Gvermi924.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi924.t1 vs. uniprot
Match: A0A2V3J5W6_9FLOR (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W6_9FLOR) HSP 1 Score: 247 bits (630), Expect = 6.270e-75 Identity = 126/215 (58.60%), Postives = 161/215 (74.88%), Query Frame = 0
Query: 5 LLLLVTLFGFWAISCAVPTVIRQETDTD-TCPVDGVCFALDQSGSISINYPDLQAFVVAVAREIETNSPSTLYSAFGFANNVNTIQSSTSQLESEFVPAVNAPVTPIGSTNMFAGLNACFTELSDLTGTKVIILLTDGVDNGSPFAIDLAPTIKDQGIGIITVGIGNGVSSQYLQQLATSPEFFIASTFTTLPIEVFKLTQMLCELPAVSPLPTD 218
LL+ + F ++S AVPTV+RQ+ ++ TCP+D VCFA+DQSGSI +NY +Q FV+ VAREIE+ S TL+SA+GF+N+V TIQ+STSQLE+ FVPAV A P GSTNM+AGLN CF +++D G KVIILLTDG DN P A LAP IKD GI I+TVGIG GVS+ YL+QLA++P+FFI F+TLP EV L+QM C+ SP P++
Sbjct: 3 LLIFLAFSAFLSLSIAVPTVVRQDDSSEETCPIDSVCFAMDQSGSIFLNYGAIQNFVIEVAREIESRSFGTLFSAYGFSNSVTTIQTSTSQLETLFVPAVTASGPPSGSTNMYAGLNGCFNDIADQPGNKVIILLTDGQDNAFPLASSLAPVIKDAGITIVTVGIGAGVSAPYLEQLASTPDFFIQLMFSTLPSEVVSLSQMTCDAVDASPEPSE 217
BLAST of Gvermi924.t1 vs. uniprot
Match: A0A2V3IFK7_9FLOR (Collagen alpha-6(VI) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK7_9FLOR) HSP 1 Score: 201 bits (511), Expect = 8.290e-59 Identity = 100/214 (46.73%), Postives = 147/214 (68.69%), Query Frame = 0
Query: 8 LVTLFGFWAISCAVPTVIRQETDT----DTCPVDGVCFALDQSGSI-SINYPDLQAFVVAVAREIETNSPSTLYSAFGFANNVNTIQSSTSQLESEFVPAVNAPVTPIGSTNMFAGLNACFTELSDLTGTKVIILLTDGVDNGSPFAIDLAPTIKDQGIGIITVGIGNGVSSQYLQQLATSPEFFIASTFTTLPIEVFKLTQMLCELPAVSPLP 216
+++L +A + ++P I Q+ T + C ++ VCF LD+SGSI S Y Q FV++V+R I + + TLYSA+GFA++ + IQ+STS LE FVP +N GSTNM+AGLNACF E++ G +VI+L+TDG DNG+P A LAPT+K G+ I+T+G+G+GV YL+ LAT+P FFI STF++LP +V ++ + C++ VSP+P
Sbjct: 7 ILSLLALFACAVSIPFSIHQDLPTNDTSEDCSINSVCFVLDESGSIQSSEYIVEQQFVISVSRVISSRTNGTLYSAYGFASSASVIQASTSNLEGTFVPVINQSQQSGGSTNMYAGLNACFNEVNGNAGNRVIVLITDGGDNGNPLAEALAPTVKAAGVAIVTIGVGSGVDEDYLRSLATTPAFFIPSTFSSLPADVVRVAESSCDVVEVSPVP 220
BLAST of Gvermi924.t1 vs. uniprot
Match: A0A2V3IQ26_9FLOR (Matrilin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ26_9FLOR) HSP 1 Score: 127 bits (319), Expect = 1.570e-30 Identity = 68/188 (36.17%), Postives = 112/188 (59.57%), Query Frame = 0
Query: 25 IRQETDTDTCPVDGVCFALDQSGSIS-INYPDLQAFVVAVAREIETNSPSTLYSAFGFANNVNTIQSSTSQLESEFVPAVNAPVTPIGSTNMFAGLNACFTELSDLTGTKVIILLTDGVDNGSPFAIDLAPTIKDQGIGIITVGIGNGVSSQYLQQLATSPEFFI-ASTFTTLPIEVFKLTQMLCELP 210
+R + +CP VCFA+D+SGSIS ++ + +VA+A+E+ T +P + SA GF++ IQS T+ + EFV A+ G+T+ A L C T+++ ++I+LLTDG DN PF +A IK+ GI IIT+GIG+G+++ L+ +A+SP+ FI F++ + + +C +P
Sbjct: 65 LRITSAQRSCPPLNVCFAIDESGSISPTDFIEQTEAIVAIAQELSTFAPGSTLSAVGFSSFAELIQSPTTDINGEFVQAIQGNSQLGGTTSSGAALQLCQTQIASAADPRIIVLLTDGADNTMPFGTSVAGGIKNNGIIIITIGIGSGINAPSLRSIASSPDLFIFVDDFSSFEDSIEVIVDTICPVP 252
BLAST of Gvermi924.t1 vs. uniprot
Match: Q7XZ43_GRIJA (Alpha 1 type VII collagen (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ43_GRIJA) HSP 1 Score: 82.8 bits (203), Expect = 1.870e-15 Identity = 53/161 (32.92%), Postives = 85/161 (52.80%), Query Frame = 0
Query: 34 CPVDGVCFALDQSGSIS-INYPDLQAFVVAVAREIETNSPSTLYSAFGFAN--NVNTIQSSTSQLESE---FVPAVNAPVTPIGSTNMFAGLNACFTELSDLTGTKVIILLTDGVDNGSPFAIDLAPTIKDQGIGIITVGIGNGVSSQYLQQ-LATSPEFF 187
CP +C+A+D+S SIS + L A +V + T +P + ++A F+ N + S L S+ F+ A+ A G T+ GLN C EL KVI+L+TDGVDN +P +D+ IK G + VGIG+ ++ L+ +++SP+ +
Sbjct: 25 CPPAKICYAIDESESISGTEFAQLNAALVEITNTFSTAAPGSSFAAVDFSGLQNGGGVGEVVSPLTSDVTTFLAALAANPKRGGFTSSGTGLNLCDQELDGQAQPKVILLITDGVDNRNPIGVDVEAAIKANGNTVAVVGIGDNLNDDDLRDTISSSPDLY 185
BLAST of Gvermi924.t1 vs. uniprot
Match: A0A7S1XH88_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XH88_9RHOD) HSP 1 Score: 84.7 bits (208), Expect = 3.790e-15 Identity = 61/185 (32.97%), Postives = 95/185 (51.35%), Query Frame = 0
Query: 34 CPVDGVCFALDQSGSIS-INYPDLQAFVVAVAREIETNSPS----TLYSAFGFANNVNTIQSSTSQLESEFVPAVNAPVTPIGSTNMFAGLNACFTELSDLTGTKVIILLTDGVDNGSPFAIDLAPTIKD-QGIGIITVGIG-NGVSSQYLQQLATSPEFFIAST-FTTLPIEVFKLTQMLCELP 210
CP++ +CFA+D+SGSIS + V VA IE+ S S T Y A GF+++ N + T+ + F V++ G T+ L C + G +VI+L+TDG + A A IK ++T+G+G ++ L+ LA+ PEFF+ ST F+TL + K+ Q +C P
Sbjct: 23 CPINSICFAIDESGSISGTQFIAENTAVKNVADSIESISISLGISTTYGAVGFSSSANVVSPLTNL--ATFKGNVDSNPKSGGGTSYGPALQQCRNLIGPQAGVRVIVLVTDGQPSDPAAATSEANIIKSLPNTFLVTIGVGLTSTATTLLRDLASGPEFFVGSTDFSTLTTQTGKILQAICPPP 205
BLAST of Gvermi924.t1 vs. uniprot
Match: A0A7S1XGG3_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XGG3_9RHOD) HSP 1 Score: 83.6 bits (205), Expect = 1.160e-14 Identity = 72/223 (32.29%), Postives = 107/223 (47.98%), Query Frame = 0
Query: 1 MRSYLLLLVTLFGFWAISCAVPTVIRQETDTDTCPVDGVCFALDQSGSIS-INYPDLQAFVVAVAREIETNSP----STLYSAFGFANNVNTIQSSTSQLESEFVPAVNAPVTPIGSTNMFA-GLNACFTELSDLTGTKVIILLTDGVDNGSPFAIDLAPTIKDQ-GIGIITVGIGNGVSSQ-YLQQLATSPEFFI-ASTFTTLPIEVFKLTQMLCELPAVSP 214
M LL LV G W + + P C V+ +CFA+D+SGS+S ++ ++ VV VA I++ S + A F NV + T+ L S F VN + G +A L AC + LS TG +VI+LLTDG + + A A IK ++TVG+ S + LQ LA+ PE+F+ A++F L + + +C P V P
Sbjct: 22 MALTLLHLVVFVGVWVAAHSQP-----------CAVNSICFAIDESGSVSQADFDKEKSAVVDVATRIQSIDTALGISPRFGAIAFDGNVQPVSPLTTSL-SAFTTTVNGFSSRFGGDTRYAPALQACQSLLSGQTGVRVIVLLTDGAPSDATAATTAANAIKSTPNTFLVTVGVNLAASGKTLLQGLASGPEYFVDATSFVDLQQKTGDIVAAMCP-PPVCP 231
BLAST of Gvermi924.t1 vs. uniprot
Match: A0A7S1XDR4_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDR4_9RHOD) HSP 1 Score: 78.6 bits (192), Expect = 3.380e-13 Identity = 63/185 (34.05%), Postives = 94/185 (50.81%), Query Frame = 0
Query: 34 CPVDGVCFALDQSGSISIN-YPDLQAFVVAVAREIETNSP----STLYSAFGFANNVNTIQSSTSQLESEFVPAVNAPVTPIGSTNMFAGLNACFTELSDLTGTKVIILLTDGVDNGSPFAIDLAPTIKDQ-GIGIITVGIGNGVS-SQYLQQLATSPEFFI-ASTFTTLPIEVFKLTQMLCELP 210
C ++ +CFA+D+SGSIS + + D V+ VAR ++ S T Y+A F + +T+ S T E N P T C + LS +G + I+L+TDG + + AI A +K IITVG+G S + +LQ LA+ P+FF AS+F+ L E K+ Q +C P
Sbjct: 33 CTINNICFAIDESGSISDSAFVDETNVVLQVARALDMISKMQGIQTKYAAIDFGASESTVSSLTDVASFE-QRVSNNPHRKDPDTLYAPAFERCGSLLSGASGVRAIVLVTDGAPSDTTAAIVAANALKSMPNTFIITVGVGLTSSRASFLQSLASGPDFFAEASSFSALKFE--KVVQAICPPP 214
BLAST of Gvermi924.t1 vs. uniprot
Match: A0A7S2Z9E6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2Z9E6_9RHOD) HSP 1 Score: 67.4 bits (163), Expect = 4.630e-9 Identity = 65/211 (30.81%), Postives = 92/211 (43.60%), Query Frame = 0
Query: 19 CAVPTVIRQETDTDTCPVDGVCFALDQSGSI-------SINYPDLQAFVVAVARE-IETNSPSTL-YSAFGFANNVNTIQSSTSQLE-SEFVPAVNAPVTPIGSTNMFAGLNACFTELSDLTGT-KVIILLTDGVDN-GSPFAIDL---APTIKDQGIGIITVGIGNGVSSQYLQQLATSPEFFIASTFTTLPIEVFKLTQMLCELPAVSP 214
C V + Q D DT CFA+D S S+ S+ Q VA+ E IE N L Y F ++ I T+ SE V + P G TN+ + L+ C LS +V+IL+TDGV G+ + DL IKD GI I+T+G G+ + + L L+TS F + T + L + +CE P
Sbjct: 201 CTVELLCSQSCDIDTA---AFCFAVDVSQSLWDPVIGGSVEAFQSQIDFVAMGIEAIENNGGVNLEYGVVAFGDDGEVIADLTTAANASEAVSEIAVPTVKFG-TNIESALSTCEAVLSGSPKEFRVLILITDGVPTVGNTSSADLEAQGDAIKDAGIQIVTIGAGDFIDANLLNNLSTSGSFISVDSITDFTSALNDLLEEVCERSLTVP 407
BLAST of Gvermi924.t1 vs. uniprot
Match: A0A815Z0K5_9BILA (Hypothetical protein n=2 Tax=Adineta steineri TaxID=433720 RepID=A0A815Z0K5_9BILA) HSP 1 Score: 67.0 bits (162), Expect = 8.270e-9 Identity = 55/199 (27.64%), Postives = 83/199 (41.71%), Query Frame = 0
Query: 32 DTCPVD---GVCFALDQSGSISINYPDLQ-AFVVAVAREIETNSPSTLYSAFGFANNVNTIQSSTSQLE-SEFVPAVNAPVTPIGSTNMFAGLNACFTELSDLTGTK--------VIILLTDGVDNGSPFAIDLAPTIKDQGIGIITVGIGNGVSSQYLQQLATSP---EFFIASTFTTLPIEVFKLTQMLCELPAVSP 214
DTC + + +D SGS+ + LQ FV + ++ T ++ NV T+ + E + + VN GSTN L T S G + +I L+TDG + I+ A +KD GI I+TVGIGN + L T P +F S + L ++ + T +C PA P
Sbjct: 308 DTCSQELKLDLGIVMDSSGSVGSSNFQLQLTFVRDLLSKVNVGENKTHVGIINYSTNVQTLTNLNKDYELRQKIQQVNKANFIGGSTNTAGALQQANTVFSPANGLRPEGEGAQPLIFLITDGQSDDQTATINAAAVLKDNGIHIVTVGIGNSLDLVELTAACTPPAYENYFPMSNYAALDQKIAQFTSKVCSEPAPIP 506
BLAST of Gvermi924.t1 vs. uniprot
Match: UPI0009E292AE (collagen alpha-6(VI) chain-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E292AE) HSP 1 Score: 64.7 bits (156), Expect = 5.200e-8 Identity = 59/182 (32.42%), Postives = 85/182 (46.70%), Query Frame = 0
Query: 39 VCFALDQSGSIS-INYPDLQAFVVAVAREIETNSPSTLYSAFGFANNVNTIQSSTSQLESE-FVPAVNAPVTPIGSTNMFAGLNACFTEL------SDLTGTKVIILLTDGVDNGSPFAIDL---APTIKDQGIGIITVGIGNGVSSQYLQQLATSP-EFFIASTFTTLPIEVFKLTQMLCE 208
V F +D SGSIS NY L+ FV +A + + + ++ +T T SE F AV G T + L + +L S K+ LLTDG SP AI L A +K++G+ +IT+GIG V + L+ +A+S + +A TF L EV LT+ CE
Sbjct: 34 VAFLIDSSGSISGKNYRKLKTFVANLAANFNISPRGSRAAVVLYSTGASTDIKFTDFTSSESFGRAVQQLRHHRGFTRIDLALQRAYYDLFSPRADSRYDVPKLAFLLTDGEQTPSPGAIPLDRAARFLKNEGVRLITIGIGKNVKEEELKSIASSDKDVILAETFDGLLEEVEPLTKSACE 215 The following BLAST results are available for this feature:
BLAST of Gvermi924.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi924.t1 ID=Gvermi924.t1|Name=Gvermi924.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=289bpback to top |