Gvermi8814.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi8814.t1 vs. uniprot
Match: A0A2V3ITR4_9FLOR (Exosome complex component RRP4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITR4_9FLOR) HSP 1 Score: 478 bits (1229), Expect = 1.050e-168 Identity = 243/293 (82.94%), Postives = 274/293 (93.52%), Query Frame = 0
Query: 1 MDVDTHSSLA--IFRPRRVSDNSDDAVQRLAHVPVTSPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELPCGVHTILGNNGYIFLSSMQKGPPSVEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSICVGARSMRDAA 291
M+ HSS + I RP+R+SDN++ V RL+HVP+TSPG+VIPTEDHSVRARGTLL+ E+GNVLTATRAGVISRVNKLVMVMPLR+RYIPETGDVVVGRVVE+ANKRYK+DVN+TKHAFLLLTAINLPGGV RRRNQEDELNMR+YFKEGDLVSAEVQE+RKDG+VALHTRS+RYGKLS GQLV+VQSELVKRAKKHFHELPCGVHTILGNNG+IFLS +KG S+EMRRRIARV+NS+LALDSEFIAIGPDTIMDVY+TS++NGVEVKDMC PDV++SICVGARSMR+AA
Sbjct: 1 MEAHKHSSASFTILRPKRLSDNAEP-VSRLSHVPITSPGSVIPTEDHSVRARGTLLSCGESGNVLTATRAGVISRVNKLVMVMPLRSRYIPETGDVVVGRVVEIANKRYKMDVNATKHAFLLLTAINLPGGVHRRRNQEDELNMRQYFKEGDLVSAEVQERRKDGSVALHTRSLRYGKLSAGQLVTVQSELVKRAKKHFHELPCGVHTILGNNGFIFLSQTRKGAISLEMRRRIARVANSILALDSEFIAIGPDTIMDVYQTSLANGVEVKDMCTPDVVKSICVGARSMREAA 292
BLAST of Gvermi8814.t1 vs. uniprot
Match: R7Q340_CHOCR (KH_dom_type_1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q340_CHOCR) HSP 1 Score: 365 bits (937), Expect = 2.390e-124 Identity = 185/267 (69.29%), Postives = 219/267 (82.02%), Query Frame = 0
Query: 28 LAHVPVTSPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELPCGVHTILGNNGYIFLSSMQK---GPPSVEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSICVGARSMRDAA 291
L+H+P+T PG+ IPTED SVRARGTLL+ T + VLTAT AGVI+RVNKLVMV PLRA+YIPETGDVV+GRV ++A +R+++DVN+ +HA LLL+A+NLPGG+QRRR +DELNMR +F EGDLVSAEVQEQ DG VALHTRS+RYGKLSGG V VQ ELVKRAKKHFH L CGVH ILGNNGYIFL+ + G + EMR+ +ARV N+VLALD+EFIAIGPDTIM VY+ SI GVE++DM RPD+ IC GARSMR AA
Sbjct: 21 LSHIPITIPGSTIPTEDLSVRARGTLLSTTGSTRVLTATVAGVITRVNKLVMVRPLRAKYIPETGDVVIGRVTDLAGRRWRLDVNAARHAILLLSAVNLPGGIQRRRTYQDELNMRAFFTEGDLVSAEVQEQWDDGCVALHTRSLRYGKLSGGTFVPVQPELVKRAKKHFHRLDCGVHAILGNNGYIFLAERAEKEGGATTPEMRKMVARVRNAVLALDTEFIAIGPDTIMSVYDASIEEGVELRDMTRPDITAKICEGARSMRAAA 287
BLAST of Gvermi8814.t1 vs. uniprot
Match: A0A2V3IQJ5_9FLOR (Exosome complex component RRP4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQJ5_9FLOR) HSP 1 Score: 343 bits (880), Expect = 7.830e-115 Identity = 186/289 (64.36%), Postives = 229/289 (79.24%), Query Frame = 0
Query: 7 SSLAIFRPRRVSDNSDDAVQRLAHVPVTSPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYG----KLSGGQLVSVQSELVKRAKKHFHELPCGVHTILGNNGYIFLSSMQKGPPSVEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSICVGARSMRDAA 291
+S I RP+R+SDN++ AV RL+HVP+TSPG+VI TEDHSVR R TLL+ E+GNVLTATRAG ISRVNKLVMV+PL +RYI ETGDVV GRVVE+A+KRYK+DVN+TK AFLLLTAI LPGGV RRRNQEDELNMR+Y ++ + ++ + + T A + YG + GGQLV++QSELVKRAKKHFHELPCGVH L +NG++FLS +K +++ RI RVSN++LALDSEF AIGPDTIM YETS +NG+EVKDMC PDV++ I +GARSMR+AA
Sbjct: 9 ASFTILRPKRLSDNAE-AVSRLSHVPITSPGSVILTEDHSVRVRRTLLSCGESGNVLTATRAGFISRVNKLVMVVPLCSRYILETGDVVGGRVVEIASKRYKMDVNATKLAFLLLTAIKLPGGVHRRRNQEDELNMREYCISKRVIWSVLKFRNDEKTAASPSTRECYGIESCPVDGGQLVTLQSELVKRAKKHFHELPCGVHMTLRDNGFVFLSQTRKNAILLQIWWRIGRVSNNILALDSEFNAIGPDTIMYAYETSPANGMEVKDMCTPDVVKIIGMGARSMREAA 296
BLAST of Gvermi8814.t1 vs. uniprot
Match: A0A2V3IW84_9FLOR (Exosome complex component RRP4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW84_9FLOR) HSP 1 Score: 336 bits (862), Expect = 4.200e-112 Identity = 185/285 (64.91%), Postives = 217/285 (76.14%), Query Frame = 0
Query: 7 SSLAIFRPRRVSDNSDDAVQRLAHVPVTSPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELPCGVHTILGNNGYIFLSSMQKGPPSVEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSICVGARSMRDAA 291
+S I RP+R+SDN++ AV RL+HVP+TSPG+VI EDHSVRAR TLL+ E+ NVLTAT AGVISRVNKLVMVMPLR+RYI ETG VV GRVVE+A+KRYK+DVN+TK AFLLLTAI LPG V RRRNQEDELNMR+YFKEGDL LV++QSELVKRAKKHFHELPCGVH L NNG++FLS +K +E+ RIARVSN++LALDSEF IGPDTIM YETS++NG+EVKDMC PDV++ I +GAR MR+AA
Sbjct: 9 ASFTILRPKRLSDNAE-AVSRLSHVPITSPGSVILAEDHSVRARRTLLSCGESENVLTATHAGVISRVNKLVMVMPLRSRYILETGVVVGGRVVEIASKRYKMDVNATKIAFLLLTAIKLPGNVHRRRNQEDELNMREYFKEGDL------------------------------LVTLQSELVKRAKKHFHELPCGVHMTLHNNGFVFLSQTRKDAILLEIWWRIARVSNNILALDSEFNEIGPDTIMYAYETSLANGMEVKDMCTPDVVKIIGMGARPMREAA 262
BLAST of Gvermi8814.t1 vs. uniprot
Match: A0A2V3IDP5_9FLOR (Exosome complex component rrp4 n=5 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDP5_9FLOR) HSP 1 Score: 251 bits (640), Expect = 1.570e-80 Identity = 132/175 (75.43%), Postives = 156/175 (89.14%), Query Frame = 0
Query: 7 SSLAIFRPRRVSDNSDDAVQRLAHVPVTSPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQ 181
+S I RP+R+SDN++ AV RL+HVP+TSPG+VI TEDHSVRAR TLL+ E+GNVLTATRAGVISRVNKLVMVMPLR+ YI ETGDVV GRVVE+++K YK+DVN+TK AFLLLTAI LPGGV+RRRNQEDE+NMR+ F+EGDLVSAEVQE+RKDG+VALH R +RY KLSGG+
Sbjct: 9 ASFTILRPKRLSDNAE-AVSRLSHVPITSPGSVILTEDHSVRARRTLLSCGESGNVLTATRAGVISRVNKLVMVMPLRSPYILETGDVVGGRVVEISSKLYKMDVNATKLAFLLLTAIKLPGGVRRRRNQEDEINMRESFREGDLVSAEVQERRKDGSVALHARMLRYRKLSGGR 182
BLAST of Gvermi8814.t1 vs. uniprot
Match: M2XZF0_GALSU (Ribosomal RNA-processing protein 4 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZF0_GALSU) HSP 1 Score: 245 bits (625), Expect = 7.280e-77 Identity = 126/263 (47.91%), Postives = 176/263 (66.92%), Query Frame = 0
Query: 35 SPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELPCGVHTILGNNGYI-----------------FLSSMQKGPPSVEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSI 280
+PG I +++ VR GT++ G LT+T AG++ RVNKLV V+P+RARY E GDV+VGR+ ++ ++R+K+DVNS + A LLL+A+NLPGGVQRRR EDEL MR++F + DL+SAEVQE ++DG + LHTRS++YGKL G +SV +LVKR+KKHFH L CGVH ILG+NGY+ F + ++E R + RV NS+ LD F++I P+TIM +YE +I + V+ M RPD++ I
Sbjct: 32 APGDDILSQESVVRGHGTMV----QGTRLTSTVAGIVERVNKLVAVLPIRARYSAEVGDVIVGRIRDIVSRRWKVDVNSRQDAVLLLSAVNLPGGVQRRRTYEDELKMREFFDQDDLISAEVQELKQDGLIMLHTRSLKYGKLENGIFISVTPQLVKRSKKHFHRLSCGVHIILGDNGYVWIYVDDAAYGEDEEEANFSKRRENDKSNLEQRLSLIRVRNSICILDLYFLSIQPETIMLIYEETIRRNIPVQHMLRPDIINDI 290
BLAST of Gvermi8814.t1 vs. uniprot
Match: A0A1X6NNN7_PORUM (KH_dom_type_1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNN7_PORUM) HSP 1 Score: 247 bits (630), Expect = 8.990e-77 Identity = 149/318 (46.86%), Postives = 186/318 (58.49%), Query Frame = 0
Query: 24 AVQRLAHVPVTSPGAVIPTEDHSVRARGTLLTQT------------------EAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELPCGVHTILGNNGYIFLS-------------SMQKGPPS-------------------VEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSICVGARSMRDAA 291
+ L+HVPV G I E +R GT LT + G L AT GV+ RVN+LV V PLR+RY P+ GDVVV RVV++A KR++ DV +HA L L+A+NLPGGVQRRR DE NMR+ F+EGDL+SAEVQE R DG +ALHTRS++YGKL GG LV LVKR+KKHFH L CGV ILGNNGYI+LS +M++ S VE+R +ARV N++ ALD +F+AI TIMDV++ S + GV+V DM RP V+ I AR R A
Sbjct: 47 STDHLSHVPVVVTGDGIAVEPGFLRGHGTQLTAAGVAXXXXXXXXXXXXXTPDDGRALRATLTGVVKRVNQLVAVAPLRSRYAPQVGDVVVARVVDIAAKRWRCDVAGQQHAALALSAVNLPGGVQRRRTAADERNMRELFEEGDLLSAEVQELRHDGGIALHTRSLKYGKLVGGVLVVASPALVKRSKKHFHLLGCGVWAILGNNGYIWLSPTDPAGGRGAARDAMEEADESDGGAADGGDAAAPVDAELGVEVRLTLARVRNAIAALDQQFVAIHAATIMDVFDASETAGVDVADMSRPAVVELITATARERRVVA 364
BLAST of Gvermi8814.t1 vs. uniprot
Match: A0A3P3YCJ4_PLABS (Ribosomal RNA-processing protein 4 n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YCJ4_PLABS) HSP 1 Score: 235 bits (600), Expect = 5.340e-73 Identity = 131/261 (50.19%), Postives = 172/261 (65.90%), Query Frame = 0
Query: 24 AVQRLAHVPVTSPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELP-CGVHTILGNNGYIFLSSMQKGP---PSVEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSI 280
+++ L P SPG VI TE + GT L E L AT AG + +VNKL+ V PL RY + GDVV+GRV +V +KR+K+D+NS + L+L++I+LPGGVQRRR QED L MR++F+EGDL+SAEVQ DG VALHTRS +YGKL+ GQ V V+ LVKR K+HF LP C V ILGNNGYI+++ G S E R+++ARV S++ALD F+AI PD++MDVY SI GV D+ D + +
Sbjct: 38 SIRSLHANPFVSPGEVITTESGFLWGHGTKLG--EEDKQLRATVAGFVEQVNKLLTVRPLTQRYAGDIGDVVIGRVTQVGDKRWKVDINSRQDGILMLSSIHLPGGVQRRRTQEDSLQMREFFEEGDLISAEVQNFYHDGAVALHTRSSKYGKLNRGQFVVVRQALVKRCKQHFVTLPDCNVDIILGNNGYIWITESSDGSGAGESAERRQQMARVRQSIVALDRMFVAIFPDSVMDVYHDSIDLGVSPADITHRDYIHRV 296
BLAST of Gvermi8814.t1 vs. uniprot
Match: A0A2R6X4H9_MARPO (Ribosomal RNA-processing protein 4 n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X4H9_MARPO) HSP 1 Score: 219 bits (557), Expect = 2.720e-66 Identity = 131/266 (49.25%), Postives = 166/266 (62.41%), Query Frame = 0
Query: 37 GAVIPT--EDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELP-CGVHTILGNNGYIFLSSMQKGPPSV----------------------------EMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDM 271
G IP E+ +R GT Q G +L AT GV+ RVNKLV V PLRARY PETGDVVVGRV EVA KR+K+DVNS + A L+L+A+NLPGG+QRRR DELNMR F E DL+SAEVQ +DG++ LHTRS++YGKL GQLV V L+KR K+HFH+L GV ILG NGY+++S++ + P + E+R RI R++N V L + I PD+I+D YE S+S G E+K M
Sbjct: 43 GDTIPVDYENGYLRGHGT---QVVDGQLL-ATVCGVVERVNKLVSVRPLRARYNPETGDVVVGRVTEVAPKRWKVDVNSRQDAQLMLSAVNLPGGIQRRRTATDELNMRDLFTENDLISAEVQTLHQDGSLHLHTRSLKYGKLESGQLVKVAPYLIKRLKQHFHQLKQYGVQMILGCNGYVWISALPQSTPDIATDQKRANTESLEAAAGTADSQNVEISRELRERICRLANVVRVLGACGFLIHPDSIVDTYEASLSWGTELKHM 304
BLAST of Gvermi8814.t1 vs. uniprot
Match: A9UXQ8_MONBE (Ribosomal RNA-processing protein 4 (Fragment) n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UXQ8_MONBE) HSP 1 Score: 217 bits (552), Expect = 2.770e-66 Identity = 122/267 (45.69%), Postives = 169/267 (63.30%), Query Frame = 0
Query: 33 VTSPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQE-QRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELPCGVHTILGNNGYIFL------------SSMQKGPPSVEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSICVGARS 286
+ PGA I +E +R GT L VL A+ AGV+ VNK+V V P R RY+ E GDVVVGR+VEV+ +R+K+D+ S H L L+++NLPGGV RR++ DEL MR++FKEGDL+SAEVQ+ ++DGT++LHTRS+RYG+L GG V+V L++R+K H H LPCGV +LG NG+I++ +S P +MR RIARV N + AL + I +I+ YE S + VKD+ +PDV+ + A S
Sbjct: 2 IVVPGATITSETGFMRGHGTFLED----EVLYASVAGVVEHVNKVVSVRPARTRYVGEVGDVVVGRIVEVSQRRWKVDIQSRLHGVLKLSSVNLPGGVLRRKSASDELMMREFFKEGDLISAEVQQIYQEDGTLSLHTRSLRYGRLGGGAFVAVSPALIRRSKHHMHVLPCGVAVVLGTNGFIWIGPRLEEDTTRRDASADAMGPDRDMRLRIARVRNCIEALATRHCPIFETSIVYTYEDSQEH--HVKDLLQPDVVYEVTARAYS 262 The following BLAST results are available for this feature:
BLAST of Gvermi8814.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi8814.t1 ID=Gvermi8814.t1|Name=Gvermi8814.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=292bpback to top |