Gvermi8812.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8812.t1
Unique NameGvermi8812.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length720
Homology
BLAST of Gvermi8812.t1 vs. uniprot
Match: A0A2V3IM95_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM95_9FLOR)

HSP 1 Score: 591 bits (1523), Expect = 3.180e-200
Identity = 349/692 (50.43%), Postives = 440/692 (63.58%), Query Frame = 0
Query:   33 RRPGRPPTYVFSRPDHELSENERRLKGSVIKRRIRQNRSYHRKKQLRQLKAAE----AHTADRDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAHTASRDCNFQFTPASAPDYSSHVFTPPTAPLPPEPHVPSLPADPLNAALLQNPRP-PIPFLSSLXSVPPLNPAPFSSSAAFNETPAVMLPASPSQHLPQMYNSSSHQHIPTEAELDISNRRSLSNSNTMVRSAANRPVLAAQLSTRMAALSIDDSCLSKLLIFPSTFDAPSALAVLNARLDDAPALLSSLVDTNLLSVQPGGRYVMNPIARELLAEHQAWNQPDVQTTFVHNFAQKLLSFGPERLHCDGAQRQVAMKLYDQERANMNIALQLSQSLHTPTEPLLFHFLSVAATVMRYSVPASARVQIFCSALRLPCPATSRRVQARLRLALGEAYLDMLSLSSAKQHLEAAIADLAMHQSSNDSDLSNMLALLLLAELRASEREFEHAKNLLHQVLQSMHNRSMKRSSYAACCLLTLASVYSAMHEEGKALCAVTTAIDVLVAVKFERMPIYADALRVLGCVHLRMGDVDKGQKAFLEGLQIVRDWNARPDWDHAPFQHCTHLDVFLFESLAWTFVKQDRMGDAEALFGHAKSLRRMRNLDETRSVNPFEDAPHPGGPSRGDGSHTTWLYTRHLY 719
            R+PGRPPTYVFS+PDHELSENERRLKGSVIKRRIRQNRSYHRKK+ RQL+A      AHT    A                                                   +H AS        P + P YS+ + +  TA  PP   +P L   P +  L  +P P P+PF        P  P+P +S+A   + P    P      LP    +++H  + ++A LD+S + +L+  N ++  A+NRP+L AQL+ R A L ID + L  LL+FPS+F   SALA+L       P+++ S+VD N+LS  P GRY+++P+ R LL+E    + P VQ  FVH+F  +L +F   +L CDGA RQ+AMK YDQE +NM  ALQL+++LH+ ++PLL+HFLSVAATVMRYSVPA AR+ IF +AL    P+T +  QARLRLALGEAYLD LS + AK HLE A+ADLA+H+S +D+DL ++LALLLLAE RASE EFE++K LL Q LQSM +  M+RSS+AACCLLTL+SVY A++EE KAL AVT AI +LVAVKFERMPIYADALR LGCV  RMG V++ QK F + L IV+DW ARPDW  AP QHC HLDVFL E +AWTFVKQ+ M DAE LF  AK+ RR R LDET  V+P ED  H  G +         +YTRHLY
Sbjct:   75 RKPGRPPTYVFSKPDHELSENERRLKGSVIKRRIRQNRSYHRKKRQRQLQAETSARLAHTVPTTAHSSLPNPLS------------------------------------------SHHAS-------LPPAPPPYSAPMHS--TAVHPPSGAIPPLSTLPSSFPLSHSPFPAPLPF-------DPPAPSPTASAAQLLQQPPSSSPPLNQPPLPGHAPAAAHSAL-SDAVLDVSYQSTLTKPNNILN-ASNRPLLTAQLTARTATLPIDPTSLPNLLLFPSSFQPDSALAMLGLSHSQNPSVIQSMVDANILSTVPSGRYILHPVTRALLSEQHTSHPPHVQQAFVHHFINRLRAFNAHQLTCDGAHRQLAMKEYDQEHSNMETALQLAETLHSCSQPLLYHFLSVAATVMRYSVPAYARLDIFHNALERSFPSTVKTDQARLRLALGEAYLDQLSFAPAKDHLEVALADLAIHRSRDDTDLHSILALLLLAEFRASEHEFENSKRLLTQALQSMRDGPMQRSSFAACCLLTLSSVYCALNEENKALVAVTRAIGILVAVKFERMPIYADALRALGCVRFRMGQVNEAQKQFTQALHIVQDWKARPDWQQAPVQHCVHLDVFLIELIAWTFVKQNMMNDAETLFQQAKAQRRARQLDETTCVDPSEDLAHLSGTNSKHRERKASIYTRHLY 706          
BLAST of Gvermi8812.t1 vs. uniprot
Match: A0A2V3IDM7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDM7_9FLOR)

HSP 1 Score: 162 bits (410), Expect = 3.770e-38
Identity = 199/762 (26.12%), Postives = 314/762 (41.21%), Query Frame = 0
Query:   11 SPHDAHAAGEQIPSPSQPQQHRRRPGRPPTYVFSRPDHELSENERRLKGSVIKRRIRQNRSYHRKKQLRQLKAAEAHTADRDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAHTASRDCNFQFTPASAPDYSSHVFTPPTAPLPPEPHVPSLPADPLNAALLQNPRPPIPFLSSLXS-VPPLNPAPFSSSAAFNETP---------AVMLPASPSQHLPQMYNSSSHQHIPTEA----ELDISNRRSLSNSNTMVRSAANRPV---------LAAQLSTRMAALSIDD-------------SCLSKLLIFPSTFDAPSALAVLNARLDDA---PALLSSLVDTNLLSVQPGGRYVMNPIARELLAE-------HQAWNQPDV-QTTFVHNFAQKLLSFGPERLHCDGAQRQVAMKLYDQERANMNIALQLSQSLHTPTEPLLFHFLSVAATVMRYSVPASARVQIFCSAL-------------------------------------RLPCPATSRRVQARLRLALGEAYLDMLSLSSAKQHLEAAI---ADLAMHQSSNDSDLSN-MLALLLLAELRASEREFEHAKNLLHQVLQSMHNRSMKRSSYAACCLLTLASVYSAMHEEGKALCAVTTAIDVLVAVKFERMPIYADALRVLGCVHLRMGDVDKGQKAFLEGLQIVRDWNARPDWDHAPFQHCTHLDVFLFESLAWTFVKQDRMGDAEALFGHAKSLRRMRNL 684
            +P   H   +  P+P +P+   RRPGRP TYVF +PDH L+E ER+ K ++ KRR+RQNRSYHR+K  R  +   A ++ +                                                    +   A +       P+    +S +    P   L P  ++PSL                I  +SSL S   P +P+P  S  A + TP         A M   SP Q L   ++  +   I +++    +  ++  + +S++  + RS     V         L  +  T + ++  D+             S +   +IFP TF+  +A +V     D+      +L +++  N + +   GRY +N  AR  L E       + A +  DV Q  F+ ++  +L     + +H  G  R+ AM LYD ER NM  A  L    +      L  FL+   TVMRY V A+ R ++   AL                                     R PC   ++   ARL+LAL EAY D L    A++ L  A+    DL  +  +  S + N +L LLLL+ +R ++   + A+ L  + L+ + +  + RS++    +  L ++Y       KA       +D L  +++  MPIYADAL V   V L   D  + ++ F   L+ V  W ++ DW   P QHC  LD++L E LA    KQ R+ +A  L   A   R++R L
Sbjct:    9 APPIPHPPADPQPTPQRPRH--RRPGRPATYVFDKPDHLLTEKERKHKIAIEKRRLRQNRSYHRRKAQRNAQRLAAPSSPQ----------------------------------------------------VVPQAPQSSQPILPPSLIAGFSQN----PLELLAPSLNLPSLTXXXXXXXXXXXXXXXIDAISSLLSFATPSSPSPNHSRDAVSFTPLGPVDANLDATMTSPSP-QPLTTAFSFDTSAVIASDSLPPEDDQVATDKLVSSALAVARSYGKDTVNLKYAVGQELDLRRMTEIKSIVFDNLRSKYLTMQSTVQSAVRHFVIFPRTFNLRAAASVAGLDEDNLVIMQGMLDNMIQANFI-ITSKGRYELNDAARLFLNEDPTVFSHNLASSTYDVAQDRFIQHYKTQLSRLQDDNIHRVGWVREEAMALYDSERENMEFAEYLLNGRNEQ----LRQFLTAGITVMRYCVSAANRERVLRKALSDDETSTEDNIITLITEXXXXXXXXXXXXXXXXXXXKRGPCDKNNK---ARLQLALSEAYFDQLKTRDAEKPLLQALKLMGDLTPNCGTPASAIVNSVLVLLLLSNVRLNQNRIKDARILCVKALRILADAGLGRSTFGINAMSNLVTIYLTDGLLDKAKSVANKLLDTLNTMRYSGMPIYADALGVCAMVSLAEKDYHEAERQFGTALETVGKWGSK-DWSGIPVQHCLDLDLWLMEGLAEAIRKQGRVDEALVLDERAVEDRKLRGL 702          
BLAST of Gvermi8812.t1 vs. uniprot
Match: M2Y860_GALSU (TPR_MalT domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y860_GALSU)

HSP 1 Score: 117 bits (292), Expect = 2.380e-23
Identity = 102/434 (23.50%), Postives = 194/434 (44.70%), Query Frame = 0
Query:  301 LSKLLIFPSTFDAPSALAVLNARLDDA---PALLSSLVDTNLLSVQPGGRYVMNPIARELLAE----HQAWNQPDV----QTTFVHNFAQKLLSFGPERLHCDGAQRQVAMKLYDQERANMNIALQLSQSLHTPTEPLLFHFLSVAATVMRYSVPASARVQIFCSALRLP-----CPATSRRV------------------------QARLRLALGEAYLDMLSLSSAKQHLEAAIADLAMHQSSNDSDLSNMLALLLLAELRASEREFEHAKNLLHQVLQSMHNRSMKRSSYAACCLLTLASVYSAMHEEGKALCAVTTAIDVLVAVKFERMPIYADALRVLGCVHLRMGDVDKGQKAFLEGLQIVRDWNARPDWDHAPFQHCTHLDVFLFESLAWTFVKQDRMGDAEALFGHAKSLRRMRNLDETRSVNPFE 694
            L KL +FP TFD  +A A+++    ++    ++LS+L +   +      R  ++ +++E L      H  +N  +V    +  FV  +   L     ER+  DGA  + A+++ D ER N  + L  +Q L       L H +   + V+R  +PAS R+ +  S L L      C +++ ++                         A L ++LGEAY D L    A+Q L  ++    + QS  ++    ++ L++LA +       EHA N+L + L+ +    ++ SSY       +A      +E  +A   ++    +  +++FE +P+Y D L   G   L   D++  +  F   L+    + +RP W  AP + C  LD+++ ++L+   +  D+   A  +    + + R+R +    S++ F+
Sbjct:  327 LFKLSVFPETFDVAAAKAIIHDSCIESCSEESMLSTLNERGFIVKVSPKRLQLDLLSKEFLLREVGAHDDFNDWEVIRVAKKNFVSYYTNLLKLIDNERMILDGANMEQALRICDLERMNFEMCLLFAQELGRQA---LRHTIIAGSNVLRLFIPASDRISLISSILDLSRYEQTCSSSNLKLAGTGDSHETDILLGDSSLLENQQEDAMLLISLGEAYSDDLHFREAEQALCQSLQ--LLEQSGMNNKPCILIPLIVLANICRETDRTEHALNILRRTLKKLSEFHLENSSYGISVYENMALTLLVRNEREEARQCLSKVTKLAESIRFEGLPLYTDILGTCGIFSLVFKDIETAEGYFRRALENYGSFISRP-WSRAPIESCRDLDLWILDNLSKALMLLDKTSGASLIQEQIEMIARIRGV-RVCSIDSFD 753          
BLAST of Gvermi8812.t1 vs. uniprot
Match: A0A6T6LM98_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6LM98_9RHOD)

HSP 1 Score: 84.0 bits (206), Expect = 5.010e-15
Identity = 59/189 (31.22%), Postives = 93/189 (49.21%), Query Frame = 0
Query:  535 LLHQVLQSMHNRSMKRSSYAACCLLTLASVYSAMHEEGKALCAVTTAIDVLVAVKFERMPIYADALRVLGCVHLRMGDVDKGQKAFLEGLQIVRDWNARPDWDHAPFQHCTHLDVFLFESLAWTFVKQDRMGDAE---ALFGHAKSLRRMRNLDETRSVNPFEDAPHPGGPSRGDGSHTTWLYT-RHLY 719
            LL + L+ ++   + +++ A   L  L ++Y    +  +A    T  ++ L A+++++MPIYADAL VL  V +  GD     + F  GL+IV  W ++  W   P QHC  LD++L E LA +   Q    DA+    L   A+  RR+++L  T  +              G+    TWL T RHLY
Sbjct:    4 LLVEALRILNKIGLGKTTLAVNALTNLVTIYVQRGQLDRANYVATELLNTLHAMRYDKMPIYADALGVLAMVRMAAGDYTDAARQFGSGLEIVAGWGSK-SWTSVPVQHCLDLDIWLMEGLAISLNLQGLEKDAKYMVTLASDARLSRRLKSL--TYDI------------LGGEHVVPTWLTTSRHLY 177          
BLAST of Gvermi8812.t1 vs. uniprot
Match: A0A7S0G253_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G253_9RHOD)

HSP 1 Score: 66.6 bits (161), Expect = 1.270e-8
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 0
Query:   33 RRPGRPPTYVFSRPDHELSENERRLKGSVIKRRIRQNRSYHRKKQLRQL-KAAEAHTAD 90
            RRPGRP TY+F RPD EL+E +R+LK +V+KRR RQNRSY R+K ++   K A   T D
Sbjct:   20 RRPGRPATYIFDRPDDELTEEDRKLKNAVLKRRSRQNRSYQRRKMMKLAQKKANGQTVD 78          
BLAST of Gvermi8812.t1 vs. uniprot
Match: A0A1X6NZQ9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZQ9_PORUM)

HSP 1 Score: 68.6 bits (166), Expect = 3.710e-8
Identity = 31/42 (73.81%), Postives = 37/42 (88.10%), Query Frame = 0
Query:   32 RRRPGRPPTYVFSRPDHELSENERRLKGSVIKRRIRQNRSYH 73
            +RRPGRP TYVF +PD EL+ENERRLK ++ KRR+RQNRSYH
Sbjct:   34 KRRPGRPATYVFDKPDEELNENERRLKRAIEKRRLRQNRSYH 75          
BLAST of Gvermi8812.t1 vs. uniprot
Match: A0A5J4Z1G7_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1G7_PORPP)

HSP 1 Score: 63.2 bits (152), Expect = 1.580e-6
Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 0
Query:   32 RRRPGRPPTYVFSRPDHELSENERRLKGSVIKRRIRQNRSYHRKKQLRQ 80
            +R+ GRP  YVF RPD EL+E ER+LK S++KRR RQN+SYHRK+ L Q
Sbjct:    7 KRKAGRPQMYVFDRPDAELTEAERKLKSSILKRRQRQNQSYHRKRALLQ 55          
The following BLAST results are available for this feature:
BLAST of Gvermi8812.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IM95_9FLOR3.180e-20050.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IDM7_9FLOR3.770e-3826.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
M2Y860_GALSU2.380e-2323.50TPR_MalT domain-containing protein n=1 Tax=Galdier... [more]
A0A6T6LM98_9RHOD5.010e-1531.22Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0G253_9RHOD1.270e-857.63Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A1X6NZQ9_PORUM3.710e-873.81Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z1G7_PORPP1.580e-663.27Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 394..695
e-value: 1.6E-13
score: 52.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 509..671
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 688..707
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:112208..114367 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8812.t1Gvermi8812.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 112208..114367 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8812.t1 ID=Gvermi8812.t1|Name=Gvermi8812.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=720bp
MSSLACMCPYSPHDAHAAGEQIPSPSQPQQHRRRPGRPPTYVFSRPDHEL
SENERRLKGSVIKRRIRQNRSYHRKKQLRQLKAAEAHTADRDATNADRDA
TNADRDATNADRDATNADRDATNADRDATNTDRDATNADRDATIAHTASR
DCNFQFTPASAPDYSSHVFTPPTAPLPPEPHVPSLPADPLNAALLQNPRP
PIPFLSSLPSVPPLNPAPFSSSAAFNETPAVMLPASPSQHLPQMYNSSSH
QHIPTEAELDISNRRSLSNSNTMVRSAANRPVLAAQLSTRMAALSIDDSC
LSKLLIFPSTFDAPSALAVLNARLDDAPALLSSLVDTNLLSVQPGGRYVM
NPIARELLAEHQAWNQPDVQTTFVHNFAQKLLSFGPERLHCDGAQRQVAM
KLYDQERANMNIALQLSQSLHTPTEPLLFHFLSVAATVMRYSVPASARVQ
IFCSALRLPCPATSRRVQARLRLALGEAYLDMLSLSSAKQHLEAAIADLA
MHQSSNDSDLSNMLALLLLAELRASEREFEHAKNLLHQVLQSMHNRSMKR
SSYAACCLLTLASVYSAMHEEGKALCAVTTAIDVLVAVKFERMPIYADAL
RVLGCVHLRMGDVDKGQKAFLEGLQIVRDWNARPDWDHAPFQHCTHLDVF
LFESLAWTFVKQDRMGDAEALFGHAKSLRRMRNLDETRSVNPFEDAPHPG
GPSRGDGSHTTWLYTRHLY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf