Gvermi8815.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8815.t1
Unique NameGvermi8815.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length84
Homology
[Close]
BLAST of Gvermi8815.t1 vs. uniprot
Match: A0A2V3IWI0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWI0_9FLOR)

HSP 1 Score: 89.4 bits (220), Expect = 1.060e-21
Identity = 40/62 (64.52%), Postives = 50/62 (80.65%), Query Frame = 0 
Query:    1 MDRFHDEHLLPVPEPVQAPRWEVRTCRSRSGAFSHYFVDRLTGKTFTSSEELLIESRSVASS 62
            MD FHDEH LPVP+PV  PRWEVRTCRS +G FSHYFVDRLTGK  T+ ++++ ++ S AS+
Sbjct:    1 MDLFHDEHNLPVPDPVDIPRWEVRTCRSPTGGFSHYFVDRLTGKQCTTPQQMM-QASSPAST 61
The following BLAST results are available for this feature:
BLAST of Gvermi8815.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IWI0_9FLOR1.060e-2164.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:174612..174968 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8815.t1Gvermi8815.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 174612..174968 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8815.t1 ID=Gvermi8815.t1|Name=Gvermi8815.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=84bp
MDRFHDEHLLPVPEPVQAPRWEVRTCRSRSGAFSHYFVDRLTGKTFTSSE
ELLIESRSVASSPASSPASSPASSPVPPPSNKY*
back to top