Gvermi886.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi886.t1
Unique NameGvermi886.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length306
Homology
BLAST of Gvermi886.t1 vs. uniprot
Match: A0A2V3INT9_9FLOR (Ubiquitin-conjugating enzyme E2 J1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INT9_9FLOR)

HSP 1 Score: 303 bits (775), Expect = 4.430e-99
Identity = 171/317 (53.94%), Postives = 201/317 (63.41%), Query Frame = 0
Query:    1 MQKDSVRRIMAEVKEISRLNEQPQRLFHALPLDSDLFEWHFSVRGPPETAFEGGIYHGRMVLPSDYPLKPPEIILLTPNGRFEVGKRICLSVTSHHQETWQPSWGIRTILTALIGFMPSAAEGLGALDYPDEDRRRLARKSHSFKCDRCGMRPVEQLPPMTAVLGSGGGTTLGTP---STRHAHPRLSTAAPSSTASLSSSVPSSSLSSGINDKEPSSQSXXXXXXXXXXXXXXXXXXXXXXXXXXGSASSD----HTAPRASDAV-VSNSSGRSRR----QTGTRGEEKELLYMAYAIVAIMVAVIARRIVMTIAE 305
            M  D+VRRIMAE+KE+SRLN  P RLFHA PL++DLFEWHFSVRGPP+TAFEGGIYHGR++LP DYPLKPPEIILLTPNGRFEVGKRICLSVT+HHQETWQPSWGIRTILTALIGFMPS AEG+GALDYPD+DRRRLAR+SH F C RCG RPV+ LPPMT       G         S  H+    ST  P+  +   SS                S S                            + S     H +P A  A   +++  R  R    Q     EE+ELLY+AYAI+A+M+AV+ RR++ T+ E
Sbjct:    1 MSNDAVRRIMAELKELSRLNTHPLRLFHASPLETDLFEWHFSVRGPPDTAFEGGIYHGRILLPPDYPLKPPEIILLTPNGRFEVGKRICLSVTAHHQETWQPSWGIRTILTALIGFMPSPAEGVGALDYPDDDRRRLARRSHLFHCGRCGSRPVDHLPPMTQTCSPANGKIQSKALRNSRNHSPSDSSTRPPAQPSQXXSSATHXXXXXXXXXXXXXSLSDRPRHSPNPGGNSSVVPTVTRPDNANSQSESANANAHCSPAAQSATRQTHNDLRPTRPAAAQVVPNREERELLYVAYAIIAMMLAVVVRRVIKTMTE 317          
BLAST of Gvermi886.t1 vs. uniprot
Match: R7QED2_CHOCR (UBC core domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QED2_CHOCR)

HSP 1 Score: 286 bits (731), Expect = 3.370e-91
Identity = 170/350 (48.57%), Postives = 207/350 (59.14%), Query Frame = 0
Query:    1 MQKDSVRRIMAEVKEISRLNEQPQRLFHALPLDSDLFEWHFSVRGPPETAFEGGIYHGRMVLPSDYPLKPPEIILLTPNGRFEVGKRICLSVTSHHQETWQPSWGIRTILTALIGFMPSAAEGLGALDYPDEDRRRLARKSHSFKCDRCGMRPVEQLPPMT----------------------------AVLGSGGGTTLGTPSTRHAHPRLSTAAPSSTASL---SSSVPSSSLSSGINDKEPSS---QSXXXXXXXXXXXXXXXXXXXXXXXXXXGSASSDHT-----------APRASDAVVSNSSGRSRRQTGTRGEEKELLYMAYAIVAIMVAVIARRIVMTIAE 305
            M  D+VRRIMAEVKE S LN  P   FHA PL+SDLFEWHF+VRGPP+TAF  G+YHGR++LP++YPLKPPEIILLTPNGRFEVGKRICLSVT+HHQETWQPSWGIRTILTAL+GFMPS AEG+GALDYPDEDRR LARKSH F+C+RCG  PVEQLPP                              A+  + G T   + S   A P      P S+AS+   + S+P+  ++       PSS    S                           S +S+              P A+   ++   G ++R      +E+ELLY+AYAIV +MVA+IARR+V  I E
Sbjct:   62 MANDAVRRIMAEVKEFSTLNNSPSSFFHAQPLESDLFEWHFTVRGPPDTAFAHGVYHGRILLPAEYPLKPPEIILLTPNGRFEVGKRICLSVTAHHQETWQPSWGIRTILTALVGFMPSKAEGVGALDYPDEDRRGLARKSHGFRCERCGALPVEQLPPREPCPPTSDALASRVDRPSVDSTVQDASQGAITSAVGETIESSKSPTKAKPPEEAPQPESSASIDHTTESIPNGIMAEAQQSIAPSSAVGSSPTLATETYRPELATEPEPDQIDEITPQSTASNPVPNGTVRQRVSKGPPATVPNIAEDPGITQRP---ETQERELLYVAYAIVLLMVAIIARRVVKIIIE 408          
BLAST of Gvermi886.t1 vs. uniprot
Match: A0A5J4Z378_PORPP (Ubiquitin-conjugating enzyme E2 J1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z378_PORPP)

HSP 1 Score: 241 bits (616), Expect = 1.910e-75
Identity = 140/311 (45.02%), Postives = 182/311 (58.52%), Query Frame = 0
Query:    1 MQKDSVRRIMAEVKEISRLNEQPQRLFHALPLDSDLFEWHFSVRGPPETAFEGGIYHGRMVLPSDYPLKPPEIILLTPNGRFEVGKRICLSVTSHHQETWQPSWGIRTILTALIGFMPSAAEGLGALDYPDEDRRRLARKSHSFKCDRCGMR--------PVEQLPPMTAVLGSGGG----TTLGTPSTRHAHPRLSTAAPSSTASLSSSVPSSSLSSGINDKEPSSQSXXXXXXXXXXXXXXXXXXXXXXXXXXGSASSDHTAPRASDAVVSNSSGRSRRQTGTRGEEKELLYMAYAIVAIMVAVIARRI 299
            +Q  +V+RIM EVKE+ R  + P   FHA PL++DLFEWHF+V+GPP+TAF+GG+YHGR++LP++YP+K PEI+LLTPNGRFEVG RICLS+TSHHQETWQPSWGIRTILTALIGFMPS AEGLG+L++P EDRR LA KS +F+C  CG +        P        AV  +GG     +  GT  ++ A    S A PS  A++     S++  S   +  P+                                S +H  P  + A              T   EKEL Y AYA++  +VA+I RR+
Sbjct:    5 LQNAAVKRIMLEVKELQREAQLPGSFFHASPLENDLFEWHFTVKGPPDTAFQGGLYHGRIILPAEYPMKAPEIVLLTPNGRFEVGTRICLSITSHHQETWQPSWGIRTILTALIGFMPSKAEGLGSLNFPAEDRRALAAKSIAFQCPICGCKVKELFEDAPAASCTAAGAVHENGGKEAAESASGTRDSKAAAAAPSDAEPSQPATIRDDASSTAPESASLNARPNQPGVAEVQRH----------------------SMNHAEPVLAQA--------------TNDSEKELKYAAYAVLFFIVAIIVRRV 279          
BLAST of Gvermi886.t1 vs. uniprot
Match: A0A1X6NU25_PORUM (UBC core domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NU25_PORUM)

HSP 1 Score: 236 bits (601), Expect = 2.650e-72
Identity = 107/156 (68.59%), Postives = 128/156 (82.05%), Query Frame = 0
Query:    5 SVRRIMAEVKEISRLNEQPQRLFHALPLDSDLFEWHFSVRGPPETAFEGGIYHGRMVLPSDYPLKPPEIILLTPNGRFEVGKRICLSVTSHHQETWQPSWGIRTILTALIGFMPSAAEGLGALDYPDEDRRRLARKSHSFKCDRCGMRPVEQLPPM 160
            +V+RI+ EV E++  +E+P  LF A PL+SDLFE HF+VRGPPETAFEGG+YHGR++LP +YPLK PEI+ LTPNGRFE G RICLSVTSHH+E WQPSWGIRTILTAL+GFMPS   GLGALDYPD++R+ LA+KS  + C RCG     QLPPM
Sbjct:   18 AVKRILKEVAELAAESERPGALFTAAPLESDLFEMHFTVRGPPETAFEGGLYHGRILLPPEYPLKAPEIMFLTPNGRFETGTRICLSVTSHHEELWQPSWGIRTILTALVGFMPSKPTGLGALDYPDKERKALAKKSLGYVCPRCGAAVATQLPPM 173          
BLAST of Gvermi886.t1 vs. uniprot
Match: A0A7S1XFM3_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFM3_9RHOD)

HSP 1 Score: 223 bits (569), Expect = 1.680e-67
Identity = 101/150 (67.33%), Postives = 121/150 (80.67%), Query Frame = 0
Query:   10 MAEVKEISRLNEQPQRLFHALPLDSDLFEWHFSVRGPPETAFEGGIYHGRMVLPSDYPLKPPEIILLTPNGRFEVGKRICLSVTSHHQETWQPSWGIRTILTALIGFMPSAAEGLGALDYPDEDRRRLARKSHSFKCDRCGMRPVEQLPP 159
            MAE+ E+   N +   LFHA+PL+ DLFEWHF+VRGPP + FEGG+YHGR++LPSDYP K PEI++LTP+GRFEVG RICLSVTS HQETWQPSWGIRTILTA+IGFMPS AEG+GALDY  ++RR LAR+S  F C  C +R  + L P
Sbjct:    1 MAEMMELEEENNKKDALFHAVPLEEDLFEWHFTVRGPPASPFEGGLYHGRLLLPSDYPYKAPEIMILTPSGRFEVGTRICLSVTSFHQETWQPSWGIRTILTAMIGFMPSKAEGIGALDYSADERRVLARRSWDFTCPMCKVRCKDILTP 150          
BLAST of Gvermi886.t1 vs. uniprot
Match: A0A7S0BEZ2_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BEZ2_9RHOD)

HSP 1 Score: 215 bits (547), Expect = 7.430e-65
Identity = 96/149 (64.43%), Postives = 120/149 (80.54%), Query Frame = 0
Query:    5 SVRRIMAEVKEISRLNEQPQRLFHALPLDSDLFEWHFSVRGPPETAFEGGIYHGRMVLPSDYPLKPPEIILLTPNGRFEVGKRICLSVTSHHQETWQPSWGIRTILTALIGFMPSAAEGLGALDYPDEDRRRLARKSHSFKCDRCGMRP 153
            +++RIM EV E+    E+P  +F A PL++D+FEWHFS++GP  T+FEGG+YHGR++LP++YP KPPEII+LTPNGRFE G RICLSVTS H ETWQPSWGIRTILTALI FMP+ + GLGAL YPD+ RR+LA+ S  +KC  CG  P
Sbjct:    9 ALKRIMQEVMEMEAEMEKPNCMFAAKPLETDVFEWHFSIKGPELTSFEGGVYHGRILLPAEYPFKPPEIIMLTPNGRFECGARICLSVTSFHNETWQPSWGIRTILTALIAFMPTNSTGLGALQYPDDHRRQLAKASARWKCLACGAHP 157          
BLAST of Gvermi886.t1 vs. uniprot
Match: A0A8C4B9D0_9TELE (Ubiquitin conjugating enzyme E2 J1 n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4B9D0_9TELE)

HSP 1 Score: 211 bits (536), Expect = 4.740e-63
Identity = 95/159 (59.75%), Postives = 121/159 (76.10%), Query Frame = 0
Query:    5 SVRRIMAEVKEISRLNEQPQRLFHALPLDSDLFEWHFSVRGPPETAFEGGIYHGRMVLPSDYPLKPPEIILLTPNGRFEVGKRICLSVTSHHQETWQPSWGIRTILTALIGFMPSAAEG-LGALDYPDEDRRRLARKSHSFKCDRCGMRPVEQLPPMTA 162
            +V+R+M E  E+     +P   +HA PL+ +LFEWHFSVRGPP++ F+GG+YHGR+VLP +YP+KPP IILLTPNGRFEVGK+ICLS++ HH ETWQPSW IRT L A+IGFMP+  EG +G+LDY  E+RR LA+KS  F CD CG      L P++A
Sbjct:   11 AVKRLMKEAAEL----REPTEHYHAQPLEDNLFEWHFSVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTPNGRFEVGKKICLSISGHHPETWQPSWSIRTALIAIIGFMPTKGEGAIGSLDYTPEERRALAKKSEDFSCDACGCCMRAALLPLSA 165          
BLAST of Gvermi886.t1 vs. uniprot
Match: A0A3Q2D6T4_CYPVA (Ubiquitin conjugating enzyme E2 J1 n=2 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2D6T4_CYPVA)

HSP 1 Score: 209 bits (531), Expect = 1.480e-62
Identity = 94/159 (59.12%), Postives = 120/159 (75.47%), Query Frame = 0
Query:    5 SVRRIMAEVKEISRLNEQPQRLFHALPLDSDLFEWHFSVRGPPETAFEGGIYHGRMVLPSDYPLKPPEIILLTPNGRFEVGKRICLSVTSHHQETWQPSWGIRTILTALIGFMPSAAEG-LGALDYPDEDRRRLARKSHSFKCDRCGMRPVEQLPPMTA 162
            SV+R+M E  E+      P   +HA PL+ +LFEWHFSVRGPP++ F+GG+YHGR+VLP +YP+KPP IILLTPNGRFEVGK+ICLS++ HH ETWQPSW IRT L A+IGFMP+  EG +G+LDY  E+R+ LA+KS  F C+ CG      L P+T+
Sbjct:    8 SVKRLMKEAAEL----RDPTEHYHAQPLEDNLFEWHFSVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTPNGRFEVGKKICLSISGHHPETWQPSWSIRTALIAIIGFMPTKGEGAIGSLDYTPEERKALAKKSQDFCCEACGCSMRSALLPLTS 162          
BLAST of Gvermi886.t1 vs. uniprot
Match: A0A7K9M499_OCETE (UB2J1 enzyme (Fragment) n=1 Tax=Oceanodroma tethys TaxID=79633 RepID=A0A7K9M499_OCETE)

HSP 1 Score: 204 bits (520), Expect = 1.690e-62
Identity = 93/159 (58.49%), Postives = 120/159 (75.47%), Query Frame = 0
Query:    5 SVRRIMAEVKEISRLNEQPQRLFHALPLDSDLFEWHFSVRGPPETAFEGGIYHGRMVLPSDYPLKPPEIILLTPNGRFEVGKRICLSVTSHHQETWQPSWGIRTILTALIGFMPSAAEG-LGALDYPDEDRRRLARKSHSFKCDRCGMRPVEQLPPMTA 162
            +V+R+M E  E+    + P   +HA PL+ +LFEWHF+VRGPP++ F+GGIYHGR+VLP +YP+KPP IILLT NGRFEVGK+ICLS++ HH ETWQPSW IRT L A+IGFMP+  EG +G+LDY  E+RR LA+KS  F C+ CG      L P+T+
Sbjct:    1 AVKRLMKEAAEL----KDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGIYHGRIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQDFCCEMCGTSMKTALLPLTS 155          
BLAST of Gvermi886.t1 vs. uniprot
Match: A0A0S7LLD5_9TELE (UB2J1 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7LLD5_9TELE)

HSP 1 Score: 207 bits (526), Expect = 1.730e-62
Identity = 93/159 (58.49%), Postives = 119/159 (74.84%), Query Frame = 0
Query:    5 SVRRIMAEVKEISRLNEQPQRLFHALPLDSDLFEWHFSVRGPPETAFEGGIYHGRMVLPSDYPLKPPEIILLTPNGRFEVGKRICLSVTSHHQETWQPSWGIRTILTALIGFMPSAAEG-LGALDYPDEDRRRLARKSHSFKCDRCGMRPVEQLPPMTA 162
            +V+R+M E  E+      P   +HA PLD +LFEWHFSVRGPP++ F+GG+YHGR+VLP +YP+KPP IILLTP GRFEVGK+ICLS++ HH ETWQPSW IRT L A+IGFMP+  EG +G+LDY  E+R+ LA+KS  F C+ CG      L P+T+
Sbjct:   11 AVKRLMKEAAEL----RDPTEHYHAQPLDDNLFEWHFSVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTPTGRFEVGKKICLSISGHHPETWQPSWSIRTALIAIIGFMPTKGEGAIGSLDYTPEERKALAKKSQDFCCEACGCSMRSALLPLTS 165          
The following BLAST results are available for this feature:
BLAST of Gvermi886.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INT9_9FLOR4.430e-9953.94Ubiquitin-conjugating enzyme E2 J1 n=1 Tax=Gracila... [more]
R7QED2_CHOCR3.370e-9148.57UBC core domain-containing protein n=1 Tax=Chondru... [more]
A0A5J4Z378_PORPP1.910e-7545.02Ubiquitin-conjugating enzyme E2 J1 n=1 Tax=Porphyr... [more]
A0A1X6NU25_PORUM2.650e-7268.59UBC core domain-containing protein n=1 Tax=Porphyr... [more]
A0A7S1XFM3_9RHOD1.680e-6767.33Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0BEZ2_9RHOD7.430e-6564.43Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A8C4B9D0_9TELE4.740e-6359.75Ubiquitin conjugating enzyme E2 J1 n=1 Tax=Dentice... [more]
A0A3Q2D6T4_CYPVA1.480e-6259.12Ubiquitin conjugating enzyme E2 J1 n=2 Tax=Cyprino... [more]
A0A7K9M499_OCETE1.690e-6258.49UB2J1 enzyme (Fragment) n=1 Tax=Oceanodroma tethys... [more]
A0A0S7LLD5_9TELE1.730e-6258.49UB2J1 (Fragment) n=1 Tax=Poeciliopsis prolifica Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 7..150
e-value: 4.8E-20
score: 82.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..269
NoneNo IPR availablePANTHERPTHR24068:SF168UBIQUITIN-CONJUGATING ENZYME E2 J1coord: 4..300
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 4..300
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 280..300
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..279
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 301..305
NoneNo IPR availableTMHMMTMhelixcoord: 279..301
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 14..119
e-value: 4.4E-18
score: 65.3
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 4..159
score: 30.532101
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 6..146
e-value: 9.34751E-42
score: 139.26
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..160
e-value: 4.2E-45
score: 155.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 6..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:898382..899299 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi886.t1Gvermi886.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 898382..899299 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi886.t1 ID=Gvermi886.t1|Name=Gvermi886.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=306bp
MQKDSVRRIMAEVKEISRLNEQPQRLFHALPLDSDLFEWHFSVRGPPETA
FEGGIYHGRMVLPSDYPLKPPEIILLTPNGRFEVGKRICLSVTSHHQETW
QPSWGIRTILTALIGFMPSAAEGLGALDYPDEDRRRLARKSHSFKCDRCG
MRPVEQLPPMTAVLGSGGGTTLGTPSTRHAHPRLSTAAPSSTASLSSSVP
SSSLSSGINDKEPSSQSSVASSSTAANSSLKSNMTNEHETTTGGSASSDH
TAPRASDAVVSNSSGRSRRQTGTRGEEKELLYMAYAIVAIMVAVIARRIV
MTIAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD