Gvermi9033.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi9033.t1
Unique NameGvermi9033.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length139
Homology
BLAST of Gvermi9033.t1 vs. uniprot
Match: A0A2V3J5X7_9FLOR (Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5X7_9FLOR)

HSP 1 Score: 137 bits (345), Expect = 1.700e-39
Identity = 66/104 (63.46%), Postives = 86/104 (82.69%), Query Frame = 0
Query:   35 PVRSCSDITRHEVEKIAKLAQLRLSDDELRKIVPKIQKVIAFFDTINDVDVADVEPMTSAQKLQNVMREDVPHRFSNVDDLMGEAPSTEKDYIRVPKLSSNVSD 138
            PVR CS+I++ EV+ IAKLAQLRLS++E+ K+VP+I+K+I FFDT ++VDV  +EPMTSAQ + NVMRED P RF NVD +M E P +E++YIRVPKLSSN +D
Sbjct:    2 PVRCCSEISKQEVQNIAKLAQLRLSEEEVNKVVPEIKKIINFFDTFSEVDVEGIEPMTSAQDVHNVMREDEPSRFHNVDGMMQEVPCSEREYIRVPKLSSNPTD 105          
BLAST of Gvermi9033.t1 vs. uniprot
Match: R7QQW7_CHOCR (Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQW7_CHOCR)

HSP 1 Score: 113 bits (283), Expect = 5.590e-29
Identity = 54/103 (52.43%), Postives = 76/103 (73.79%), Query Frame = 0
Query:   36 VRSCSDITRHEVEKIAKLAQLRLSDDELRKIVPKIQKVIAFFDTINDVDVADVEPMTSAQKLQNVMREDVPHRFSNVDDLMGEAPSTEKDYIRVPKLSSNVSD 138
            + +C++ T  EV++IA+LAQL LS+DE+  + P++QKVI FF++IN++DV   EPM S     NV+R+DVP  FSNVD +M E P  EK++IRVPK+SS  SD
Sbjct:   93 IEACAEATPEEVKRIARLAQLNLSEDEITTMTPELQKVIGFFNSINEIDVEGFEPMASPSDANNVLRDDVPVMFSNVDAIMDEVPVAEKEFIRVPKISSESSD 195          
BLAST of Gvermi9033.t1 vs. uniprot
Match: A0A7S2ZNI6_9RHOD (Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZNI6_9RHOD)

HSP 1 Score: 94.7 bits (234), Expect = 2.250e-22
Identity = 52/104 (50.00%), Postives = 71/104 (68.27%), Query Frame = 0
Query:   32 ARYPVRSCS---DITRHEVEKIAKLAQLRLSDDELRKIVPKIQKVIAFFDTINDVDVADVEPMTSAQKLQNVMREDVPHRFSNVDDLMGEAPSTEKDYIRVPKL 132
            +R  VR CS   +ITR  VEK AKLA L+LS++E+ +I P++QK+I F + IN VDV+ VEP    + L NV+RED P  F   D+++ EAP  E D+IRVPK+
Sbjct:   20 SRRSVRCCSAKVEITRELVEKTAKLASLQLSNEEVDRITPELQKIIGFVEQINAVDVSGVEPTLRVEDLWNVLREDKPTIFPAQDEMLEEAPLLESDFIRVPKI 123          
BLAST of Gvermi9033.t1 vs. uniprot
Match: A0A327IZ66_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=6 Tax=Bacteria TaxID=2 RepID=A0A327IZ66_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 8.550e-15
Identity = 37/92 (40.22%), Postives = 58/92 (63.04%), Query Frame = 0
Query:   42 ITRHEVEKIAKLAQLRLSDDELRKIVPKIQKVIAFFDTINDVDVADVEPMTSAQKLQNVMREDVPHRFSNVDDLMGEAPSTEKDYIRVPKLS 133
            IT  +VE +AKLA+L L+++E      ++  V+ + D +N+VD +DV+PMT      NVMRED PH+  + + LM  AP  E  + +VPK++
Sbjct:    2 ITVKDVEHVAKLARLELTEEEKELYTKQLGDVLKYVDQMNEVDTSDVKPMTQVIDFVNVMREDEPHQEISKEALMSNAPEEENGFFKVPKIN 93          
BLAST of Gvermi9033.t1 vs. uniprot
Match: A0A836VZY1_9PLAN (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836VZY1_9PLAN)

HSP 1 Score: 73.6 bits (179), Expect = 2.000e-14
Identity = 36/91 (39.56%), Postives = 58/91 (63.74%), Query Frame = 0
Query:   42 ITRHEVEKIAKLAQLRLSDDELRKIVPKIQKVIAFFDTINDVDVADVEPMTSAQKLQNVMREDVPHRFSNVDDLMGEAPSTEKDYIRVPKL 132
            +TR +VEK+A LA+L+L+D+EL     ++ KV+ +   +N+V+   VEPM  A +++NV REDVP R    D  +  AP T+  +  VP++
Sbjct:    5 LTREDVEKVAVLARLKLTDEELETFTAQLGKVLEYVAILNEVETEGVEPMAHAVEMKNVFREDVPGRSLPRDQALANAPKTDGKFFLVPQI 95          
BLAST of Gvermi9033.t1 vs. uniprot
Match: K1ZVN5_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=2 Tax=Bacteria TaxID=2 RepID=K1ZVN5_9BACT)

HSP 1 Score: 73.6 bits (179), Expect = 2.860e-14
Identity = 38/94 (40.43%), Postives = 60/94 (63.83%), Query Frame = 0
Query:   40 SDITRHEVEKIAKLAQLRLSDDELRKIVPKIQKVIAFFDTINDVDVADVEPMTSAQKLQNVMREDVPHRFSNVDDLMGEAP-STEKDYIRVPKL 132
            S I++ +VEK+AKLA+++LS++E+ K   ++ KV  + D +N+VD  +VEP      L+NVMRED    F N +DL+ + P   E   I+V K+
Sbjct:   19 SKISKQQVEKVAKLARVKLSEEEVEKFSNQLDKVFGYMDILNEVDTENVEPTAQVTGLKNVMREDEIENFDNKEDLLKKTPLEVEDGQIKVMKV 112          
BLAST of Gvermi9033.t1 vs. uniprot
Match: A0A1V5XKB5_9FIRM (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Firmicutes bacterium ADurb.Bin193 TaxID=1852885 RepID=A0A1V5XKB5_9FIRM)

HSP 1 Score: 72.8 bits (177), Expect = 3.600e-14
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 0
Query:   42 ITRHEVEKIAKLAQLRLSDDELRKIVPKIQKVIAFFDTINDVDVADVEPMTSAQKLQNVMREDVPHRFSNVDDLMGEAPSTEKDYIRVPKL 132
            ITR +VE +A LA L++S+DE    V  ++ +I+F D ++ VD  DVEP   A +L+NV+REDV     + DDL+  APS       VPK+
Sbjct:    3 ITREDVEYVANLAHLKISEDEQDAFVSDMENIISFADILSGVDTGDVEPTFHALELENVLREDVVTNDYDRDDLLKNAPSKHNGCFEVPKV 93          
BLAST of Gvermi9033.t1 vs. uniprot
Match: A0A517ZSY7_9PLAN (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=2 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZSY7_9PLAN)

HSP 1 Score: 72.4 bits (176), Expect = 5.640e-14
Identity = 33/93 (35.48%), Postives = 60/93 (64.52%), Query Frame = 0
Query:   40 SDITRHEVEKIAKLAQLRLSDDELRKIVPKIQKVIAFFDTINDVDVADVEPMTSAQKLQNVMREDVPHRFSNVDDLMGEAPSTEKDYIRVPKL 132
            +++TR E++++A LA+L+LSD EL  +  ++ +++   D +N++D  DVEPM  A +L+NV R D  H     D+ +  AP ++  Y +VP++
Sbjct:    3 TELTRDEIQRVAVLARLKLSDAELDSLTSELAQILGHMDQLNELDTEDVEPMVHAIELKNVFRADEVHESLPRDEALANAPKSDGRYFQVPQI 95          
BLAST of Gvermi9033.t1 vs. uniprot
Match: A0A660X1Z7_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=2 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A660X1Z7_9BACT)

HSP 1 Score: 72.0 bits (175), Expect = 8.180e-14
Identity = 30/84 (35.71%), Postives = 60/84 (71.43%), Query Frame = 0
Query:   47 VEKIAKLAQLRLSDDELRKIVPKIQKVIAFFDTINDVDVADVEPMTSAQKLQNVMREDVPHRFSNVDDLMGEAPSTEKDYIRVP 130
            V+KIAKLA++ LSD+E++K   ++ K++ + + +N++D ++VEP++  Q++ N  R+DV     ++D+++  AP TE ++ +VP
Sbjct:   10 VKKIAKLARITLSDEEVKKYSEQLAKIVGYVEQLNEIDTSNVEPLSHVQEVVNSFRDDVVKESLDIDEVLKNAPETEGNFFKVP 93          
BLAST of Gvermi9033.t1 vs. uniprot
Match: A0A327J565_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A327J565_9BACT)

HSP 1 Score: 71.2 bits (173), Expect = 1.400e-13
Identity = 35/92 (38.04%), Postives = 58/92 (63.04%), Query Frame = 0
Query:   42 ITRHEVEKIAKLAQLRLSDDELRKIVPKIQKVIAFFDTINDVDVADVEPMTSAQKLQNVMREDVPHRFSNVDDLMGEAPSTEKDYIRVPKLS 133
            IT  +VE +AKLA+L L+++E  K   ++  V+ + D +N+VD ++VEP++   +  NVMR+DV H     + LM  AP  E  + +VPK++
Sbjct:    3 ITVKDVEHVAKLARLELTEEEKEKFTRQLGDVLKYVDQMNEVDTSNVEPLSHPIEFVNVMRDDVIHYEQTKEQLMANAPDEENGFFKVPKIN 94          
The following BLAST results are available for this feature:
BLAST of Gvermi9033.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5X7_9FLOR1.700e-3963.46Glutamyl-tRNA(Gln) amidotransferase subunit C, mit... [more]
R7QQW7_CHOCR5.590e-2952.43Glutamyl-tRNA(Gln) amidotransferase subunit C, mit... [more]
A0A7S2ZNI6_9RHOD2.250e-2250.00Glutamyl-tRNA(Gln) amidotransferase subunit C, mit... [more]
A0A327IZ66_9BACT8.550e-1540.22Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A836VZY1_9PLAN2.000e-1439.56Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
K1ZVN5_9BACT2.860e-1440.43Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A1V5XKB5_9FIRM3.600e-1442.86Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A517ZSY7_9PLAN5.640e-1435.48Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A660X1Z7_9BACT8.180e-1435.71Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A327J565_9BACT1.400e-1338.04Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003837Glu-tRNAGln amidotransferase C subunitPFAMPF02686Glu-tRNAGlncoord: 58..129
e-value: 2.8E-15
score: 56.4
IPR003837Glu-tRNAGln amidotransferase C subunitTIGRFAMTIGR00135TIGR00135coord: 42..132
e-value: 2.3E-23
score: 80.3
IPR003837Glu-tRNAGln amidotransferase C subunitPANTHERPTHR15004UNCHARACTERIZEDcoord: 32..131
IPR003837Glu-tRNAGln amidotransferase C subunitHAMAPMF_00122GatCcoord: 41..134
score: 19.044819
NoneNo IPR availableGENE3D1.10.20.60coord: 40..84
e-value: 2.8E-11
score: 45.2
IPR036113Glu-tRNAGln amidotransferase superfamily, subunit CSUPERFAMILY141000Glu-tRNAGln amidotransferase C subunitcoord: 42..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:1428419..1428905 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi9033.t1Gvermi9033.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 1428419..1428905 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi9033.t1 ID=Gvermi9033.t1|Name=Gvermi9033.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=139bp
MTTGRPAFISSAIAWSKRPSIPFQHISRRPRARYPVRSCSDITRHEVEKI
AKLAQLRLSDDELRKIVPKIQKVIAFFDTINDVDVADVEPMTSAQKLQNV
MREDVPHRFSNVDDLMGEAPSTEKDYIRVPKLSSNVSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003837Asp/Glu-ADT_csu
IPR036113Asp/Glu-ADT_sf_sub_c