Gvermi8913.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8913.t1
Unique NameGvermi8913.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length190
Homology
BLAST of Gvermi8913.t1 vs. uniprot
Match: A0A2V3J2D0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2D0_9FLOR)

HSP 1 Score: 221 bits (563), Expect = 1.400e-70
Identity = 122/188 (64.89%), Postives = 146/188 (77.66%), Query Frame = 0
Query:    1 MQSESLQAFVSQPTRLPVTT--KHARPAICMRQKDSPKKKKATAISRLSKGRRANLDKIAEEYGVTPPRPGDQLDRKYTQKKPTEQKTLYQSVAGAIGVPALNKIEQGLYLLLGGLLLFLLTTGLTISSEAFFKASGKAIPDSLDAFATTVQDLFSPALLSFLVFSSVLGILKQSQLESGASSYSSLK 186
            M   +  AFV  P R+  TT  K  R  +CM+++ +PKKKK  AISRLSK  +A +DKIAE YGV PP+PGDQLDRKYT+ KP E KT+YQS+AGA+GV  LN +EQGLY+ LGGLL FL+T GL ISSEAF+KA+GK IP+SLDAF + VQ  F+PAL+ FLV SSVLGI KQSQLESGASSYSSL+
Sbjct:    1 MHLSNSSAFV--PARVLPTTRSKTLRSCLCMKKRGAPKKKKPNAISRLSKEEKARIDKIAERYGVQPPKPGDQLDRKYTKVKPEEPKTMYQSLAGAVGVETLNLVEQGLYVALGGLLTFLITCGLLISSEAFYKATGKDIPESLDAFTSMVQGYFTPALVIFLVLSSVLGIYKQSQLESGASSYSSLR 186          
BLAST of Gvermi8913.t1 vs. uniprot
Match: R7QM47_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM47_CHOCR)

HSP 1 Score: 137 bits (346), Expect = 1.090e-37
Identity = 88/198 (44.44%), Postives = 119/198 (60.10%), Query Frame = 0
Query:    1 MQSESLQAFVSQPTRLPVTTKH-ARPAICMRQ---KDSPKKKKATAISRLSKGRRANLDKIAEEYGVTPPRPGDQLDRKYTQKKPTEQK-----TLYQSVAGAIGVPALNKIEQGLYLLLGGLLLFLLTTGLTISSEAFFKASGKAIPDSLDAFATTVQDLFSPALLSFLVFSSVLGILKQSQLESGASSYSSLKEKE 189
            M  +S  AF      LP   +  AR  + MR+   K  PKK      S+LSK     ++ +A +YG+  PRPGD LDRK+     ++ +     + YQ +AGA GV ALN  E+ L + LG +L+  L +GL ISSEAFFKASGK IPD+++A   +++  F+P LL FL  SSV G+ KQSQL SGASSYS+L + E
Sbjct:    1 MIPQSAMAFCGPALLLPTGQRRTARVCVTMRKGKRKPGPKK------SQLSKESEERIEGLASKYGIRAPRPGDDLDRKFNSTSSSDPENQPPPSAYQRLAGAFGVEALNAAERVLVVALGTMLIAFLASGLAISSEAFFKASGKEIPDNVEAVLLSLEQAFTPTLLIFLALSSVFGLYKQSQLSSGASSYSALSKDE 192          
BLAST of Gvermi8913.t1 vs. uniprot
Match: A0A7S0ZH70_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZH70_9RHOD)

HSP 1 Score: 79.3 bits (194), Expect = 1.220e-14
Identity = 47/145 (32.41%), Postives = 84/145 (57.93%), Query Frame = 0
Query:   38 KKATAISRLSKGRRANLDKIAEEYGVTPPR---PGDQLDRKYTQKKPTEQ--KTLYQSVAGAIGVPALNKIEQGLYLLLGGLLLFLLTTGLTISSEAFFKASGKAIPDSLDAFATTVQDLFSPALLSFLVFSSVLGILKQSQLES 177
            KK TA  R  K +  +LDK+   YGV  P       ++D+K  +++  E+  ++ Y+ +   +G   L +IE  +   L GL+   +++G+ IS+EA+FK+  K +PD++D     ++ + +P+++ FL+ SSV G+ K  QLES
Sbjct:   97 KKLTAEERKEKNK--DLDKVLARYGVELPSNVTQAQRMDKKLREERAEEETKRSPYEFIVDTLGFETLARIESVIQAALFGLMFVWISSGVAISTEAYFKSQKKPVPDNIDKIVQQLEAVLTPSVVMFLILSSVYGLYKLVQLES 239          
BLAST of Gvermi8913.t1 vs. uniprot
Match: A0A7S0BJL2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BJL2_9RHOD)

HSP 1 Score: 63.9 bits (154), Expect = 4.030e-9
Identity = 39/135 (28.89%), Postives = 71/135 (52.59%), Query Frame = 0
Query:   49 GRRANLDKIAEEYGVTPPRPGDQLDRKYTQKKPTEQK------TLYQSVAGAIGVPALNKIEQGLYLLLGGLLLFLLTTGLTISSEAFFKASGKAIPDSLDAFATT-VQDLFSPALLSFLVFSSVLGILKQSQLE 176
            G+R+  +++  ++GV        L  K  +K+  + +      + Y  +   +G+  + K+++ L       LL    TG+ I +EAFFKA+G+ +P +LD F    V  +F+P+LL F   S  LG+LK +Q++
Sbjct:   70 GKRSAEEEVMAKFGVYQSSGAKVLQEKAERKRRADAEREKNKVSTYSKIVSKLGIDGVGKLDKALSTACTICLLVFFITGILIGAEAFFKATGRDVPQNLDQFLVEGVNYVFTPSLLIFFACSINLGLLKSAQID 204          
The following BLAST results are available for this feature:
BLAST of Gvermi8913.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J2D0_9FLOR1.400e-7064.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QM47_CHOCR1.090e-3744.44Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZH70_9RHOD1.220e-1432.41Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0BJL2_9RHOD4.030e-928.89Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 126..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..170
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..106
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 171..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..125
NoneNo IPR availableTMHMMTMhelixcoord: 106..128
NoneNo IPR availableTMHMMTMhelixcoord: 148..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:501232..501801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8913.t1Gvermi8913.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 501232..501801 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8913.t1 ID=Gvermi8913.t1|Name=Gvermi8913.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=190bp
MQSESLQAFVSQPTRLPVTTKHARPAICMRQKDSPKKKKATAISRLSKGR
RANLDKIAEEYGVTPPRPGDQLDRKYTQKKPTEQKTLYQSVAGAIGVPAL
NKIEQGLYLLLGGLLLFLLTTGLTISSEAFFKASGKAIPDSLDAFATTVQ
DLFSPALLSFLVFSSVLGILKQSQLESGASSYSSLKEKE*
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