Gvermi9364.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi9364.t1
Unique NameGvermi9364.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length179
Homology
BLAST of Gvermi9364.t1 vs. uniprot
Match: A0A2V3IDL6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDL6_9FLOR)

HSP 1 Score: 195 bits (496), Expect = 6.410e-61
Identity = 106/169 (62.72%), Postives = 117/169 (69.23%), Query Frame = 0
Query:   11 MAYKAMRRAVMEPIHDAKLREQAEKVYGAIGLPLPDPRTEEQKMRPRSHGGFELTSTFAPTPDAPKLNVVHGPLANDDGRMALKKEVVGFPMPGAAAEARMRAENPTRASSAMLVDDEEYEQVADSPYXXXXXXXXXXXXXXXXXXXXXXXXSKTKNTT-SAMQVQVAS 178
            MAYKAMRR+VMEPIHDAKLREQAEKVY AIG+ LP  R++EQKM PRSHGGFEL STF PTPDAPKLNVVHGPLA  D +M LKKEVVGFP+P A AEARMRAE P      M VDDEEYE V + PY                         ++K  T SAMQV+VA+
Sbjct:    1 MAYKAMRRSVMEPIHDAKLREQAEKVYKAIGMDLPGERSKEQKMPPRSHGGFELVSTFVPTPDAPKLNVVHGPLAYKDDKMTLKKEVVGFPIPCAGAEARMRAEIPAARRRTMDVDDEEYEDVTERPYFYPRRERQGVGIRKKRRERKQRVKKRSKPMTGSAMQVEVAT 169          
BLAST of Gvermi9364.t1 vs. uniprot
Match: R7QTR0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTR0_CHOCR)

HSP 1 Score: 172 bits (435), Expect = 1.650e-51
Identity = 90/140 (64.29%), Postives = 107/140 (76.43%), Query Frame = 0
Query:    1 MAKSKRSKVKMAYKAMRRAVMEPIHDAKLREQAEKVYGAIGLPLPDPRTEEQKMRPRSHGGFELTSTFAPTPDAPKLNVVHGPLANDDGRMALKKEVVGFPMPGAAAEARMRAENPT--RASSAMLVDDEEYEQVADSPY 138
            M KSKRSKVKMAYKAMRRAVMEP HDA+LRE+A KVY AIGLPLP+ RT E++M+PR HGG EL STF  TP  PKLNVVHGP A DD  M + K ++GFP+ GA A A+MRAE P   +   A+ VD++E+EQV  +PY
Sbjct:    1 MGKSKRSKVKMAYKAMRRAVMEPKHDAQLREKAAKVYEAIGLPLPEERTAEERMKPRMHGGSELVSTFVLTPKGPKLNVVHGPNAADDPLMRIPKGIIGFPIVGAGARAKMRAELPVPQKRVRAIDVDEDEFEQVEATPY 140          
BLAST of Gvermi9364.t1 vs. uniprot
Match: A0A7S3A3V1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3V1_9RHOD)

HSP 1 Score: 69.7 bits (169), Expect = 8.950e-12
Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = 0
Query:    1 MAKSKRSKVKMAYKAMRRAVMEPIHDAKLREQAEKVYGAIGLPLPDPRTEEQKMRPRSHGGFELTSTFAPTPDAPKLNVVHGPLA----NDDGRM 91
            MAK  RSKVK AY+A++R  ME ++  KL ++   ++   G        E++  R   HGG +L +TF P  + PKLNVVHGPLA    N D R+
Sbjct:    1 MAKGLRSKVKRAYRALKREKMEGVYKKKLDDRVSSLHKKAGFEQAAVMEEDKPERIIRHGGVQLGTTFVPDHERPKLNVVHGPLAETAENSDARV 95          
The following BLAST results are available for this feature:
BLAST of Gvermi9364.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IDL6_9FLOR6.410e-6162.72Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QTR0_CHOCR1.650e-5164.29Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3A3V1_9RHOD8.950e-1242.11Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24230contigScGOVlb_24230:243385..243921 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi9364.t1Gvermi9364.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24230 243385..243921 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi9364.t1 ID=Gvermi9364.t1|Name=Gvermi9364.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=179bp
MAKSKRSKVKMAYKAMRRAVMEPIHDAKLREQAEKVYGAIGLPLPDPRTE
EQKMRPRSHGGFELTSTFAPTPDAPKLNVVHGPLANDDGRMALKKEVVGF
PMPGAAAEARMRAENPTRASSAMLVDDEEYEQVADSPYFYPRRERRGGGI
KKKRRERKTRKKSKTKNTTSAMQVQVAS*
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