Gvermi907.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi907.t1
Unique NameGvermi907.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length203
Homology
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BLAST of Gvermi907.t1 vs. uniprot
Match: A0A2V3J315_9FLOR (Coiled-coil domain-containing protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J315_9FLOR)

HSP 1 Score: 186 bits (471), Expect = 2.940e-56
Identity = 170/204 (83.33%), Postives = 180/204 (88.24%), Query Frame = 0 
Query:    1 MSEHGASAP--APDQPVGELRRQLSALKLELAREKHRRQAAEEHCRELRRESALNQMRIEEEEEMISNKLMKRLSELKHEKEQIARASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELQRKVQRLSRSTTPGALTPTSSPALSLRSADGSLSRNGSYRLSAPATVPQPALHQPSSAPQPQ 202
            MS+H    P  +    + +LRRQLS+LKL+LAREK RRQAAEEH RE+RRES LNQ+RIEEEEEMISNKLMKRLSELK EKEQIARAS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+ELQRKVQRLSRSTTPGALTPTSSPALSLRSADGSLSRNGSYRLS+ A  P   LHQPSSA Q Q
Sbjct:    1 MSDHNEPQPFSSEQSQIRDLRRQLSSLKLDLAREKQRRQAAEEHVREVRRESTLNQIRIEEEEEMISNKLMKRLSELKQEKEQIARASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQELQRKVQRLSRSTTPGALTPTSSPALSLRSADGSLSRNGSYRLSSAAPFPSAPLHQPSSASQSQ 204
The following BLAST results are available for this feature:
BLAST of Gvermi907.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J315_9FLOR2.940e-5683.33Coiled-coil domain-containing protein 6 n=1 Tax=Gr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..85
NoneNo IPR availableCOILSCoilCoilcoord: 15..49
NoneNo IPR availableCOILSCoilCoilcoord: 94..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..202
IPR019152Protein of unknown function DUF2046PFAMPF09755DUF2046coord: 15..150
e-value: 1.3E-22
score: 80.4
IPR019152Protein of unknown function DUF2046PANTHERPTHR15276H4 D10S170 PROTEIN-RELATEDcoord: 15..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:1201561..1202169 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi907.t1Gvermi907.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 1201561..1202169 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi907.t1 ID=Gvermi907.t1|Name=Gvermi907.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=203bp
MSEHGASAPAPDQPVGELRRQLSALKLELAREKHRRQAAEEHCRELRRES
ALNQMRIEEEEEMISNKLMKRLSELKHEKEQIARASESDSEWVTNSLSQR
LEELQRQKHRIIAAAEEENEYIVNRLNKQLEALRNEKRELQRKVQRLSRS
TTPGALTPTSSPALSLRSADGSLSRNGSYRLSAPATVPQPALHQPSSAPQ
PQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019152DUF2046