Gvermi9070.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi9070.t1
Unique NameGvermi9070.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length116
Homology
BLAST of Gvermi9070.t1 vs. uniprot
Match: A0A2V3J5T8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5T8_9FLOR)

HSP 1 Score: 173 bits (439), Expect = 6.520e-54
Identity = 77/114 (67.54%), Postives = 94/114 (82.46%), Query Frame = 0
Query:    2 VRRGSSWASARWSEIVRAESNIDTPEDPPTRPLPEQHELGYGVSDFSNWVEKHEDVSSAQALGGFAAIMGLCFVIHRYSTSRVKNGQSSFTKREFPTVENYMPTW-DGARGVRK 114
            +RR S+WAS RWS  VRA+SNIDT +DPPT PLPEQHELG GVSDFSNWVEKHEDVSSA+A+GGF  IMG+C+ IH+Y+ +R K+   +FT+REFPTV+ Y+PTW + A  VRK
Sbjct:   12 IRRASAWASPRWSRAVRAQSNIDTAQDPPTAPLPEQHELGEGVSDFSNWVEKHEDVSSAEAVGGFVFIMGVCYAIHQYAVNRTKSSDPTFTRREFPTVQTYLPTWKEAADSVRK 125          
BLAST of Gvermi9070.t1 vs. uniprot
Match: R7QSD6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSD6_CHOCR)

HSP 1 Score: 113 bits (283), Expect = 7.020e-30
Identity = 55/118 (46.61%), Postives = 79/118 (66.95%), Query Frame = 0
Query:    2 VRRGSSWA-----SARWSEIVRAESNIDTPEDPPTRPLPEQHELGYGVSDFSNWVEKHEDVSSAQALGGFAAIMGLCFVIHRYSTSRVKNGQSSFTKREFPTVENYMPTWDGARGVRK 114
            VR GSS       SA+W+  VR+ESNI TP+DPP+ PLPE HELG G +DF N+V+K+EDVS+ QA+ G  +++   F +++Y+T + +     FT+REFP V+   PTW  +  VR+
Sbjct:   33 VRHGSSGGAPTQLSAQWAAKVRSESNILTPDDPPSAPLPETHELGEGQADFCNFVDKYEDVSTLQAVTGLGSMLLFTFGVYKYATKQARESTPLFTRREFPHVQEDFPTWARSDEVRR 150          
BLAST of Gvermi9070.t1 vs. uniprot
Match: M1VMN3_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VMN3_CYAM1)

HSP 1 Score: 80.5 bits (197), Expect = 4.320e-16
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 0
Query:   12 RWSEIVRAESNIDTPEDPPTRPLPEQHELGYGVSDFSNWVEKHEDVSSAQALGGFAAIMGLCFVIHRYSTSRVKNGQSSFTKREFPTVENYMPTWD 107
            R++  +RAESNI T ++PPT PLPE HE+G G SDF N+++ H D S+ Q + G     G+   +  +S  R +N +  F  R  P  E  +P ++
Sbjct:   51 RYARQIRAESNIQTADEPPTSPLPEGHEVGPGESDFCNYLDDHSDTSNRQVIQGLGLAGGVLACLAAFSVYRYRNSKPQFVPRTVPFWEKEVPGFE 146          
BLAST of Gvermi9070.t1 vs. uniprot
Match: A0A7J7IQH3_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQH3_9RHOD)

HSP 1 Score: 74.7 bits (182), Expect = 3.130e-14
Identity = 38/96 (39.58%), Postives = 53/96 (55.21%), Query Frame = 0
Query:   12 RWSEIVRAESNIDTPEDPPTRPLPEQHELGYGVSDFSNWVEKHEDVSSAQALGGFAAIMGLCFVIHRYSTSRVKNGQSSFTKREFPTVENYMPTWD 107
            R++  +RAESNI+T +DPP  PLPE+HE+G G SDF N+++ H D SS Q + G     GL   +   S  R ++        E P     +P WD
Sbjct:   52 RYARQIRAESNIETIDDPPVAPLPEEHEVGPGESDFCNYLDDHSDTSSRQVIQGLGIAGGLLACVAVVSAYRYRHS-------ERPIEPRTVPFWD 140          
BLAST of Gvermi9070.t1 vs. uniprot
Match: A0A7S0ZCS3_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCS3_9RHOD)

HSP 1 Score: 65.5 bits (158), Expect = 6.870e-11
Identity = 35/85 (41.18%), Postives = 45/85 (52.94%), Query Frame = 0
Query:    4 RGSSWASA-----RWSEIVRAESNIDTPEDPPTRPLPEQHELGYGVSDFSNWVEKHEDVSSAQALGGFAAIMGLCFVIHRYSTSR 83
            RG  W SA     RWS  +R +    T +DPPT PLPE+HEL  G SD+SNW + H D  S   L       G  ++I+ +S  R
Sbjct:   39 RGEPWESAPVFSARWSRKMREDFGNTTVDDPPTGPLPEEHELE-GYSDWSNWYDTHPDTPSIDVLYAMVLFFGPAYLIYLFSKWR 122          
BLAST of Gvermi9070.t1 vs. uniprot
Match: A0A5J4Z8I4_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8I4_PORPP)

HSP 1 Score: 58.2 bits (139), Expect = 4.710e-8
Identity = 35/92 (38.04%), Postives = 50/92 (54.35%), Query Frame = 0
Query:   10 SARWSEIVRAESNIDTPEDPPTRPLPEQHELGYGVSDFSNWVEKH--EDVSSAQALGGFAAIMGLCFVIHRYS--TSRVKNGQSSFTKREFP 97
            S RWS  +R  S + TP +PPT PLP +HE+ +  SD S+  + +  E VS  Q +G F    G  +++H YS  T+  +     FT RE P
Sbjct:   38 SLRWSARMRELSGVKTPTEPPTAPLPIEHEIDFS-SDLSSPYDINLVETVSGYQVVGAFVLFFGSFYILHLYSKHTAMPRYLDPQFTFRETP 128          
The following BLAST results are available for this feature:
BLAST of Gvermi9070.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J5T8_9FLOR6.520e-5467.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QSD6_CHOCR7.020e-3046.61Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M1VMN3_CYAM14.320e-1638.54Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A7J7IQH3_9RHOD3.130e-1439.58Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A7S0ZCS3_9RHOD6.870e-1141.18Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z8I4_PORPP4.710e-838.04Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..115
NoneNo IPR availableTMHMMTMhelixcoord: 57..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:1623499..1623846 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi9070.t1Gvermi9070.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 1623499..1623846 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi9070.t1 ID=Gvermi9070.t1|Name=Gvermi9070.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=116bp
LVRRGSSWASARWSEIVRAESNIDTPEDPPTRPLPEQHELGYGVSDFSNW
VEKHEDVSSAQALGGFAAIMGLCFVIHRYSTSRVKNGQSSFTKREFPTVE
NYMPTWDGARGVRKH*
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