTLDVSALHPMPDSFVTGFVVAVKGAEDQVTGTFKVSDFCSVMPAPQKALKELQGDSYICLLSSLSLSTP---SFAPEILAEFLKGNT-LEEDEGFQRNIVAVVIAGNLIGHVE----AAPVHKPLAVGDKERI--ASPMVDADRFLSGLASAIPVFHMAGEKDPTNYLLPQQPLHRCLLPSSARNANFKRVANPFACEFGGRLLLATSGQNVSDFALYETQQSKEGNDETTNMEDAEKAYEPSGERVTDILESMLKNRHVAPTCPDTLGSYPFYEKDPFVVESTPHIFIAGNQKEFGTKTMKVRSEASQQSDEQTNVDRDLNGSVRLISVPRFDSTGQAVFVNLKNMDCTIREF 495
            FLL   + Y  QY+ IYFCRL ALRP V+ AA   +   ++ + + +R++++     Q    VIIGV+Y++M  KPSIL  Y +   + +P  P + S  +   SD V+LEDE GR  L+        +  +TG VVAVKG E   +G F V + C     P K  + L  D +I  +S + L  P   S    +  +F+ G    EED  F   I  + + GNL+        A   +    V   +++  A P++ ADRFL+ L+S IPV  + GE DPTN LLPQQPLH  LLPSS++  +F+RV NP+ C   GR +L  SGQN+ D   Y T                      S E    ++E+ML  RH+ PT PDTL  YP+Y++DPFV++  PH+++AGNQ  +GT+ +                    +  VRL+ +P F +TGQ V +NL+ +   + EF
Sbjct:   25 FLL-HSRNYSQQYSQIYFCRLAALRPVVENAARNKW---TDGILFRDRLLHLQ----QGDNCVIIGVIYKEMDLKPSILKEYSKNPAEPVPILPVKPS--FVSDSDVVILEDETGRIRLNFDRCCLGVNILLTGTVVAVKGQETS-SGDFSVDELCFPGIPPLKVPRSLDNDIFILFVSGIGLGAPWNVSMREAMFLDFITGKLGNEEDYHFCSQIGHLFVLGNLLSSAGDETLANKSNDQQTVNSAQQLFNAEPLISADRFLTTLSSTIPVTLLPGEADPTNLLLPQQPLHHSLLPSSSKYNSFRRVTNPYQCCINGRKILVCSGQNIDDACRYSTWDWN------------------SVENRLTVMENMLSFRHLCPTAPDTLPCYPYYDEDPFVLKECPHVYVAGNQHAYGTRLINAN-----------------DCGVRLLCIPDFSTTGQVVLLNLRTLTPQVMEF 449          
BLAST of Gvermi939.t1 vs. uniprot
Match: A0A7S1XHK7_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XHK7_9RHOD)

HSP 1 Score: 240 bits (613), Expect = 3.280e-71
Identity = 153/425 (36.00%), Postives = 226/425 (53.18%), Query Frame = 0
Query:   98 VIIGVVYRQMQ-KPSILALYEQPSHDLIPSPPRRSSTPYP----------GSSDSVVLEDENGRCTLDVSALH----PMPDSFVTGFVVAVKGAEDQVTGTFKVSDFCSV-MP---APQKALKELQGDSYICLLSSLSLSTPSFAP---EILAEFLKGNTLEEDEGFQR---NIVAVVIAGNLIGHVEAAPVHKPLAVGDKERIASPMVDADRFLSGLASAIPVFHMAGEKDPTNYLLPQQPLHRCLLPSSARNANFKRVANPFACEFGGRLLLATSGQNVSDFALYETQQSKEGNDETTNMEDAEKAYEPSGERVTDILESMLKNRHVAPTCPDTLGSYPFYEKDPFVVESTPHIFIAGNQKEFGTKTMKVRSEASQQSDEQTNVDRDLNGSVRLISVPRFDSTGQAVFVNLKNMDCTIREFGV 497
            V++G+V+R +  KPSIL  Y +   D+IP+PP+R    Y           G  DS+ LEDE+GR  LD S L           V+G +VA++G  +++ G   V D C   +P   AP + +     D ++C+LS L+       P   +++ EF+K N    D  FQ+    IV +++AG LI   E   +               + + D  L  +AS+IP+  + G+ DPTN+LLPQQP+++CLLPSS+R    +R  NP+    GGR  L T GQNV DF  Y             +  D+E A     E++  +LE M+++RH+APT PDTL SYPFYE DPF+++  P +F AG+Q +FGTK ++       + D +          VR+ISVP F  T Q V VNL+N++C + +F V
Sbjct:    2 VVVGIVFRHLSLKPSILKEYAKLGADMIPAPPQRDLVSYVKKPNSDGDAGGQEDSIFLEDESGRILLDFSGLEGEAAEKSKYLVSGMIVAIRGRPEKL-GVLLVRDICRAGLPTRSAPCQEVPICDEDRFVCILSGLNFGNADVNPLAIDLVTEFIKTNL--GDSKFQKWGSTIVRLIVAGKLINASENPDIQN-------------LRELDATLVSIASSIPIDLVPGDGDPTNFLLPQQPINKCLLPSSSRFKTLRRAPNPYEAMIGGRRFLGTGGQNVEDFLRY-----------VNDRRDSEGA-----EKILSVLEEMIRSRHLAPTAPDTLASYPFYESDPFIIDRCPDVFFAGSQPQFGTKVVE-------EGDRR----------VRIISVPDFYRTHQIVLVNLRNLNCELVDFVV 377          
BLAST of Gvermi939.t1 vs. uniprot
Match: UPI0007F003C6 (DNA polymerase delta small subunit n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F003C6)

HSP 1 Score: 233 bits (594), Expect = 1.060e-67
Identity = 168/464 (36.21%), Postives = 235/464 (50.65%), Query Frame = 0
Query:   47 QYAHIYFCRLIALRPAVQTAAHASFGPPSEKLFYANRIVNVSSENAQDVETVIIGVVYRQMQ-KPSILALYEQPSHDLIPSPPRRSSTP------YPGSSDSVVLEDENGRCTLDVSALHPMPDSFVTGFVVAVKGAEDQVTGTFKVSDFCSVMPAPQ-KALKELQGDSYICLLSSLSLSTPSFAP---EILAEFLKGNTLEEDEGFQRN---IVAVVIAGNLIGHVEAAPVHKPLAVGDKERIASPMVDADRFLSGLASAIPVFHMAGEKDPTNYLLPQQPLHRCLLPSSARNANFKRVANPFACEFGGRLLLATSGQNVSDFALYETQQSKEGNDETTNMEDAEKAYEPSGERVTDILESMLKNRHVAPTCPDTLGSYPFYEKDPFVVESTPHIFIAGNQKEFGTKTMKVRSEASQQSDEQTNVDRDLNGSVRLISVPRFDSTGQAVFVNLKNMDCTIREFG 496
            QY+ IYF RL  +R  +      S  P  +       ++ +      D E VI+G +Y+ M+ KP +L  Y +           RS TP      +  S D ++LEDE+GR  L  + L P    +VTG VVA+ G E    G F V D       PQ     +L  D Y+  +S L+L + S  P   ++L + + G+  +E E  Q N   IV VVIAG+ +         + LA  D+ R++ P+ + D  L+ +A++IP+  M G  DP+N+ +PQQPLHRCL PSSA    FK   NP + E  G   L TSGQN+ DF  Y      EG++E                   + LE  LK RH+APT P+TLG YPF ++DPF VES PH++ AGNQ +FGT+ +         SD Q          VRLIS+PRF  TG AV +N++N++C    FG
Sbjct:   36 QYSQIYFARLHLMRTLLY-----SLVPTWKPHLPVCTVLGLEG----DKECVIVGTLYKHMKLKPCVLDEYSK----------ERSVTPLVQPHNFVHSDDYLILEDESGRVKLSGTTLSP--SFYVTGIVVALHGKETGA-GDFLVEDVLEAGLPPQLDPPNKLGEDKYVVFVSGLNLGSSSSNPLQVQLLVDHITGHLGDEKE--QNNAAQIVQVVIAGDSVEIPRELLNGQNLAPKDQSRLSEPIKEVDILLTQIAASIPLDIMPGPNDPSNFAMPQQPLHRCLFPSSASYNTFKSCTNPHSFELDGVRFLGTSGQNIHDFEKY-----SEGSEEV------------------EFLERTLKWRHIAPTAPNTLGCYPFTDRDPFFVESCPHVYFAGNQNKFGTRLITG-------SDGQV---------VRLISIPRFSKTGTAVMLNMRNLECHALSFG 436          
BLAST of Gvermi939.t1 vs. uniprot
Match: A0A2P6TSX7_CHLSO (DNA polymerase delta small subunit n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TSX7_CHLSO)

HSP 1 Score: 224 bits (572), Expect = 3.350e-64
Identity = 175/479 (36.53%), Postives = 241/479 (50.31%), Query Frame = 0
Query:   31 TPSKRFLLPRKKRYEPQYAHIYFCRLIALRPAVQTAAHASF-GPPSEKLFYANRIVNVSSENAQDVETVIIGVVYRQMQ-KPSILALYEQPSHDLIPSPPRRSSTPYPGSSDSVVLEDENGRCTLDVSALHPMPDSFVTGFVVAVKGAEDQVTGTFKVSDFCSVMPAPQKALKELQGDSYICLLSSLSLSTPSFAP---EILAEFLKGNTLEEDE--GFQRNIVAVVIAGNLIGHVEAAPVHKPLAVGDKERIAS---PMVDADRFLSGLASAIPVFHMAGEKDPTNYLLPQQPLHRCLLPSSARNANFKRVANPFACEFGGRLLLATSGQNVSDFALYETQQSKEGNDETTNMEDAEKAYEPSGERVTDILESMLKNRHVAPTCPDTLGSYPFYEKDPFVVESTPHIFIAGNQKEFGTKTMKVRSEASQQSDEQTNVDRDLNGSVRLISVPRFDSTGQAVFVNLKNMDCTIREFGVAM 499
            T  +RFLL + K Y+ QYA +YF RL+ +R  V+ AA +++ G P        RI++V     +D E  ++G +Y++M  KPSIL  Y +           R STP     D +VLEDE  R TL   A  P+ +  VTG V AV+G   Q  G F+V+        PQ  L   + D Y+ L+S L +S    +P   ++L ++L G    E E  G    I  VV+AG L+    A  + +P A     + A+   P+ D D  LS LA+A+PV  M G  DP NY LPQQPLHRCL P +A  ++ +R  NP   +  G   L TSGQNV D   Y            +++ED              IL  +L+ RH+APT PDTL +YP+YE DPF++ES+PH+  AG Q  F T   +V                   GSVRL+++P F STG  V +NL  + C    F  AM
Sbjct:   45 TRDERFLL-KHKEYDRQYAQLYFYRLLQMRAHVEAAARSAWPGIP------VVRILSVP----EDGEVAVVGTLYKEMALKPSILDEYVKDRSLGQQLGRARFSTP----EDRLVLEDEGARVTLCGDAC-PVGEC-VTGVVAAVRGRV-QPNGDFEVTGCVYAGAPPQPPLPRCE-DKYVALVSGLGVSDGEGSPLRLQLLVDYLGGLLGGEGERSGVVGRIARVVVAGGLLKTSSA--LSQPTAYSSVRQQAAALGPLRDVDMALSELAAAVPVDIMPGAGDPANYTLPQQPLHRCLFPGAAAYSSLQRATNPHDFDVDGVTFLGTSGQNVDDIYRY------------SDIEDR-----------AAILGKLLQWRHLAPTAPDTLAAYPYYESDPFILESSPHVLFAGGQPAFATGVAEVAG----------------GGSVRLVAIPNFCSTGCVVLLNLSTLACQPIYFDDAM 463          
BLAST of Gvermi939.t1 vs. uniprot
Match: A0A7R9Y024_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y024_9VIRI)

HSP 1 Score: 224 bits (571), Expect = 5.580e-64
Identity = 157/495 (31.72%), Postives = 250/495 (50.51%), Query Frame = 0
Query:   14 ARNGAHPVERKTIKIDTTPSKRFLLPRKKRYEPQYAHIYFCRLIALRPAVQTAAHASFGPPSEKLFYANRIVNVSSENAQDVETVIIGVVYRQMQ-KPSILALYEQPSHDLIPSPPRRSSTPYPGSSDSVVLEDENGRCTLDVSALHPMPDSFVTGFVVAVKGAEDQVTGTFKVSDFCSVMPAPQKALKELQGD-SYICLLSSLSLSTPSFAP---EILAEFLKGNT-LEEDEGFQRNIVAVVIAGNLIGHVEAAPVHKP-----LAVGDKERIASPMVDADRFLSGLASAIPVFHMAGEKDPTNYLLPQQPLHRCLLPSSARNANFKRVANPFACEFGGRLLLATSGQNVSDFALYETQQSKEGNDETTNMEDAEKAYEPSGERVTDILESMLKNRHVAPTCPDTLGSYPFYEKDPFVVESTPHIFIAGNQKEFGTKTMKVRSEASQQSDEQTNVDRDLNGSVRLISVPRFDSTGQAVFVNLKNMDCTIREFGV 497
            A  GA  +ER  + + +  + RF+LP  ++Y  QYA +YF RL+A R  ++ AA+A+      K     R+V+++S   +  E  I G +++ M+ +P IL  Y +   D   S        Y G  D++VLE+E GR  L  SA+    +  VTG V   +G  +   G F V +        QK     +G+ SYI L+S L + +PS  P    +L +FL G     E++     I  V++AGN +   EA+          +A  +  ++ +P+ + D  L+ LASA+P+  M GE DP N  LPQQP+H  L P ++  + ++ V NP+  + GG  ++ TSGQ + D + +    S+                        ++LE+ L+ RH+APT PD+L SYP+ ++DPFVV+ +PH++ AGNQ++F TK ++                      VRL+ VP F +TGQ V VN   ++C + E+ V
Sbjct:   23 ANGGAAQLER--VALPSATNGRFVLPTPRQYSRQYAQVYFSRLMAQRAPLEAAANAAGWQSHAK---KKRVVDLASAIGE--ECYITGTLFKNMKLQPRILDEYLK---DGGLSTGAAKPDSYVGDDDTIVLEEETGRVALVGSAVET--ERLVTGVVATARGKVN-AKGEFVVEEMLFPGVPKQKPRPMEEGEASYIALVSGLGVGSPSSNPLAASLLVDFLTGQLGSAEEQKLCSRIARVIVAGNSLCVPEASAQGSGRGGGGMAAREAAKLGAPLAELDLLLAELASAVPIDLMPGESDPANVALPQQPMHSALFPRASTYSTYRPVTNPYTADVGGVSIVGTSGQALDDLSKFTKGVSR-----------------------LELLEATLRWRHLAPTAPDSLASYPYSDEDPFVVQDSPHVYFAGNQRQFDTKLVE---------------------GVRLVCVPDFATTGQIVLVNTHTLECRLMEWSV 460          
BLAST of Gvermi939.t1 vs. uniprot
Match: A0A833V2J6_9POAL (DNA polymerase delta small subunit isoform X2 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833V2J6_9POAL)

HSP 1 Score: 223 bits (567), Expect = 9.420e-64
Identity = 163/491 (33.20%), Postives = 249/491 (50.71%), Query Frame = 0
Query:   11 MSSARNGAHPVERKTIKIDTTPSKRFLLPRKKRYEPQYAHIYFCRLIALRPAVQTAAHASFGPPSEKLFYANRIVNVSSENAQDVETVIIGVVYRQMQ-KPSILALYEQPSHDLIPSPPRRSSTPYPGSSDSVVLEDENGRCTLDVSALHPMPDSFVTGFVVAVKGAEDQVTGTFKVSDFCSVMPAPQKALK-ELQGDSYICLLSSLSLSTPSFAP---EILAEFLKGNTLEEDEG-FQRNIVAVVIAGNLIGHVEAAPVHKPLAVGDKERIASPMVDADRFLSGLASAIPVFHMAGEKDPTNYLLPQQPLHRCLLPSSARNANFKRVANPFACEFGGRLLLATSGQNVSDFALYETQQSKEGNDETTNMEDAEKAYEPSGERVTDILESMLKNRHVAPTCPDTLGSYPFYEKDPFVVESTPHIFIAGNQKEFGTKTMKVRSEASQQSDEQTNVDRDLNGSVRLISVPRFDSTGQAVFVNLKNMDCTIREF 495
            M+ +  G  P+ERK   +     +RF +  +K    QY+HIY+ RL  +R  +Q     SF    +     N ++ +        E +I+G +Y+ M+ KPS+L  Y +     IP     + T    + D ++LEDE+GR  L    L P+  +FVTG VVA+ G E    G F V DF      PQ     + + D Y+  +S LS+ + +F P   ++  + + G+  +E+E      IV +VIAGN +   +     + +A  D  ++  P+ + D FL+ L SA+PV  M G  DP NY LPQQPLHRCL   ++    F    NP   +      + TSGQN+ D  LY+                    Y  + +R+ + +E  L+ RH+APT P+TLG YP+ +KDPF++ES PH++  GNQ+++ T+ +       Q  D+Q         SVRLIS+PRF  TG AV +NL+N++C    F
Sbjct:    1 MADSEMGEAPLERKQA-VYRNLDERFEIQGEKYKGQQYSHIYYVRLHQMRSLLQ-----SFISKWKPHLPVNSVLGLEEGK----ECIIVGTLYKHMKLKPSVLDEYSK-ERSAIPLVKPHNFT---STDDHLILEDESGRVKLAGPMLTPL--AFVTGIVVAIHGKETS-KGDFFVEDFLDAGLPPQVDRPLDSREDKYVAFVSGLSVGSSAFNPLQFQLFVDHITGHLGDENEQRISSQIVRLVIAGNSMHIQQGYFSGQSVAPKDHAKLTEPIRELDIFLTQLVSALPVDIMPGCNDPANYNLPQQPLHRCLFSGASAYNTFTSCTNPHQFDLDNVQFIGTSGQNIDD--LYK--------------------YSDAKDRI-EFMERTLRWRHLAPTAPNTLGCYPYTDKDPFLIESCPHVYFVGNQEKYETRLL-------QGPDKQ---------SVRLISIPRFCETGVAVMLNLRNLECHALTF 435          
BLAST of Gvermi939.t1 vs. uniprot
Match: A0A1Y2G8R5_9FUNG (DNA polymerase alpha/epsilon subunit B-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2G8R5_9FUNG)

HSP 1 Score: 223 bits (567), Expect = 1.250e-63
Identity = 154/472 (32.63%), Postives = 229/472 (48.52%), Query Frame = 0
Query:   38 LPRKKRYEPQYAHIYFCRLIALRPAVQTAAHASFGPPSEKLFYANRIVNVSSENAQDVETVIIGVVYRQMQ-KPSILALYEQPSHDLIPSPPRRSSTPYPGSSDSVVLEDENGRCTLDVSALHPMPDSFVTGFVVAVKGAEDQVTGTFKVSDFCSVMPAPQKALKELQ---GDSYICLLSSLSLSTPSFAP---EILAEFLKGNTLEEDEGFQ-RNIVAVVIAGNLIGH---VEAAPVHKPLAVGDKERIASPMVDADRFLSGLASAIPVFHMAGEKDPTNYLLPQQPLHRCLLPSSARNANFKRVANPFACEFGGRLLLATSGQNVSDFALYETQQSKEGNDETTNMEDAEKAYEPSGERVTDILESMLKNRHVAPTCPDTLGSYPFYEKDPFVVESTPHIFIAGNQKEFGTKTMKVRSEASQQSDEQTNVDRDLNGSVRLISVPRFDSTGQAVFVNLKNMDCTIREFGVA 498
            L + + Y  QYAH+YF RL+ +RP V   A   +     K  +  ++++V         + ++G VY +M+ KP+IL    +  H +   P R     Y G  DSV LEDE+GR  L   A+  M   FVTG ++ V G+ED+  G FKV D C  +P PQ+ +++++    D ++ L+S L +   SF P   ++LAE+L G   +  E  +  NIV V+ AGN I     VE     K            P+   D FL  + S IPV  M GE DP++  +PQQP+H  LLPS+ R + F  V NP+        LL TSGQ + D   Y   +++                        ++    L+  H+APT PDTL  YPF +KDPF+++  PHI+  GNQ +F T+ +                D+D     R++ +P F STG    VNL+ ++C    F  +
Sbjct:   26 LVKTRDYRLQYAHLYFTRLVLMRPKVLEQAKKQWNSLPSKPKHVEKVLDVQPGEI----SYLVGTVYTEMKLKPNILNDITK-DHWIAAQPDRPK---YIGDDDSVYLEDESGRVKLTGMAV--MDGLFVTGIIMGVLGSEDE-NGDFKVVDVCYTLPPPQEPIRQMETDEADKHVALVSGLGIGGKSFKPLELDLLAEYLTGEIGDIKEQTECANIVRVIFAGNSIVTPEIVEDDSKGKKYGYDRASYFTEPIKILDNFLREVCSGIPVDIMPGESDPSSVTIPQQPIHHALLPSARRYSTFHNVTNPYWSSIDDITLLGTSGQTIDDIYKYAKSENR-----------------------LEMAVKTLQWGHMAPTAPDTLWCYPFKDKDPFIMKQRPHIYFIGNQDKFATELIS---------------DKD-GQHTRVVMLPSFASTGTIALVNLRTLECRSVSFSTS 447          
BLAST of Gvermi939.t1 vs. uniprot
Match: UPI00053CA56F (DNA polymerase delta small subunit isoform X1 n=3 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053CA56F)

HSP 1 Score: 221 bits (564), Expect = 2.530e-63
Identity = 164/488 (33.61%), Postives = 240/488 (49.18%), Query Frame = 0
Query:   21 VERKTIKIDTTPSKRFLLPRKKRYEPQYAHIYFCRLIALRPAVQTAAHASFGPPSEKLFYANRIVNVSSENAQDVETVIIGVVYRQMQ-KPSILALYEQPSHDLIPSPPRRSSTP------YPGSSDSVVLEDENGRCTLDVSALHPMPDSFVTGFVVAVKGAEDQVTGTFKVSDFCSVMPAPQ-KALKELQGDSYICLLSSLSLSTPSFAP---EILAEFLKGNTLEEDE-GFQRNIVAVVIAGNLIGHVEAAPVHKPLAVGDKERIASPMVDADRFLSGLASAIPVFHMAGEKDPTNYLLPQQPLHRCLLPSSARNANFKRVANPFACEFGGRLLLATSGQNVSDFALYETQQSKEGNDETTNMEDAEKAYEPSGERVTDILESMLKNRHVAPTCPDTLGSYPFYEKDPFVVESTPHIFIAGNQKEFGTKTMKVRSEASQQSDEQTNVDRDLNGSVRLISVPRFDSTGQAVFVNLKNMDCTIREFG 496
            ++RK    ++   +RF + ++     QY+ IYF RL  +R    T  H S  P  +       ++ +        E VIIG +Y+ M+ KP IL  Y +           RS+TP      +    D +VLEDE+GR  L  +AL P   ++VTG VVA+ G E    G F V D       PQ +   +L  D Y+ L+S L + + S  P   ++L + + G+  +E+E G    IV V+IAGN +         + LA  D+  ++ P+ + D  L+ +A+ + V  M G  DP N+ LPQQPL+RCL P SA    F+   NP + +      L TSGQNV D   Y   + K                        + +E  LK RH+APT P+TLG YPF ++DPF++ES PH++  GNQ +FGT  +K        S+ Q         +VRLI +P+F  TG AV VNL+N++C    FG
Sbjct:    9 LQRKQSSYESLQDERFEIQKEMYRGQQYSQIYFARLHLMR----TLLH-SLVPNWKPHLPVCTVLGIEKGK----ECVIIGTLYKHMKLKPCILDEYSK----------ERSATPLVKPHNFMHPDDHLVLEDESGRVKLGGTALPPA--AYVTGVVVALHGKETSA-GEFFVEDVLEAGLPPQVERPLDLNEDKYVLLVSGLGIGSNSSNPLQSQLLVDHITGHLGDEEEQGIAAQIVHVIIAGNSVEFPRKLFNGQNLASKDQSTLSEPVKELDILLAQIAAGVSVDIMPGPNDPANFSLPQQPLNRCLFPGSAAYNTFRSCTNPHSFDLDNARFLGTSGQNVDDLDKYSEAKDK-----------------------LEFMERTLKWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQVKFGTCLLKG-------SEGQ---------AVRLICIPKFCETGVAVAVNLRNLECHTVSFG 435          
The following BLAST results are available for this feature:
BLAST of Gvermi939.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J331_9FLOR2.510e-23064.54DNA polymerase delta small subunit n=1 Tax=Gracila... [more]
R7Q512_CHOCR4.820e-15549.80Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2X386_GALSU3.460e-7835.88DNA polymerase delta subunit 2 n=1 Tax=Galdieria s... [more]
A0A7S1XHK7_9RHOD3.280e-7136.00Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
UPI0007F003C61.060e-6736.21DNA polymerase delta small subunit n=1 Tax=Daucus ... [more]
A0A2P6TSX7_CHLSO3.350e-6436.53DNA polymerase delta small subunit n=1 Tax=Chlorel... [more]
A0A7R9Y024_9VIRI5.580e-6431.72Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A833V2J6_9POAL9.420e-6433.20DNA polymerase delta small subunit isoform X2 n=1 ... [more]
A0A1Y2G8R5_9FUNG1.250e-6332.63DNA polymerase alpha/epsilon subunit B-domain-cont... [more]
UPI00053CA56F2.530e-6333.61DNA polymerase delta small subunit isoform X1 n=3 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.60.21.50coord: 180..498
e-value: 1.2E-80
score: 272.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
IPR007185DNA polymerase alpha/delta/epsilon, subunit BPFAMPF04042DNA_pol_E_Bcoord: 210..438
e-value: 8.5E-34
score: 116.7
IPR040663DNA polymerase delta subunit, OB-fold domainPFAMPF18018DNA_pol_D_Ncoord: 47..188
e-value: 2.0E-23
score: 82.9
IPR024826DNA polymerase delta/II small subunit familyPANTHERPTHR10416DNA POLYMERASE DELTA SUBUNIT 2coord: 20..495

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:1280401..1281900 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi939.t1Gvermi939.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 1280401..1281900 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi939.t1 ID=Gvermi939.t1|Name=Gvermi939.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=500bp
MRSKETSDLSMSSARNGAHPVERKTIKIDTTPSKRFLLPRKKRYEPQYAH
IYFCRLIALRPAVQTAAHASFGPPSEKLFYANRIVNVSSENAQDVETVII
GVVYRQMQKPSILALYEQPSHDLIPSPPRRSSTPYPGSSDSVVLEDENGR
CTLDVSALHPMPDSFVTGFVVAVKGAEDQVTGTFKVSDFCSVMPAPQKAL
KELQGDSYICLLSSLSLSTPSFAPEILAEFLKGNTLEEDEGFQRNIVAVV
IAGNLIGHVEAAPVHKPLAVGDKERIASPMVDADRFLSGLASAIPVFHMA
GEKDPTNYLLPQQPLHRCLLPSSARNANFKRVANPFACEFGGRLLLATSG
QNVSDFALYETQQSKEGNDETTNMEDAEKAYEPSGERVTDILESMLKNRH
VAPTCPDTLGSYPFYEKDPFVVESTPHIFIAGNQKEFGTKTMKVRSEASQ
QSDEQTNVDRDLNGSVRLISVPRFDSTGQAVFVNLKNMDCTIREFGVAM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007185DNA_pol_a/d/e_bsu
IPR040663DNA_pol_D_N
IPR024826DNA_pol_delta/II_ssu