Gvermi9380.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi9380.t1
Unique NameGvermi9380.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length277
Homology
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BLAST of Gvermi9380.t1 vs. uniprot
Match: A0A2V3J3C1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3C1_9FLOR)

HSP 1 Score: 348 bits (892), Expect = 7.070e-118
Identity = 178/278 (64.03%), Postives = 213/278 (76.62%), Query Frame = 0 
Query:    1 MTNRRQRSSLASSSMPAA--KKEEQVQVAAPEPS-EKQARMVDEWILKYHIEWSGLTLNPFYHELSMSMLSPTQYARWLLDRASISLAIVEGTKRTADILRNTMPGTEFPLLRVAAEDARHFTETALLAGLDINASFRLSIPARGLVQLIEASTAPDAPPAVAVTAVWVYMLASWQAWDLCTARVDSLPPEFGDVAKQITRQEAIKGIHETERLLELLLKSSESSDQFEKAGKTFEEVVKRASSVLDHTMFLSDSSNIPVCTCGRKGHYPEQCTFKSH 275
            M NRRQRSS A++S P A  KKE+Q Q   P    EKQ R VD WILKYH EWSGLTLN FY +LS   LS  QY RWLLD  S S+A+VEG KRTADI+R ++P  EFPLLR+A EDAR  TE A+L GLDIN+  RLS P   LVQLIEASTAPDAPPAVA+TA+W YMLA+WQ+W+LC +R + +P +F  +A+ ITR++  +GI ETER+L+ L KS E  DQFEKAGKTFEE+ +R+++VL+HT  +SD SNIPVCTCGRKGHYP QCTFKSH
Sbjct:    1 MQNRRQRSSSAAASSPFALQKKEDQEQDTIPNVLVEKQVRFVDNWILKYHNEWSGLTLNTFYQDLSKCALSAPQYTRWLLDITSTSIAVVEGAKRTADIVRASVPDIEFPLLRIATEDARFLTEFAILWGLDINSDARLSSPGARLVQLIEASTAPDAPPAVAITAIWAYMLATWQSWELCCSRGEPIPAQFERIAQHITRKDTFEGIDETERILDRLFKSPEVGDQFEKAGKTFEEIARRSAAVLEHTTLMSDESNIPVCTCGRKGHYPGQCTFKSH 278
The following BLAST results are available for this feature:
BLAST of Gvermi9380.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3C1_9FLOR7.070e-11864.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016084Haem oxygenase-like, multi-helicalGENE3D1.20.910.10coord: 33..240
e-value: 3.7E-8
score: 35.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24230contigScGOVlb_24230:322964..323794 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi9380.t1Gvermi9380.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24230 322964..323794 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi9380.t1 ID=Gvermi9380.t1|Name=Gvermi9380.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=277bp
MTNRRQRSSLASSSMPAAKKEEQVQVAAPEPSEKQARMVDEWILKYHIEW
SGLTLNPFYHELSMSMLSPTQYARWLLDRASISLAIVEGTKRTADILRNT
MPGTEFPLLRVAAEDARHFTETALLAGLDINASFRLSIPARGLVQLIEAS
TAPDAPPAVAVTAVWVYMLASWQAWDLCTARVDSLPPEFGDVAKQITRQE
AIKGIHETERLLELLLKSSESSDQFEKAGKTFEEVVKRASSVLDHTMFLS
DSSNIPVCTCGRKGHYPEQCTFKSHF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016084Haem_Oase-like_multi-hlx