Gvermi9360.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi9360.t1
Unique NameGvermi9360.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length297
Homology
BLAST of Gvermi9360.t1 vs. uniprot
Match: A0A2V3IDR1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDR1_9FLOR)

HSP 1 Score: 369 bits (946), Expect = 1.700e-125
Identity = 157/276 (56.88%), Postives = 209/276 (75.72%), Query Frame = 0
Query:   21 QAEVAPCRMDDEFCSCKWAERDRETCWMQNAPEDNGQFQCEEVSCLSSGWMCSCDDREYVCPVKQTQNTVFLDDSSGVNLCRNDTTRMAGPPILQLGSVEIGLSKKGMLSNACNELALWYNGDMVANYGSHDDPMITCANGEEEIKRRSNHTAVELKRGDLIAFRFKHASYHCFTSMAKFRINGRFMNSLQDDVVTRYARQHSTNWYDPSFRPVYPDNSVNLDNVTEATEPSSIFIPLRRKFFSTGETIQPGEDYWHPPDGSRDHAIGNFYFRIQL 296
            +AEV  CR DD++CSCKW+  D + CW         +F+C +  C  +GW+CSC+ REYVCP+K+ ++  +L + +    CRN T+ MAGPP+L+LGS+EIGLS+KGM+SNACNEL  +YNG+ + NYG   +P I CAN + EI RR+NHT++ELKRGDLIAFRFKHASYHCFTS+AKF I+G+ ++S+  +VV RY  +H+  W+ PSF P+YP N+ ++ NVTE TE + +F+PLRR+FF TGE I PG+DYWHPPDG RDH +GNFYFRIQL
Sbjct:   21 KAEVGHCRKDDDYCSCKWSGLDADMCWYPMGDNTQEEFECAKAPCGKTGWICSCEGREYVCPMKRVEHPTYLQEMNDKTYCRNMTSEMAGPPLLRLGSLEIGLSRKGMVSNACNELVWFYNGEFMVNYGDDSNPEINCANVDYEIDRRANHTSIELKRGDLIAFRFKHASYHCFTSIAKFYIDGKRLSSMDKEVVIRYTTKHTPGWHHPSFTPMYPKNNDSVYNVTEGTEAAGVFVPLRRRFFETGEKIMPGKDYWHPPDGGRDHKVGNFYFRIQL 296          
BLAST of Gvermi9360.t1 vs. uniprot
Match: A0A2V3J1C3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1C3_9FLOR)

HSP 1 Score: 226 bits (577), Expect = 8.620e-70
Identity = 118/283 (41.70%), Postives = 167/283 (59.01%), Query Frame = 0
Query:   15 LLSTPLQAEVAPCRMDDEFCSCKWAERDRETCWMQNAPEDNGQFQCEEVSCLSSGWMCSCDDREYVCPVKQTQNTVFLDDSSGVNL-CRNDTTRMAGPPILQLGSVEIGLSKKGMLSNACNELALWYNGDMVANYGSHDDPMITCANGEEEIKRRSNHTAVELKRGDLIAFRFKHASYHCFTSMAKFRINGRFMNSLQDDVVTRYARQHSTNWYDPSFRPVYPDNSVNLDNVTEATEPSSIFIPLRRKFFSTGETIQPGEDYWHPPDGSRDHAIGNFYFRIQL 296
            +L   L  E  PCR D ++CSCK+    +  C +      + +  C E  C + GW C+C  R ++CP+K    +V +D  SG  L CR++T + AG P ++LGS  IG+SKK +L N C ++  W NG+++  YG  + P I   N + E+ RR  HTA+ELKRGDL+AFRF+ ASYHCFT ++   +NG+ +      +  R+ARQ S +W +PSF P       NL +  +   P+  F+PLR  FFS G TI  G DYW  P G+RDH  GNFY+R+QL
Sbjct:   13 ILVAALHGETIPCRYDTKYCSCKYGSERQGRC-LDRIGGTSSRGPCIERYCRA-GWTCACLGRTHLCPLKNATRSV-VDSLSGSQLYCRDETIQGAGLPSIKLGSWTIGISKKALLENECKDMKWWLNGELLGEYG--ETPRINRFNVDYELLRRGTHTAIELKRGDLLAFRFRDASYHCFTHVSDIEVNGQIVRLGDSSLSIRFARQFSQDWNEPSFTP-------NLASDEDLALPTD-FLPLRTNFFSDGRTINAGWDYWTQPAGTRDHEKGNFYYRVQL 282          
BLAST of Gvermi9360.t1 vs. uniprot
Match: A0A2V3J2G8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2G8_9FLOR)

HSP 1 Score: 172 bits (435), Expect = 2.610e-48
Identity = 104/289 (35.99%), Postives = 155/289 (53.63%), Query Frame = 0
Query:   16 LSTPLQAEVAPCRMDDEFCSCKWAERDRETCWMQNAPEDNGQFQCEEVSCLSSGWMCSCDDREYVC-----PVKQTQNTVFLDDSSGVNLCRNDTTRMAGPPILQLGSVEIGLSKKGMLSNACNELALWYNGDMVANYGSHDDPMITCANGEEEI-KRRSNHTAVELKRGDLIAFRFKHASYHCFTSMAKFRINGRFMNSLQDDVVTRYARQHSTNWYDPSFRPVYPDNSVNLDNVTEATEPS-SIFIPLRRKFFSTGETIQPGEDYWHPPDG-SRDHAIGNFYFRIQL 296
            LS  +  +V PCR D++ CSCK  + ++ TCW + A       +C    C + GW C+C  R +VC     PV   +N    D S  V  C   +  +     L LG ++   S+KG L++ CNE+A W+NG+++   G+     IT  +  +++ K R  HT +EL+ GDLIAFRF+ +SY+C+  + +F ING  +NS      T YAR+ + +W+ PS+     D ++  D     TEP    F+PLR    S   +I PG DYW P D  S D+   N+YFRIQ+
Sbjct:   13 LSQTVFGDVGPCRYDEDRCSCKLGKANQGTCWDKIAESPG---ECSRRYCRA-GWTCACGGRTHVCYRANKPVNSLKNPA--DISKSVAECVTKSFPLVAGHELTLGRLKFHFSRKGALADDCNEVAWWHNGELL---GNRKPVSITSPSDVDKVLKDREEHTLLELRPGDLIAFRFRDSSYYCYKHLTEFVINGTSVNSEALGFTTHYAREFTKDWFSPSY--ALTDQNMGEDE----TEPDIRKFLPLRTTKLSNSVSIVPGSDYWEPRDSNSPDNKPSNWYFRIQV 286          
BLAST of Gvermi9360.t1 vs. uniprot
Match: R7QB89_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB89_CHOCR)

HSP 1 Score: 108 bits (271), Expect = 8.250e-26
Identity = 58/146 (39.73%), Postives = 82/146 (56.16%), Query Frame = 0
Query:  153 DPMITCANGEEEIKRRSNHTAVELKRGDLIAFRFKHASYHCFTSMAKFRINGRFMNSLQDDVVTRYARQHSTNWYDPSFRPVYPDNSVNLDNVTEATEPSSI--FIPLRRKFFSTGETIQPGEDYWHPPDGSRDHAIGNFYFRIQL 296
            +P IT AN   ++ RR+ H  +EL++ D IAFRFK+ SYHC+   +   +NG  + + +  + T Y+R H++NW+ PSF P          NV +  + +SI  F PLR    S G     GED W   DGS DH I NFYFR+ +
Sbjct:    7 EPQITGANLGAQMVRRTKHVLLELQKNDTIAFRFKNGSYHCYNHFSNLNVNGVNVTTQESSIETLYSRGHTSNWFMPSFVP----------NVKQDLDEASITDFTPLRPTM-SNGAPDVIGEDNWKAVDGSEDHMISNFYFRMTI 141          
The following BLAST results are available for this feature:
BLAST of Gvermi9360.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IDR1_9FLOR1.700e-12556.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1C3_9FLOR8.620e-7041.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J2G8_9FLOR2.610e-4835.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QB89_CHOCR8.250e-2639.73Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24230contigScGOVlb_24230:235640..236635 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi9360.t1Gvermi9360.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24230 235640..236635 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi9360.t1 ID=Gvermi9360.t1|Name=Gvermi9360.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=297bp
MSRYSVAILIASFFLLSTPLQAEVAPCRMDDEFCSCKWAERDRETCWMQN
APEDNGQFQCEEVSCLSSGWMCSCDDREYVCPVKQTQNTVFLDDSSGVNL
CRNDTTRMAGPPILQLGSVEIGLSKKGMLSNACNELALWYNGDMVANYGS
HDDPMITCANGEEEIKRRSNHTAVELKRGDLIAFRFKHASYHCFTSMAKF
RINGRFMNSLQDDVVTRYARQHSTNWYDPSFRPVYPDNSVNLDNVTEATE
PSSIFIPLRRKFFSTGETIQPGEDYWHPPDGSRDHAIGNFYFRIQL*
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