Gvermi8814.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8814.t1
Unique NameGvermi8814.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length292
Homology
BLAST of Gvermi8814.t1 vs. uniprot
Match: A0A2V3ITR4_9FLOR (Exosome complex component RRP4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITR4_9FLOR)

HSP 1 Score: 478 bits (1229), Expect = 1.050e-168
Identity = 243/293 (82.94%), Postives = 274/293 (93.52%), Query Frame = 0
Query:    1 MDVDTHSSLA--IFRPRRVSDNSDDAVQRLAHVPVTSPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELPCGVHTILGNNGYIFLSSMQKGPPSVEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSICVGARSMRDAA 291
            M+   HSS +  I RP+R+SDN++  V RL+HVP+TSPG+VIPTEDHSVRARGTLL+  E+GNVLTATRAGVISRVNKLVMVMPLR+RYIPETGDVVVGRVVE+ANKRYK+DVN+TKHAFLLLTAINLPGGV RRRNQEDELNMR+YFKEGDLVSAEVQE+RKDG+VALHTRS+RYGKLS GQLV+VQSELVKRAKKHFHELPCGVHTILGNNG+IFLS  +KG  S+EMRRRIARV+NS+LALDSEFIAIGPDTIMDVY+TS++NGVEVKDMC PDV++SICVGARSMR+AA
Sbjct:    1 MEAHKHSSASFTILRPKRLSDNAEP-VSRLSHVPITSPGSVIPTEDHSVRARGTLLSCGESGNVLTATRAGVISRVNKLVMVMPLRSRYIPETGDVVVGRVVEIANKRYKMDVNATKHAFLLLTAINLPGGVHRRRNQEDELNMRQYFKEGDLVSAEVQERRKDGSVALHTRSLRYGKLSAGQLVTVQSELVKRAKKHFHELPCGVHTILGNNGFIFLSQTRKGAISLEMRRRIARVANSILALDSEFIAIGPDTIMDVYQTSLANGVEVKDMCTPDVVKSICVGARSMREAA 292          
BLAST of Gvermi8814.t1 vs. uniprot
Match: R7Q340_CHOCR (KH_dom_type_1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q340_CHOCR)

HSP 1 Score: 365 bits (937), Expect = 2.390e-124
Identity = 185/267 (69.29%), Postives = 219/267 (82.02%), Query Frame = 0
Query:   28 LAHVPVTSPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELPCGVHTILGNNGYIFLSSMQK---GPPSVEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSICVGARSMRDAA 291
            L+H+P+T PG+ IPTED SVRARGTLL+ T +  VLTAT AGVI+RVNKLVMV PLRA+YIPETGDVV+GRV ++A +R+++DVN+ +HA LLL+A+NLPGG+QRRR  +DELNMR +F EGDLVSAEVQEQ  DG VALHTRS+RYGKLSGG  V VQ ELVKRAKKHFH L CGVH ILGNNGYIFL+   +   G  + EMR+ +ARV N+VLALD+EFIAIGPDTIM VY+ SI  GVE++DM RPD+   IC GARSMR AA
Sbjct:   21 LSHIPITIPGSTIPTEDLSVRARGTLLSTTGSTRVLTATVAGVITRVNKLVMVRPLRAKYIPETGDVVIGRVTDLAGRRWRLDVNAARHAILLLSAVNLPGGIQRRRTYQDELNMRAFFTEGDLVSAEVQEQWDDGCVALHTRSLRYGKLSGGTFVPVQPELVKRAKKHFHRLDCGVHAILGNNGYIFLAERAEKEGGATTPEMRKMVARVRNAVLALDTEFIAIGPDTIMSVYDASIEEGVELRDMTRPDITAKICEGARSMRAAA 287          
BLAST of Gvermi8814.t1 vs. uniprot
Match: A0A2V3IQJ5_9FLOR (Exosome complex component RRP4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQJ5_9FLOR)

HSP 1 Score: 343 bits (880), Expect = 7.830e-115
Identity = 186/289 (64.36%), Postives = 229/289 (79.24%), Query Frame = 0
Query:    7 SSLAIFRPRRVSDNSDDAVQRLAHVPVTSPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYG----KLSGGQLVSVQSELVKRAKKHFHELPCGVHTILGNNGYIFLSSMQKGPPSVEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSICVGARSMRDAA 291
            +S  I RP+R+SDN++ AV RL+HVP+TSPG+VI TEDHSVR R TLL+  E+GNVLTATRAG ISRVNKLVMV+PL +RYI ETGDVV GRVVE+A+KRYK+DVN+TK AFLLLTAI LPGGV RRRNQEDELNMR+Y     ++ + ++ +  + T A  +    YG     + GGQLV++QSELVKRAKKHFHELPCGVH  L +NG++FLS  +K    +++  RI RVSN++LALDSEF AIGPDTIM  YETS +NG+EVKDMC PDV++ I +GARSMR+AA
Sbjct:    9 ASFTILRPKRLSDNAE-AVSRLSHVPITSPGSVILTEDHSVRVRRTLLSCGESGNVLTATRAGFISRVNKLVMVVPLCSRYILETGDVVGGRVVEIASKRYKMDVNATKLAFLLLTAIKLPGGVHRRRNQEDELNMREYCISKRVIWSVLKFRNDEKTAASPSTRECYGIESCPVDGGQLVTLQSELVKRAKKHFHELPCGVHMTLRDNGFVFLSQTRKNAILLQIWWRIGRVSNNILALDSEFNAIGPDTIMYAYETSPANGMEVKDMCTPDVVKIIGMGARSMREAA 296          
BLAST of Gvermi8814.t1 vs. uniprot
Match: A0A2V3IW84_9FLOR (Exosome complex component RRP4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW84_9FLOR)

HSP 1 Score: 336 bits (862), Expect = 4.200e-112
Identity = 185/285 (64.91%), Postives = 217/285 (76.14%), Query Frame = 0
Query:    7 SSLAIFRPRRVSDNSDDAVQRLAHVPVTSPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELPCGVHTILGNNGYIFLSSMQKGPPSVEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSICVGARSMRDAA 291
            +S  I RP+R+SDN++ AV RL+HVP+TSPG+VI  EDHSVRAR TLL+  E+ NVLTAT AGVISRVNKLVMVMPLR+RYI ETG VV GRVVE+A+KRYK+DVN+TK AFLLLTAI LPG V RRRNQEDELNMR+YFKEGDL                              LV++QSELVKRAKKHFHELPCGVH  L NNG++FLS  +K    +E+  RIARVSN++LALDSEF  IGPDTIM  YETS++NG+EVKDMC PDV++ I +GAR MR+AA
Sbjct:    9 ASFTILRPKRLSDNAE-AVSRLSHVPITSPGSVILAEDHSVRARRTLLSCGESENVLTATHAGVISRVNKLVMVMPLRSRYILETGVVVGGRVVEIASKRYKMDVNATKIAFLLLTAIKLPGNVHRRRNQEDELNMREYFKEGDL------------------------------LVTLQSELVKRAKKHFHELPCGVHMTLHNNGFVFLSQTRKDAILLEIWWRIARVSNNILALDSEFNEIGPDTIMYAYETSLANGMEVKDMCTPDVVKIIGMGARPMREAA 262          
BLAST of Gvermi8814.t1 vs. uniprot
Match: A0A2V3IDP5_9FLOR (Exosome complex component rrp4 n=5 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDP5_9FLOR)

HSP 1 Score: 251 bits (640), Expect = 1.570e-80
Identity = 132/175 (75.43%), Postives = 156/175 (89.14%), Query Frame = 0
Query:    7 SSLAIFRPRRVSDNSDDAVQRLAHVPVTSPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQ 181
            +S  I RP+R+SDN++ AV RL+HVP+TSPG+VI TEDHSVRAR TLL+  E+GNVLTATRAGVISRVNKLVMVMPLR+ YI ETGDVV GRVVE+++K YK+DVN+TK AFLLLTAI LPGGV+RRRNQEDE+NMR+ F+EGDLVSAEVQE+RKDG+VALH R +RY KLSGG+
Sbjct:    9 ASFTILRPKRLSDNAE-AVSRLSHVPITSPGSVILTEDHSVRARRTLLSCGESGNVLTATRAGVISRVNKLVMVMPLRSPYILETGDVVGGRVVEISSKLYKMDVNATKLAFLLLTAIKLPGGVRRRRNQEDEINMRESFREGDLVSAEVQERRKDGSVALHARMLRYRKLSGGR 182          
BLAST of Gvermi8814.t1 vs. uniprot
Match: M2XZF0_GALSU (Ribosomal RNA-processing protein 4 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZF0_GALSU)

HSP 1 Score: 245 bits (625), Expect = 7.280e-77
Identity = 126/263 (47.91%), Postives = 176/263 (66.92%), Query Frame = 0
Query:   35 SPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELPCGVHTILGNNGYI-----------------FLSSMQKGPPSVEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSI 280
            +PG  I +++  VR  GT++     G  LT+T AG++ RVNKLV V+P+RARY  E GDV+VGR+ ++ ++R+K+DVNS + A LLL+A+NLPGGVQRRR  EDEL MR++F + DL+SAEVQE ++DG + LHTRS++YGKL  G  +SV  +LVKR+KKHFH L CGVH ILG+NGY+                 F    +    ++E R  + RV NS+  LD  F++I P+TIM +YE +I   + V+ M RPD++  I
Sbjct:   32 APGDDILSQESVVRGHGTMV----QGTRLTSTVAGIVERVNKLVAVLPIRARYSAEVGDVIVGRIRDIVSRRWKVDVNSRQDAVLLLSAVNLPGGVQRRRTYEDELKMREFFDQDDLISAEVQELKQDGLIMLHTRSLKYGKLENGIFISVTPQLVKRSKKHFHRLSCGVHIILGDNGYVWIYVDDAAYGEDEEEANFSKRRENDKSNLEQRLSLIRVRNSICILDLYFLSIQPETIMLIYEETIRRNIPVQHMLRPDIINDI 290          
BLAST of Gvermi8814.t1 vs. uniprot
Match: A0A1X6NNN7_PORUM (KH_dom_type_1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNN7_PORUM)

HSP 1 Score: 247 bits (630), Expect = 8.990e-77
Identity = 149/318 (46.86%), Postives = 186/318 (58.49%), Query Frame = 0
Query:   24 AVQRLAHVPVTSPGAVIPTEDHSVRARGTLLTQT------------------EAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELPCGVHTILGNNGYIFLS-------------SMQKGPPS-------------------VEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSICVGARSMRDAA 291
            +   L+HVPV   G  I  E   +R  GT LT                    + G  L AT  GV+ RVN+LV V PLR+RY P+ GDVVV RVV++A KR++ DV   +HA L L+A+NLPGGVQRRR   DE NMR+ F+EGDL+SAEVQE R DG +ALHTRS++YGKL GG LV     LVKR+KKHFH L CGV  ILGNNGYI+LS             +M++   S                   VE+R  +ARV N++ ALD +F+AI   TIMDV++ S + GV+V DM RP V+  I   AR  R  A
Sbjct:   47 STDHLSHVPVVVTGDGIAVEPGFLRGHGTQLTAAGVAXXXXXXXXXXXXXTPDDGRALRATLTGVVKRVNQLVAVAPLRSRYAPQVGDVVVARVVDIAAKRWRCDVAGQQHAALALSAVNLPGGVQRRRTAADERNMRELFEEGDLLSAEVQELRHDGGIALHTRSLKYGKLVGGVLVVASPALVKRSKKHFHLLGCGVWAILGNNGYIWLSPTDPAGGRGAARDAMEEADESDGGAADGGDAAAPVDAELGVEVRLTLARVRNAIAALDQQFVAIHAATIMDVFDASETAGVDVADMSRPAVVELITATARERRVVA 364          
BLAST of Gvermi8814.t1 vs. uniprot
Match: A0A3P3YCJ4_PLABS (Ribosomal RNA-processing protein 4 n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YCJ4_PLABS)

HSP 1 Score: 235 bits (600), Expect = 5.340e-73
Identity = 131/261 (50.19%), Postives = 172/261 (65.90%), Query Frame = 0
Query:   24 AVQRLAHVPVTSPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELP-CGVHTILGNNGYIFLSSMQKGP---PSVEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSI 280
            +++ L   P  SPG VI TE   +   GT L   E    L AT AG + +VNKL+ V PL  RY  + GDVV+GRV +V +KR+K+D+NS +   L+L++I+LPGGVQRRR QED L MR++F+EGDL+SAEVQ    DG VALHTRS +YGKL+ GQ V V+  LVKR K+HF  LP C V  ILGNNGYI+++    G     S E R+++ARV  S++ALD  F+AI PD++MDVY  SI  GV   D+   D +  +
Sbjct:   38 SIRSLHANPFVSPGEVITTESGFLWGHGTKLG--EEDKQLRATVAGFVEQVNKLLTVRPLTQRYAGDIGDVVIGRVTQVGDKRWKVDINSRQDGILMLSSIHLPGGVQRRRTQEDSLQMREFFEEGDLISAEVQNFYHDGAVALHTRSSKYGKLNRGQFVVVRQALVKRCKQHFVTLPDCNVDIILGNNGYIWITESSDGSGAGESAERRQQMARVRQSIVALDRMFVAIFPDSVMDVYHDSIDLGVSPADITHRDYIHRV 296          
BLAST of Gvermi8814.t1 vs. uniprot
Match: A0A2R6X4H9_MARPO (Ribosomal RNA-processing protein 4 n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X4H9_MARPO)

HSP 1 Score: 219 bits (557), Expect = 2.720e-66
Identity = 131/266 (49.25%), Postives = 166/266 (62.41%), Query Frame = 0
Query:   37 GAVIPT--EDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEQRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELP-CGVHTILGNNGYIFLSSMQKGPPSV----------------------------EMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDM 271
            G  IP   E+  +R  GT   Q   G +L AT  GV+ RVNKLV V PLRARY PETGDVVVGRV EVA KR+K+DVNS + A L+L+A+NLPGG+QRRR   DELNMR  F E DL+SAEVQ   +DG++ LHTRS++YGKL  GQLV V   L+KR K+HFH+L   GV  ILG NGY+++S++ +  P +                            E+R RI R++N V  L +    I PD+I+D YE S+S G E+K M
Sbjct:   43 GDTIPVDYENGYLRGHGT---QVVDGQLL-ATVCGVVERVNKLVSVRPLRARYNPETGDVVVGRVTEVAPKRWKVDVNSRQDAQLMLSAVNLPGGIQRRRTATDELNMRDLFTENDLISAEVQTLHQDGSLHLHTRSLKYGKLESGQLVKVAPYLIKRLKQHFHQLKQYGVQMILGCNGYVWISALPQSTPDIATDQKRANTESLEAAAGTADSQNVEISRELRERICRLANVVRVLGACGFLIHPDSIVDTYEASLSWGTELKHM 304          
BLAST of Gvermi8814.t1 vs. uniprot
Match: A9UXQ8_MONBE (Ribosomal RNA-processing protein 4 (Fragment) n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UXQ8_MONBE)

HSP 1 Score: 217 bits (552), Expect = 2.770e-66
Identity = 122/267 (45.69%), Postives = 169/267 (63.30%), Query Frame = 0
Query:   33 VTSPGAVIPTEDHSVRARGTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQE-QRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHELPCGVHTILGNNGYIFL------------SSMQKGPPSVEMRRRIARVSNSVLALDSEFIAIGPDTIMDVYETSISNGVEVKDMCRPDVMRSICVGARS 286
            +  PGA I +E   +R  GT L       VL A+ AGV+  VNK+V V P R RY+ E GDVVVGR+VEV+ +R+K+D+ S  H  L L+++NLPGGV RR++  DEL MR++FKEGDL+SAEVQ+  ++DGT++LHTRS+RYG+L GG  V+V   L++R+K H H LPCGV  +LG NG+I++            +S     P  +MR RIARV N + AL +    I   +I+  YE S  +   VKD+ +PDV+  +   A S
Sbjct:    2 IVVPGATITSETGFMRGHGTFLED----EVLYASVAGVVEHVNKVVSVRPARTRYVGEVGDVVVGRIVEVSQRRWKVDIQSRLHGVLKLSSVNLPGGVLRRKSASDELMMREFFKEGDLISAEVQQIYQEDGTLSLHTRSLRYGRLGGGAFVAVSPALIRRSKHHMHVLPCGVAVVLGTNGFIWIGPRLEEDTTRRDASADAMGPDRDMRLRIARVRNCIEALATRHCPIFETSIVYTYEDSQEH--HVKDLLQPDVVYEVTARAYS 262          
The following BLAST results are available for this feature:
BLAST of Gvermi8814.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITR4_9FLOR1.050e-16882.94Exosome complex component RRP4 n=1 Tax=Gracilariop... [more]
R7Q340_CHOCR2.390e-12469.29KH_dom_type_1 domain-containing protein n=1 Tax=Ch... [more]
A0A2V3IQJ5_9FLOR7.830e-11564.36Exosome complex component RRP4 n=1 Tax=Gracilariop... [more]
A0A2V3IW84_9FLOR4.200e-11264.91Exosome complex component RRP4 n=1 Tax=Gracilariop... [more]
A0A2V3IDP5_9FLOR1.570e-8075.43Exosome complex component rrp4 n=5 Tax=Gracilariop... [more]
M2XZF0_GALSU7.280e-7747.91Ribosomal RNA-processing protein 4 n=1 Tax=Galdier... [more]
A0A1X6NNN7_PORUM8.990e-7746.86KH_dom_type_1 domain-containing protein n=1 Tax=Po... [more]
A0A3P3YCJ4_PLABS5.340e-7350.19Ribosomal RNA-processing protein 4 n=2 Tax=Plasmod... [more]
A0A2R6X4H9_MARPO2.720e-6649.25Ribosomal RNA-processing protein 4 n=1 Tax=Marchan... [more]
A9UXQ8_MONBE2.770e-6645.69Ribosomal RNA-processing protein 4 (Fragment) n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 90..170
e-value: 0.0022
score: 27.3
IPR004088K Homology domain, type 1PFAMPF15985KH_6coord: 180..219
e-value: 4.1E-9
score: 36.8
NoneNo IPR availableGENE3D2.40.50.100coord: 33..87
e-value: 5.0E-15
score: 56.8
NoneNo IPR availableGENE3D2.40.50.140coord: 88..178
e-value: 1.1E-21
score: 78.6
NoneNo IPR availablePANTHERPTHR21321:SF4EXOSOME COMPLEX COMPONENT RRP4coord: 25..277
NoneNo IPR availableCDDcd05789S1_Rrp4coord: 86..177
e-value: 2.39433E-25
score: 94.5385
IPR026699Exosome complex RNA-binding protein 1/RRP40/RRP4PANTHERPTHR21321PNAS-3 RELATEDcoord: 25..277
IPR003029S1 domainPROSITEPS50126S1coord: 92..170
score: 9.581787
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 85..177
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 180..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:173002..173877 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8814.t1Gvermi8814.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 173002..173877 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8814.t1 ID=Gvermi8814.t1|Name=Gvermi8814.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=292bp
MDVDTHSSLAIFRPRRVSDNSDDAVQRLAHVPVTSPGAVIPTEDHSVRAR
GTLLTQTEAGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVV
EVANKRYKIDVNSTKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGD
LVSAEVQEQRKDGTVALHTRSMRYGKLSGGQLVSVQSELVKRAKKHFHEL
PCGVHTILGNNGYIFLSSMQKGPPSVEMRRRIARVSNSVLALDSEFIAIG
PDTIMDVYETSISNGVEVKDMCRPDVMRSICVGARSMRDAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR004088KH_dom_type_1
IPR026699Exosome_RNA_bind1/RRP40/RRP4
IPR003029S1_domain
IPR012340NA-bd_OB-fold
IPR036612KH_dom_type_1_sf